hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-09391511/chunk_1/iprscan-20080812-09391511.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: hh06429
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00685.17.ls   Sulfotransferase domain                 269.8    5.1e-78   1
PF00685.17.fs   Sulfotransferase domain                 268.0    1.7e-77   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00685.17.fs     1/1     420   683 ..     1   342 []   268.0  1.7e-77
PF00685.17.ls     1/1     420   683 ..     1   342 []   269.8  5.1e-78

Alignments of top-scoring domains:
PF00685.17.fs: domain 1 of 1, from 420 to 683: score 268.0, E = 1.7e-77
                   *->pdDvlivtyPKSGTTWlqeilslqdiFYlFePLwhvEipnrgdf.ss
                       +++li++++K+GTT+l+ +l +              +p+  ++ +s
     hh06429   420    FPKLLIIGPQKTGTTALYLFLGM--------------HPDLSSNyPS 452  

                   pekceepplfnnphnrvPfLEwymlffPetlesvppesdrlrecgllnlt
                   +e++ee+++fn  hn++++++wym ffP +++++ +              
     hh06429   453 SETFEEIQFFNG-HNYHKGIDWYMEFFPIPSNTTSD-------------- 487  

                   laleklasyfhveegverlkalpsPRlikTHLPlhlLPkslwdskcKiIY
                   +++ek+a+yf++e+ ++r++al                     +k+K+++
     hh06429   488 FYFEKSANYFDSEVAPRRAAAL--------------------LPKAKVLT 517  

                   vvRNPKDvaVSyYhfsrmakewmkwlervilpapgtpsfevl.a.n.al.
                   ++ NP D+a+S+Y+++r+++         ++ a ++++ ev++a+++a++
     hh06429   518 ILINPADRAYSWYQHQRAHD---------DPVALKYTFHEVItAgSdASs 558  

                   effelFlaGkvvyGsyfdHvkgWweaSlrkpenvLflsYEdlkkDPrgei
                    ++ l++ +++v+G+y+ H+++W++   ++  ++L l++  l+++P++++
     hh06429   559 KLRALQN-RCLVPGWYATHIERWLS--AYHANQILVLDGKLLRTEPAKVM 605  

                   kkiaeFLGkplseEeEeGrldkivkhlsFenmKgnpcvnyselpkeimdh
                     +++FLG++           ++ k l F+  Kg++c+ +          
     hh06429   606 DMVQKFLGVT--------NTIDYHKTLAFDPKKGFWCQLL---------- 637  

                   ensiEnspffRKGivgdWGRqknhftveqaekfdeiye.hN.klsekmkg
                         + ++ K++++++GR++++++ + + ++ ++y++hN +ls+++ +
     hh06429   638 ------EGGKTKCLGKSKGRKYPEMDLDSRAFLKDYYRdHNiELSKLLYK 681  

                   tg<-*
                    g   
     hh06429   682 MG    683  

PF00685.17.ls: domain 1 of 1, from 420 to 683: score 269.8, E = 5.1e-78
                   *->pdDvlivtyPKSGTTWlqeilslqdiFYlFePLwhvEipnrgdf.ss
                       +++li++++K+GTT+l+ +l +              +p+  ++ +s
     hh06429   420    FPKLLIIGPQKTGTTALYLFLGM--------------HPDLSSNyPS 452  

                   pekceepplfnnphnrvPfLEwymlffPetlesvppesdrlrecgllnlt
                   +e++ee+++fn  hn++++++wym ffP +++++ +              
     hh06429   453 SETFEEIQFFNG-HNYHKGIDWYMEFFPIPSNTTSD-------------- 487  

                   laleklasyfhveegverlkalpsPRlikTHLPlhlLPkslwdskcKiIY
                   +++ek+a+yf++e+ ++r++al                     +k+K+++
     hh06429   488 FYFEKSANYFDSEVAPRRAAAL--------------------LPKAKVLT 517  

                   vvRNPKDvaVSyYhfsrmakewmkwlervilpapgtpsfevl.a.n.al.
                   ++ NP D+a+S+Y+++r+++         ++ a ++++ ev++a+++a++
     hh06429   518 ILINPADRAYSWYQHQRAHD---------DPVALKYTFHEVItAgSdASs 558  

                   effelFlaGkvvyGsyfdHvkgWweaSlrkpenvLflsYEdlkkDPrgei
                    ++ l++ +++v+G+y+ H+++W++   ++  ++L l++  l+++P++++
     hh06429   559 KLRALQN-RCLVPGWYATHIERWLS--AYHANQILVLDGKLLRTEPAKVM 605  

                   kkiaeFLGkplseEeEeGrldkivkhlsFenmKgnpcvnyselpkeimdh
                     +++FLG++           ++ k l F+  Kg++c+ +          
     hh06429   606 DMVQKFLGVT--------NTIDYHKTLAFDPKKGFWCQLL---------- 637  

                   ensiEnspffRKGivgdWGRqknhftveqaekfdeiye.hN.klsekmkg
                         + ++ K++++++GR++++++ + + ++ ++y++hN +ls+++ +
     hh06429   638 ------EGGKTKCLGKSKGRKYPEMDLDSRAFLKDYYRdHNiELSKLLYK 681  

                   tg<-*
                    g   
     hh06429   682 MG    683  

//