hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-08220871/chunk_1/iprscan-20080812-08220871.nocrc
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Query sequence: hh03691
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00622.18.fs SPRY domain                                    100.7    2.5e-28   1
PF00622.18.ls SPRY domain                                    102.4    1.2e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00622.18.fs   1/1     231   350 ..     1   154 []   100.7  2.5e-28
PF00622.18.ls   1/1     231   350 ..     1   154 []   102.4  1.2e-27

Alignments of top-scoring domains:
PF00622.18.fs: domain 1 of 1, from 231 to 350: score 100.7, E = 2.5e-28
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                      sG+hY+EVev++++     w++G++++ v            rk +  
     hh03691   231    SGRHYWEVEVGDRTS----WALGVCRENV-----------NRKEKGE 262  

                   llGddegswgydgsggkkyhagesgepyglpfqekgdviGcflDyeagVt
                   l+  + g+w +   g + y+++e  ++  +   + ++++G+flDyeag +
     hh03691   263 LSAGN-GFWILVFLG-SYYNSSE--RALAPLRDP-PRRVGIFLDYEAG-H 306  

                   isFtkNGkyLgdsEshiyaFrnvtfdkkpggpLyPavslgsadgggeair
                   +sF+ +++      s++++F + +f+    g L+P +s  s     +  +
     hh03691   307 LSFYSATDG-----SLLFIFPEIPFS----GTLRPLFSPLS----SSPTP 343  

                   lnfgqlp<-*
                   + +++++   
     hh03691   344 MTICRPK    350  

PF00622.18.ls: domain 1 of 1, from 231 to 350: score 102.4, E = 1.2e-27
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                      sG+hY+EVev++++     w++G++++ v            rk +  
     hh03691   231    SGRHYWEVEVGDRTS----WALGVCRENV-----------NRKEKGE 262  

                   llGddegswgydgsggkkyhagesgepyglpfqekgdviGcflDyeagVt
                   l+  + g+w +   g + y+++e  ++  +   + ++++G+flDyeag +
     hh03691   263 LSAGN-GFWILVFLG-SYYNSSE--RALAPLRDP-PRRVGIFLDYEAG-H 306  

                   isFtkNGkyLgdsEshiyaFrnvtfdkkpggpLyPavslgsadgggeair
                   +sF+ +++      s++++F + +f+    g L+P +s  s     +  +
     hh03691   307 LSFYSATDG-----SLLFIFPEIPFS----GTLRPLFSPLS----SSPTP 343  

                   lnfgqlp<-*
                   + +++++   
     hh03691   344 MTICRPK    350  

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