hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-08220871/chunk_1/iprscan-20080812-08220871.nocrc
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Query sequence: hh03691
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00449                                                 104.2    1.5e-26   1
SM00589                                                 100.4    2.1e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00589    1/1     178   230 ..     1    56 []   100.4  2.1e-25
SM00449    1/1     231   350 ..     1   145 []   104.2  1.5e-26

Alignments of top-scoring domains:
SM00589: domain 1 of 1, from 178 to 230: score 100.4, E = 2.1e-25
                   *->avdvtLDPdTAhpkLlLSeDrrsVrygdtkqkGsnlpdnPeRFdsyp
                        dvtLDPdTA+p L+LSeDrrsV++gd++q    lpd+PeRFd  p
     hh03691   178    RGDVTLDPDTANPELILSEDRRSVQRGDLRQ---ALPDSPERFDPGP 221  

                   cVLGsegFs<-*
                   cVLG+e F+   
     hh03691   222 CVLGQERFT    230  

SM00449: domain 1 of 1, from 231 to 350: score 104.2, E = 1.5e-26
                   *->sGkhYfEVevdtggdkghwrvGvatksvhlypfkvrrkrkggvsllG
                      sG+hY+EVev++ ++   w +Gv++++v         +rk +++l+ 
     hh03691   231    SGRHYWEVEVGDRTS---WALGVCRENV---------NRKEKGELSA 265  

                   edkgSwgyrgdggkkyhasefgeeyglpfqepgDviGcflDleaggStis
                    + g+w +   g + y+ se  +  +++ ++ ++++G+flD+eag   +s
     hh03691   266 GN-GFWILVFLG-SYYNSSE--RALAPLRDP-PRRVGIFLDYEAG--HLS 308  

                   FykNGkyLgdshilaffdvtfsgpLyPavslgstdgGgesvrlnfGp.p<
                   Fy + +    s + +f++++fsg+L+P +s+ s    ++ ++++++ ++ 
     hh03691   309 FYSATDG---SLLFIFPEIPFSGTLRPLFSPLS----SSPTPMTICRpK  350  

                   -*
                     
     hh03691     -    -    

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