# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohh06443.fasta.nr -Q hh06443.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hh06443, 310 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6840361 sequences Expectation_n fit: rho(ln(x))= 5.1201+/-0.000193; mu= 10.7943+/- 0.011 mean_var=88.6262+/-16.980, 0's: 45 Z-trim: 49 B-trim: 115 in 1/64 Lambda= 0.136236 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087796|dbj|BAD92345.1| solute carrier family ( 310) 2216 445.0 7e-123 gi|114627393|ref|XP_528524.2| PREDICTED: solute ca ( 507) 417 91.7 2.7e-16 gi|150421565|sp|Q9UGQ3.2|GTR6_HUMAN Solute carrier ( 507) 416 91.5 3.1e-16 gi|6714699|emb|CAB66155.1| sugar transporter [Homo ( 507) 416 91.5 3.1e-16 gi|109109892|ref|XP_001118379.1| PREDICTED: solute ( 480) 407 89.7 1e-15 gi|73967702|ref|XP_548395.2| PREDICTED: similar to ( 507) 311 70.8 5.1e-10 gi|119936015|gb|ABM06058.1| solute carrier family ( 507) 302 69.1 1.7e-09 gi|149039226|gb|EDL93446.1| solute carrier family ( 321) 239 56.5 6.8e-06 gi|148676405|gb|EDL08352.1| solute carrier family ( 213) 232 54.9 1.3e-05 gi|74147638|dbj|BAE38697.1| unnamed protein produc ( 497) 232 55.3 2.4e-05 gi|74211937|dbj|BAE29311.1| unnamed protein produc ( 497) 232 55.3 2.4e-05 gi|26354366|dbj|BAC40811.1| unnamed protein produc ( 497) 227 54.3 4.7e-05 gi|118099375|ref|XP_423637.2| PREDICTED: similar t ( 535) 208 50.6 0.00066 gi|118099373|ref|XP_001235256.1| PREDICTED: simila ( 159) 197 47.9 0.0013 gi|126297829|ref|XP_001365525.1| PREDICTED: simila ( 500) 188 46.6 0.0096 >>gi|62087796|dbj|BAD92345.1| solute carrier family 2 (f (310 aa) initn: 2216 init1: 2216 opt: 2216 Z-score: 2361.2 bits: 445.0 E(): 7e-123 Smith-Waterman score: 2216; 100.000% identity (100.000% similar) in 310 aa overlap (1-310:1-310) 10 20 30 40 50 60 hh0644 SPPSPWTSQAARCCSSSQVSTLQAALLPHSSAWVRAGLGVQACLGVGLCGWELQSTCLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SPPSPWTSQAARCCSSSQVSTLQAALLPHSSAWVRAGLGVQACLGVGLCGWELQSTCLPS 10 20 30 40 50 60 70 80 90 100 110 120 hh0644 IGRALAQASGPERSAGAPSGHTGCDTPRWEPNTRLETELAALLGVSSPRHELDHASIKGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IGRALAQASGPERSAGAPSGHTGCDTPRWEPNTRLETELAALLGVSSPRHELDHASIKGL 70 80 90 100 110 120 130 140 150 160 170 180 hh0644 CRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAGLESESWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAGLESESWG 130 140 150 160 170 180 190 200 210 220 230 240 hh0644 DLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLERGVSSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLERGVSSSSA 190 200 210 220 230 240 250 260 270 280 290 300 hh0644 ETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACWPAGSPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACWPAGSPPS 250 260 270 280 290 300 310 hh0644 SSPSPSCQWW :::::::::: gi|620 SSPSPSCQWW 310 >>gi|114627393|ref|XP_528524.2| PREDICTED: solute carrie (507 aa) initn: 441 init1: 417 opt: 417 Z-score: 447.6 bits: 91.7 E(): 2.7e-16 Smith-Waterman score: 417; 94.118% identity (95.588% similar) in 68 aa overlap (144-211:345-412) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .::::::::::::::::::::::::::::: gi|114 AAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAG 320 330 340 350 360 370 180 190 200 210 220 230 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLER :::::::::::::::::::::::::::::::::: : gi|114 