# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohh03691.fasta.nr -Q hh03691.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hh03691, 360 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6840117 sequences Expectation_n fit: rho(ln(x))= 5.4923+/-0.000185; mu= 9.7492+/- 0.010 mean_var=83.3768+/-16.337, 0's: 43 Z-trim: 58 B-trim: 0 in 0/65 Lambda= 0.140460 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|26400672|sp|Q96F44|TRI11_HUMAN Tripartite motif ( 468) 2233 461.9 1.1e-127 gi|189069463|dbj|BAG37129.1| unnamed protein produ ( 468) 2227 460.7 2.5e-127 gi|193783624|dbj|BAG53535.1| unnamed protein produ ( 395) 2209 457.0 2.7e-126 gi|109017929|ref|XP_001082465.1| PREDICTED: simila ( 468) 2209 457.0 3.1e-126 gi|194377874|dbj|BAG63300.1| unnamed protein produ ( 318) 2134 441.7 8.6e-122 gi|169642491|gb|AAI60894.1| Trim11 protein [Rattus ( 467) 2035 421.7 1.3e-115 gi|119590277|gb|EAW69871.1| tripartite motif-conta ( 468) 2016 417.9 1.8e-114 gi|117306598|gb|AAI26549.1| Tripartite motif-conta ( 468) 2006 415.9 7.4e-114 gi|26400680|sp|Q99PQ2|TRI11_MOUSE Tripartite motif ( 467) 2003 415.3 1.1e-113 gi|73975418|ref|XP_848259.1| PREDICTED: similar to ( 468) 1995 413.6 3.5e-113 gi|194220204|ref|XP_001918325.1| PREDICTED: simila ( 527) 1993 413.3 5.1e-113 gi|149052758|gb|EDM04575.1| tripartite motif prote ( 317) 1844 382.9 4.2e-104 gi|114573064|ref|XP_514256.2| PREDICTED: tripartit ( 469) 1817 377.6 2.5e-102 gi|148675744|gb|EDL07691.1| tripartite motif prote ( 343) 1812 376.5 4e-102 gi|73975416|ref|XP_539324.2| PREDICTED: similar to ( 486) 1413 295.7 1.1e-77 gi|148675743|gb|EDL07690.1| tripartite motif prote ( 359) 1403 293.6 3.7e-77 gi|18043336|gb|AAH20102.1| Trim11 protein [Mus mus ( 483) 1403 293.7 4.6e-77 gi|15079622|gb|AAH11629.1| TRIM11 protein [Homo sa ( 202) 1394 291.6 8.4e-77 gi|149052757|gb|EDM04574.1| tripartite motif prote ( 202) 1288 270.1 2.4e-70 gi|73975414|ref|XP_855630.1| PREDICTED: similar to ( 202) 1259 264.2 1.4e-68 gi|194223821|ref|XP_001489774.2| PREDICTED: simila ( 450) 1019 215.9 1.2e-53 gi|7438476|pir||T12494 hypothetical protein DKFZp4 ( 438) 992 210.4 5.1e-52 gi|22760588|dbj|BAC11254.1| unnamed protein produc ( 385) 980 207.9 2.5e-51 gi|76622798|ref|XP_603937.2| PREDICTED: similar to ( 487) 979 207.8 3.4e-51 gi|109019698|ref|XP_001086222.1| PREDICTED: simila ( 486) 977 207.4 4.5e-51 gi|81889233|sp|Q5NCC9|TRI58_MOUSE Tripartite motif ( 485) 974 206.8 6.9e-51 gi|114573683|ref|XP_524544.2| PREDICTED: tripartit ( 673) 974 206.9 8.8e-51 gi|73975512|ref|XP_539335.2| PREDICTED: similar to ( 517) 971 206.2 1.1e-50 gi|50960027|gb|AAH74748.1| TRIM58 protein [Homo sa ( 350) 968 205.4 1.2e-50 gi|119597611|gb|EAW77205.1| hCG1725381 [Homo sapie ( 486) 968 205.5 1.6e-50 gi|124053416|sp|Q8NG06|TRI58_HUMAN Tripartite moti ( 486) 968 205.5 1.6e-50 gi|109488162|ref|XP_220473.4| PREDICTED: similar t ( 485) 952 202.3 1.5e-49 gi|21591225|gb|AAM63958.1|AF327057_1 BIA2 protein ( 342) 938 199.3 8.2e-49 gi|338490|gb|AAA36651.1| 52-kD SS-A/Ro autoantigen ( 475) 895 190.7 4.5e-46 gi|14994115|gb|AAK76432.1|AF391283_1 SSA1 [Homo sa ( 475) 895 190.7 4.5e-46 gi|133250|sp|P19474|RO52_HUMAN 52 kDa Ro protein ( ( 475) 895 190.7 4.5e-46 gi|109107688|ref|XP_001112712.1| PREDICTED: 52kD R ( 475) 883 188.3 2.4e-45 gi|149412073|ref|XP_001509541.1| PREDICTED: simila ( 527) 881 187.9 3.4e-45 gi|73975434|ref|XP_539323.2| PREDICTED: similar to ( 513) 871 185.9 1.4e-44 gi|53690156|gb|AAU89982.1| Sjogren syndrome antige ( 475) 870 185.7 1.5e-44 gi|149414780|ref|XP_001516756.1| PREDICTED: hypoth (1149) 870 186.0 2.9e-44 gi|126309020|ref|XP_001364471.1| PREDICTED: simila ( 565) 863 184.3 4.6e-44 gi|126309495|ref|XP_001368421.1| PREDICTED: simila ( 487) 861 183.9 5.4e-44 gi|194044177|ref|XP_001926857.1| PREDICTED: tripar ( 468) 852 182.0 1.8e-43 gi|149630613|ref|XP_001521491.1| PREDICTED: simila ( 835) 852 182.2 2.9e-43 gi|149742681|ref|XP_001489779.1| PREDICTED: tripar ( 474) 846 180.8 4.3e-43 gi|119918123|ref|XP_598437.3| PREDICTED: similar t ( 468) 840 179.6 1e-42 gi|149759402|ref|XP_001495092.1| PREDICTED: simila ( 475) 840 179.6 1e-42 gi|73979451|ref|XP_848648.1| PREDICTED: similar to ( 474) 839 179.4 1.2e-42 gi|149731842|ref|XP_001496564.1| PREDICTED: simila ( 464) 836 178.8 1.7e-42 >>gi|26400672|sp|Q96F44|TRI11_HUMAN Tripartite motif-con (468 aa) initn: 2233 init1: 2233 opt: 2233 Z-score: 2447.8 bits: 461.9 E(): 1.1e-127 Smith-Waterman score: 2233; 99.700% identity (100.000% similar) in 333 aa overlap (28-360:136-468) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV .::::::::::::::::::::::::::::: gi|264 ELRLLCAACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCV 110 120 130 140 150 160 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL 170 180 190 200 210 220 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF 230 240 250 260 270 280 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE 290 300 310 320 330 340 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG 350 360 370 380 390 400 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|264 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL 410 420 430 440 450 460 360 hh0369 APQ ::: gi|264 APQ >>gi|189069463|dbj|BAG37129.1| unnamed protein product [ (468 aa) initn: 2227 init1: 2227 opt: 2227 Z-score: 2441.3 bits: 460.7 E(): 2.5e-127 Smith-Waterman score: 2227; 99.399% identity (100.000% similar) in 333 aa overlap (28-360:136-468) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV .::::::::::::::::::::::::::::: gi|189 ELRLLCAACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCV 110 120 130 140 150 160 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL 170 180 190 200 210 220 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|189 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLRPPEVVPMELRTVCRVPGLVETLRRF 230 240 250 260 270 280 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE 290 300 310 320 330 340 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG 350 360 370 380 390 400 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL 410 420 430 440 450 460 360 hh0369 APQ ::: gi|189 APQ >>gi|193783624|dbj|BAG53535.1| unnamed protein product [ (395 aa) initn: 2209 init1: 2209 opt: 2209 Z-score: 2422.6 bits: 457.0 E(): 2.7e-126 Smith-Waterman score: 2209; 98.799% identity (99.399% similar) in 333 aa overlap (28-360:63-395) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV .::::::::::::::::::::::::::::: gi|193 ELRLLCAACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCV 40 50 60 70 80 90 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL 100 110 120 130 140 150 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 AELIAELEDRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF 160 170 180 190 200 210 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::.::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|193 RGDMTLDPDTANPELILSEDRRSVQRGDLRQALSDSPERFDPGPCVLGQERFTSGRHYWE 220 230 240 250 260 270 