hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-07453726/chunk_1/iprscan-20080812-07453726.nocrc
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Query sequence: hh02890
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.ls EF hand                                         54.4    3.5e-13   2
PF00036.22.fs EF hand                                         50.4    1.1e-12   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   1/2     207   235 ..     1    29 []    27.9  1.5e-06
PF00036.22.ls   1/2     207   235 ..     1    29 []    29.9  8.3e-06
PF00036.22.fs   2/2     243   271 ..     1    29 []    22.5  4.3e-05
PF00036.22.ls   2/2     243   271 ..     1    29 []    24.5  0.00034

Alignments of top-scoring domains:
PF00036.22.fs: domain 1 of 2, from 207 to 235: score 27.9, E = 1.5e-06
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +l+ +Fk++D+ +DG+I++ E+k +++kl   
     hh02890   207    DLESMFKLYDAGRDGFIDLMELKLMMEKL    235  

PF00036.22.ls: domain 1 of 2, from 207 to 235: score 29.9, E = 8.3e-06
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +l+ +Fk++D+ +DG+I++ E+k +++kl   
     hh02890   207    DLESMFKLYDAGRDGFIDLMELKLMMEKL    235  

PF00036.22.fs: domain 2 of 2, from 243 to 271: score 22.5, E = 4.3e-05
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       lk ++ke+D D DGk+sf Ef+ +++k    
     hh02890   243    GLKSMIKEVDEDFDGKLSFREFLLIFHKA    271  

PF00036.22.ls: domain 2 of 2, from 243 to 271: score 24.5, E = 0.00034
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       lk ++ke+D D DGk+sf Ef+ +++k    
     hh02890   243    GLKSMIKEVDEDFDGKLSFREFLLIFHKA    271  

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