hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-06511682/chunk_1/iprscan-20080812-06511682.nocrc
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Query sequence: hh01845
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04379.5.ls Protein of unknown function (DUF525)           271.6    1.4e-78   1
PF04379.5.fs Protein of unknown function (DUF525)           269.6    5.7e-78   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04379.5.fs   1/1     253   379 ..     1   138 []   269.6  5.7e-78
PF04379.5.ls   1/1     253   379 ..     1   138 []   271.6  1.4e-78

Alignments of top-scoring domains:
PF04379.5.fs: domain 1 of 1, from 253 to 379: score 269.6, E = 5.7e-78
                   *->rattrdIeVrVspfYlpeqSnpeeqrYvfaYtItIeNSlmPEGCiLN
                      +att+dI+V+Vs+++lpe S++++++Y+f+Y+I+Ie+S++       
     hh01845   253    VATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKD------- 292  

                   glgevsvQLlsRhWrITdgnGrveeVrGeGVVGeQPlLsPGeeeyqYtSg
                   +l+e+++QL+sR+WrIT+++G+veeV+G+GVVGe+P++sPG ++y+YtS+
     hh01845   293 ALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPG-RVYEYTSC 341  

                   vsLdTpsGsMqGhYTFVPgqMldedGetFdVaIPpFsLavP<-*
                   ++++T+sG+M+G+YT   +++l++++++F+VaIP+F++a+P   
     hh01845   342 TTFSTTSGYMEGYYT---FHFLYFKDKIFNVAIPRFHMACP    379  

PF04379.5.ls: domain 1 of 1, from 253 to 379: score 271.6, E = 1.4e-78
                   *->rattrdIeVrVspfYlpeqSnpeeqrYvfaYtItIeNSlmPEGCiLN
                      +att+dI+V+Vs+++lpe S++++++Y+f+Y+I+Ie+S++       
     hh01845   253    VATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKD------- 292  

                   glgevsvQLlsRhWrITdgnGrveeVrGeGVVGeQPlLsPGeeeyqYtSg
                   +l+e+++QL+sR+WrIT+++G+veeV+G+GVVGe+P++sPG ++y+YtS+
     hh01845   293 ALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPG-RVYEYTSC 341  

                   vsLdTpsGsMqGhYTFVPgqMldedGetFdVaIPpFsLavP<-*
                   ++++T+sG+M+G+YT   +++l++++++F+VaIP+F++a+P   
     hh01845   342 TTFSTTSGYMEGYYT---FHFLYFKDKIFNVAIPRFHMACP    379  

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