hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-07515384/chunk_1/iprscan-20080812-07515384.nocrc
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Query sequence: hh03137
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                 209.9    2.3e-58   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/3     135   209 ..     1   121 []    86.2  3.9e-21
SM00360    2/3     216   293 ..     1   121 []    43.7  2.5e-08
SM00360    3/3     311   376 ..     1   121 []    80.0  2.9e-19

Alignments of top-scoring domains:
SM00360: domain 1 of 3, from 135 to 209: score 86.2, E = 3.9e-21
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                       +fVg +  p d  e++L  lF              +k G++ + r+
     hh03137   135    EIFVGKI--PRDLFEDELVPLF--------------EKAGPIWDLRL 165  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++d+                      TG ++G+aFV+F ++e+A+ A  +
     hh03137   166 MMDPL---------------------TGLNRGYAFVTFCTKEAAQEA--V 192  

                   ealnaskGkeledgGrptlglrVe<-*
                   +++n   ++e+ + G++   + V    
     hh03137   193 KLYN---NHEI-RSGKH---IGVC    209  

SM00360: domain 2 of 3, from 216 to 293: score 43.7, E = 2.5e-08
                   *->tlfVgNLndppdvteedLrelF.kevksvevfraeteskfGkvvsvr
                      +lfVg +  p++ t+e++ e F+k                G +++v 
     hh03137   216    RLFVGSI--PKSKTKEQILEEFsK-------------VTEG-LTDVI 246  

                   ivrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAll
                   + + +d                    +++k++Gf+F e+ed+  A++A+ 
     hh03137   247 LYHQPD--------------------DKKKNRGFCFLEYEDHKTAAQAR- 275  

                   iealnaskGkeledgGrptlglrVe<-*
                    +++   ++ ++   G+     +Ve   
     hh03137   276 RRLMS--GKVKV--WGNV---GTVE    293  

SM00360: domain 3 of 3, from 311 to 376: score 80.0, E = 2.9e-19
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +lfV+NL    +vtee L+++F              s+fGk+++v+ 
     hh03137   311    VLFVRNL--ANTVTEEILEKAF--------------SQFGKLERVKK 341  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++d                             +aF++F++++ A kA  +
     hh03137   342 LKD-----------------------------YAFIHFDERDGAVKA--M 360  

                   ealnaskGkeledgGrptlglrVe<-*
                   e++n   Gk+l  +G     +++    
     hh03137   361 EEMN---GKDL--EGEN---IEIV    376  

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