hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-08101541/chunk_1/iprscan-20080812-08101541.nocrc
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Query sequence: hh03581
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07716.5.fs Basic region leucine zipper                     32.2    7.6e-08   1
PF07716.5.ls Basic region leucine zipper                     34.2    4.4e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07716.5.fs   1/1      42    93 ..     1    57 []    32.2  7.6e-08
PF07716.5.ls   1/1      42    93 ..     1    57 []    34.2  4.4e-07

Alignments of top-scoring domains:
PF07716.5.fs: domain 1 of 1, from 42 to 93: score 32.2, E = 7.6e-08
                   *->kddeyrdrRrlrNneAAkrsReKkKqreeeleervkeLeeeNaqLLk
                       d + + +R    +++A+ +R +kK+r ++lee v   e+ +++L  
     hh03581    42    IDLKAKLERS---RQSARECRARKKLRYQYLEELVSSRERAICAL-- 83   

                   rqkveqLekE<-*
                   r+++e+ +++   
     hh03581    84 REELEMYKQW    93   

PF07716.5.ls: domain 1 of 1, from 42 to 93: score 34.2, E = 4.4e-07
                   *->kddeyrdrRrlrNneAAkrsReKkKqreeeleervkeLeeeNaqLLk
                       d + + +R    +++A+ +R +kK+r ++lee v   e+ +++L  
     hh03581    42    IDLKAKLERS---RQSARECRARKKLRYQYLEELVSSRERAICAL-- 83   

                   rqkveqLekE<-*
                   r+++e+ +++   
     hh03581    84 REELEMYKQW    93   

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