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAMGWGPITWLLMSEVLPLRARGVAS 380 390 400 410 420 430 240 250 260 270 280 290 hh0644 GVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACW gi|114 GLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQI 440 450 460 470 480 490 >>gi|150421565|sp|Q9UGQ3.2|GTR6_HUMAN Solute carrier fam (507 aa) initn: 440 init1: 416 opt: 416 Z-score: 446.5 bits: 91.5 E(): 3.1e-16 Smith-Waterman score: 416; 94.118% identity (95.588% similar) in 68 aa overlap (144-211:345-412) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .::::::::::::::::::::::::::::: gi|150 AAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAG 320 330 340 350 360 370 180 190 200 210 220 230 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLER :::::::::::::::::::::::::::::::::: : gi|150 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAVGWGPITWLLMSEVLPLRARGVAS 380 390 400 410 420 430 240 250 260 270 280 290 hh0644 GVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACW gi|150 GLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQI 440 450 460 470 480 490 >>gi|6714699|emb|CAB66155.1| sugar transporter [Homo sap (507 aa) initn: 440 init1: 416 opt: 416 Z-score: 446.5 bits: 91.5 E(): 3.1e-16 Smith-Waterman score: 416; 94.118% identity (95.588% similar) in 68 aa overlap (144-211:345-412) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .::::::::::::::::::::::::::::: gi|671 AAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAG 320 330 340 350 360 370 180 190 200 210 220 230 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLER :::::::::::::::::::::::::::::::::: : gi|671 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGYAVGWGPITWLLMSEVLPLRARGVAS 380 390 400 410 420 430 240 250 260 270 280 290 hh0644 GVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACW gi|671 GLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQI 440 450 460 470 480 490 >>gi|109109892|ref|XP_001118379.1| PREDICTED: solute car (480 aa) initn: 428 init1: 404 opt: 407 Z-score: 437.3 bits: 89.7 E(): 1e-15 Smith-Waterman score: 420; 55.147% identity (72.794% similar) in 136 aa overlap (144-268:345-479) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .::::::::::::::::::::::::::::: gi|109 AAIVGAVRLLSVLIAALTMDLAGRKVLLFVSAAIMFAANLTLGLYIHFGPRPLSPNSTAG 320 330 340 350 360 370 180 190 200 210 220 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVL----------GV-K :::::::.:::::::::::::::::::::.:::: : . .: :: . gi|109 LESESWGNLAQPLAAPAGYLTLVPLLATMFFIMGYAMGWGPITWLLMSEVLPLRARGVAS 380 390 400 410 420 430 230 240 250 260 270 280 hh0644 GWVMCLGWLERGVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCV : . .:: : ..: ...:..: .:.:. .... . :. gi|109 GLCVLASWLTAFVLTKSF-LPVVVSAQPRAPRPSLTDQDPSQCQGLC 440 450 460 470 480 290 300 310 hh0644 PVAWPQGSACWPAGSPPSSSPSPSCQWW >>gi|73967702|ref|XP_548395.2| PREDICTED: similar to Sol (507 aa) initn: 311 init1: 311 opt: 311 Z-score: 335.0 bits: 70.8 E(): 5.1e-10 Smith-Waterman score: 311; 69.118% identity (83.824% similar) in 68 aa overlap (144-211:345-412) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .:.::::::::.:::.::::.::.:::: : gi|739 AAIVGAVRLFSVLIAALTMDLAGRKVLLFVSATIMFAANLTVGLYVHFGPKPLTPNSTMG 320 330 340 350 360 370 180 190 200 210 220 230 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLER ::: : ::::.:..:::::::.:::::: : : gi|739 LESIPLGGTEQPLATPSSYLTLVPLVATMLFITGYAMGWGPITWLLMSEILPLQARGVAS 