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG 280 290 300 310 320 330 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL 340 350 360 370 380 390 360 hh0369 APQ ::: gi|193 APQ >>gi|109017929|ref|XP_001082465.1| PREDICTED: similar to (468 aa) initn: 2209 init1: 2209 opt: 2209 Z-score: 2421.5 bits: 457.0 E(): 3.1e-126 Smith-Waterman score: 2209; 98.799% identity (99.700% similar) in 333 aa overlap (28-360:136-468) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV .::::::::::::::::::::::::::::: gi|109 ELRLLCAACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCV 110 120 130 140 150 160 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL :::::::::::::::::::::::::::::::::::::::::::::::::::.::::.::: gi|109 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAARLGQQTAHL 170 180 190 200 210 220 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF 230 240 250 260 270 280 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE 290 300 310 320 330 340 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG 350 360 370 380 390 400 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IFLDYEARHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL 410 420 430 440 450 460 360 hh0369 APQ ::: gi|109 APQ >>gi|194377874|dbj|BAG63300.1| unnamed protein product [ (318 aa) initn: 2015 init1: 2015 opt: 2134 Z-score: 2341.7 bits: 441.7 E(): 8.6e-122 Smith-Waterman score: 2134; 99.687% identity (99.687% similar) in 319 aa overlap (42-360:1-318) 20 30 40 50 60 70 hh0369 ASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQNVL ::::::::::::::::::: :::::::::: gi|194 MQDALLFQAQADETCVLWQ-MVESQRQNVL 10 20 80 90 100 110 120 130 hh0369 GEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELEGRCQLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELEGRCQLP 30 40 50 60 70 80 140 150 160 170 180 190 hh0369 ALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRFRGDVTLDPDTANPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRFRGDVTLDPDTANPE 90 100 110 120 130 140 200 210 220 230 240 250 hh0369 LILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWEVEVGDRTSWALGVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWEVEVGDRTSWALGVC 150 160 170 180 190 200 260 270 280 290 300 310 hh0369 RENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVGIFLDYEAGHLSFYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVGIFLDYEAGHLSFYS 210 220 230 240 250 260 320 330 340 350 360 hh0369 ATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTLAPQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTLAPQ 270 280 290 300 310 >>gi|169642491|gb|AAI60894.1| Trim11 protein [Rattus nor (467 aa) initn: 2035 init1: 2035 opt: 2035 Z-score: 2231.0 bits: 421.7 E(): 1.3e-115 Smith-Waterman score: 2035; 89.489% identity (97.598% similar) in 333 aa overlap (28-360:135-467) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV ...::::::::::::.::.::::::.:::. gi|169 DDLSLLCPTCERSEHWAHRVRPLQEAADDLKGRLEKSLEHLRKQMEDAMLFQAQAEETCA 110 120 130 140 150 160 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL :::::::::::::::::::::::::::::::::.:::::::::::::::::.:::::..: gi|169 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQKLEEEELEVLPRLREGAARLGQQSTQL 170 180 190 200 210 220 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF : :..:::.::::::::::::::::: :::::::::: :::::::::::::::::::::: gi|169 AALVSELESRCQLPALGLLQDIKDALCRVQDVKLQPPAVVPMELRTVCRVPGLVETLRRF 230 240 250 260 270 280 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::.:::::::::::.:::::::::::. ::::::::::::::::::::::.:::::::: gi|169 RGDITLDPDTANPELVLSEDRRSVQRGEQRQALPDSPERFDPGPCVLGQERITSGRHYWE 290 300 310 320 330 340 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG :::::.::::::::.:.:::::::::::::::::::::::.:::.:::..::::::.::: gi|169 VEVGDQTSWALGVCKETVNRKEKGELSAGNGFWILVFLGSFYNSNERAFSPLRDPPKRVG 350 360 370 380 390 400 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL :::::::::::::::::::::::::: :::::::::::::::::::::::: : ::::: gi|169 IFLDYEAGHLSFYSATDGSLLFIFPETPFSGTLRPLFSPLSSSPTPMTICRLIGVSGDTL 410 420 430 440 450 460 360 hh0369 APQ .:: gi|169 GPQ >>gi|119590277|gb|EAW69871.1| tripartite motif-containin (468 aa) initn: 2016 init1: 2016 opt: 2016 Z-score: 2210.2 bits: 417.9 E(): 1.8e-114 Smith-Waterman score: 2016; 99.336% identity (100.000% similar) in 301 aa overlap (60-360:168-468) 30 40 50 60 70 80 hh0369 KLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQNVLGEFERLRRLLAEEEQQLL ..:::::::::::::::::::::::::::: gi|119 SWRSHWSISGSRCRMRCCSKPRRMRPASCGRQMVESQRQNVLGEFERLRRLLAEEEQQLL 140 150 160 170 180 190 90 100 110 120 130 140 hh0369 QRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELEGRCQLPALGLLQDIKDALRRVQDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELEGRCQLPALGLLQDIKDALRRVQDV 200 210 220 230 240 250 150 160 170 180 190 200 hh0369 KLQPPEVVPMELRTVCRVPGLVETLRRFRGDVTLDPDTANPELILSEDRRSVQRGDLRQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KLQPPEVVPMELRTVCRVPGLVETLRRFRGDVTLDPDTANPELILSEDRRSVQRGDLRQA 260 270 280 290 300 310 210 220 230 240 250 260 hh0369 LPDSPERFDPGPCVLGQERFTSGRHYWEVEVGDRTSWALGVCRENVNRKEKGELSAGNGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPDSPERFDPGPCVLGQERFTSGRHYWEVEVGDRTSWALGVCRENVNRKEKGELSAGNGF 320 330 340 350 360 370 270 280 290 300 310 320 hh0369 WILVFLGSYYNSSERALAPLRDPPRRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 WILVFLGSYYNSSERALAPLRDPPRRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGT 380 390 400 410 420 430 330 340 350 360 hh0369 LRPLFSPLSSSPTPMTICRPKGGSGDTLAPQ ::::::::::::::::::::::::::::::: gi|119 LRPLFSPLSSSPTPMTICRPKGGSGDTLAPQ 440 450 460 >>gi|117306598|gb|AAI26549.1| Tripartite motif-containin (468 aa) initn: 2006 init1: 2006 opt: 2006 Z-score: 2199.2 bits: 415.9 E(): 7.4e-114 Smith-Waterman score: 2006; 88.889% identity (96.396% similar) in 333 aa overlap (28-360:136-468) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV ..:::::::::::::.:::::::::.::: gi|117 ELRLLCAACERSGEHWAHRVRPLQDAAEDLKSKLEKSLEHLRKQMEDALLFQAQAEETCS 110 120 130 140 150 160 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL :::::::.:::::: :::::::::.:::: :::::::::::::: :::.::.::::::.: gi|117 LWQKMVETQRQNVLTEFERLRRLLVEEEQLLLQRLEEEELEVLPPLRESAARLGQQSAQL 170 180 190 200 210 220 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF ::::.:::::::::::::::::.:.::::::::::::::::::.:::::::::::.:::: gi|117 AELITELEGRCQLPALGLLQDIRDTLRRVQDVKLQPPEVVPMEMRTVCRVPGLVEALRRF 230 240 250 260 270 280 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::.:::::::::::.::::::::.:::::::::::::::::::::::.: .:::::::: gi|117 RGDMTLDPDTANPELVLSEDRRSVRRGDLRQALPDSPERFDPGPCVLGREPLTSGRHYWE 290 300 310 320 330 340 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG ::::.:.::::::::::.:::::::: :::::::::::::::::::::.::::::::::: gi|117 VEVGERASWALGVCRENANRKEKGELFAGNGFWILVFLGSYYNSSERAFAPLRDPPRRVG 350 360 370 380 390 400 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL :::::::::::::::.:::::. ::: ::::::: :::::::::::::::: ::: :: : gi|117 IFLDYEAGHLSFYSANDGSLLYTFPETPFSGTLRALFSPLSSSPTPMTICRLKGGPGDGL 410 420 430 440 450 460 360 hh0369 APQ ::: gi|117 APQ >>gi|26400680|sp|Q99PQ2|TRI11_MOUSE Tripartite motif-con (467 aa) initn: 2003 init1: 2003 opt: 2003 Z-score: 2196.0 bits: 415.3 E(): 1.1e-113 Smith-Waterman score: 2003; 88.589% identity (96.997% similar) in 333 aa overlap (28-360:135-467) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV ...::::::::::::.::.::::::.:::. gi|264 DDLSLLCPICERSEHWTHRVRPLQEAADDLKGRLEKSLEHLRKQMEDAMLFQAQAEETCA 110 120 130 140 150 160 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL :::::::::::::::::::::::::::::::::.:::::::::::::::::.:::::..: gi|264 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQKLEEEELEVLPRLREGAARLGQQSTQL 170 180 190 200 210 220 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF : ::.:::.::::::::::::::::: :::::::::: :::::::::::::::::::::: gi|264 AALISELESRCQLPALGLLQDIKDALCRVQDVKLQPPAVVPMELRTVCRVPGLVETLRRF 230 240 250 260 270 280 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::.:::::::::::.:::::::::::. ::::::.:::::::::::::::.:::::::: gi|264 RGDITLDPDTANPELVLSEDRRSVQRGEQRQALPDNPERFDPGPCVLGQERITSGRHYWE 290 300 310 320 330 340 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG :::::.::::::::.:..::::::::::::::::::::::.:::.: :..::::::.::: gi|264 VEVGDQTSWALGVCKETANRKEKGELSAGNGFWILVFLGSFYNSNEPAFSPLRDPPKRVG 350 360 370 380 390 400 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL :::::::::::::::::::::::::: ::::::::::::::::::::::: : ::::: gi|264 IFLDYEAGHLSFYSATDGSLLFIFPETLFSGTLRPLFSPLSSSPTPMTICRLIGVSGDTL 410 420 430 440 450 460 360 hh0369 APQ .:: gi|264 GPQ >>gi|73975418|ref|XP_848259.1| PREDICTED: similar to tri (468 aa) initn: 1995 init1: 1995 opt: 1995 Z-score: 2187.2 bits: 413.6 E(): 3.5e-113 Smith-Waterman score: 1995; 88.288% identity (97.297% similar) in 333 aa overlap (28-360:136-468) 10 20 30 40 50 hh0369 GGDRVSGAKGQASVTGLMSHGPAWPLPQAKLEKSLEHLRKQMQDALLFQAQADETCV ..:::::::::::::.:::::::::.:::. gi|739 ELRLLCAACERSGEHWTHRVRPLQDAAEDLKGKLEKSLEHLRKQMEDALLFQAQAEETCA 110 120 130 140 150 160 60 70 80 90 100 110 hh0369 LWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHL ::::::::::::::.::::::::::::::.:::::::::::::: ::..:..::::::.: gi|739 LWQKMVESQRQNVLAEFERLRRLLAEEEQRLLQRLEEEELEVLPPLRDSATRLGQQSAQL 170 180 190 200 210 220 120 130 140 150 160 170 hh0369 AELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRF ::::::::::::::::::::::.:.:::::::::: :::::::..::::::::::.:::: gi|739 AELIAELEGRCQLPALGLLQDIRDTLRRVQDVKLQLPEVVPMEMKTVCRVPGLVEALRRF 230 240 250 260 270 280 180 190 200 210 220 230 hh0369 RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWE :::::::::::::::.::::::::.:::::::::::::::::::::::.: .:::::::: gi|739 RGDVTLDPDTANPELVLSEDRRSVRRGDLRQALPDSPERFDPGPCVLGREPLTSGRHYWE 290 300 310 320 330 340 240 250 260 270 280 290 hh0369 VEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGSYYNSSERALAPLRDPPRRVG ::::.:.:::::::::..:::::::: :::::::::::::::::::::.:::::::.::: gi|739 VEVGERASWALGVCREDANRKEKGELFAGNGFWILVFLGSYYNSSERAFAPLRDPPQRVG 350 360 370 380 390 400 300 310 320 330 340 350 hh0369 IFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKGGSGDTL :::::::::::::::.:::::. ::: ::::::: :::::::::::::::: ::: ::.: gi|739 IFLDYEAGHLSFYSASDGSLLYAFPETPFSGTLRALFSPLSSSPTPMTICRLKGGPGDAL 410 420 430 440 450 460 360 hh0369 APQ ::: gi|739 APQ 360 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 08:19:37 2008 done: Tue Aug 12 08:22:07 2008 Total Scan time: 795.290 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]