380 390 400 410 420 430 240 250 260 270 280 290 hh0644 GVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACW gi|739 GLCVLVSWLTAFALTKSFLLVVNAFGLHVPFFFFAAICLASLVFTGCCVPETKGRSLEQI 440 450 460 470 480 490 >>gi|119936015|gb|ABM06058.1| solute carrier family 2 (f (507 aa) initn: 302 init1: 302 opt: 302 Z-score: 325.5 bits: 69.1 E(): 1.7e-09 Smith-Waterman score: 302; 64.865% identity (79.730% similar) in 74 aa overlap (138-211:339-412) 110 120 130 140 150 160 hh0644 PRHELDHASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLS .: . .:: :::::::::::.::::. :. gi|119 LPPKVDAAIVGAVRLLSVLIAALTMDLAGRKALLFVSAAGMFAANLTLGLYVHFGPKSLA 310 320 330 340 350 360 170 180 190 200 210 220 hh0644 PNSTAGLESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMC :::. :: :. . ::::::..:::::::::::::::: : gi|119 PNSSMGLGREALAGTEQPLAAPTSYLTLVPLLATMLFIMGYAVGWGPITWLLMSEILPLR 370 380 390 400 410 420 230 240 250 260 270 280 hh0644 LGWLERGVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWP gi|119 ARGVASGLCVLVSWLTAFALTKSFLLVTNAFGLQAPFFFFAAVCLVNLAFTGCCVPETKG 430 440 450 460 470 480 >>gi|149039226|gb|EDL93446.1| solute carrier family 2 (f (321 aa) initn: 267 init1: 128 opt: 239 Z-score: 261.0 bits: 56.5 E(): 6.8e-06 Smith-Waterman score: 239; 60.294% identity (76.471% similar) in 68 aa overlap (144-211:161-226) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .:.:::.::::::::... :: :.:::: gi|149 AAIVGAVRLLSVLIAAVTMDLAGRKVLLYVSASIMFVANLTLGLYVQLVPRTLTPNST-- 140 150 160 170 180 180 190 200 210 220 230 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLER .: . : :: :: .::::.::::::::::: : gi|149 VEIVTLGGTEQPPAAAFNYLTLIPLLATMLFIMGYAMGWGPITWLLMSEVLPLRARGVAS 190 200 210 220 230 240 240 250 260 270 280 290 hh0644 GVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACW gi|149 GLCVLVSWLTAFVLTKYFLLAVNAFGLQVPFFFFSAICLLSLLFTGCCVPETRGRSLEQI 250 260 270 280 290 300 >>gi|148676405|gb|EDL08352.1| solute carrier family 2 (f (213 aa) initn: 264 init1: 150 opt: 232 Z-score: 255.8 bits: 54.9 E(): 1.3e-05 Smith-Waterman score: 232; 60.294% identity (75.000% similar) in 68 aa overlap (144-211:59-118) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .:..:::::::::::..: ::::.:::: gi|148 AAIVGAVRLLSVLIAAVTMDLAGRKVLLYVSASVMFAANLTLGLYVQFVPRPLTPNST-- 30 40 50 60 70 80 180 190 200 210 220 230 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLER .: . :: : .::::.::::::::::: : gi|148 VEIVTLGDTA------FNYLTLIPLLATMLFIMGYAMGWGPITWLLMSEVLPLRARGVAS 90 100 110 120 130 140 240 250 260 270 280 290 hh0644 GVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACW gi|148 GLCVLVSWLTAFVLTNYFLLAVNAFGLQVPFFFFSAICLLSLLFTGCCVPETRGRSLEQI 150 160 170 180 190 200 >>gi|74147638|dbj|BAE38697.1| unnamed protein product [M (497 aa) initn: 264 init1: 150 opt: 232 Z-score: 251.2 bits: 55.3 E(): 2.4e-05 Smith-Waterman score: 232; 60.294% identity (75.000% similar) in 68 aa overlap (144-211:343-402) 120 130 140 150 160 170 hh0644 HASIKGLCRRSSERNSWLRGSWPHEATCLSTAAIMFAANLTLGLYIHFGPRPLSPNSTAG .:..:::::::::::..: ::::.:::: gi|741 AAIVGAVRLLSVLIAAVTMDLAGRKVLLYVSASVMFAANLTLGLYVQFVPRPLTPNST-- 320 330 340 350 360 370 180 190 200 210 220 230 hh0644 LESESWGDLAQPLAAPAGYLTLVPLLATMLFIMGRCGGGSEGQAVLGVKGWVMCLGWLER .: . :: : .::::.::::::::::: : gi|741 VEIVTLGDTA------FNYLTLIPLLATMLFIMGYAMGWGPITWLLMSEVLPLRARGVAS 380 390 400 410 420 240 250 260 270 280 290 hh0644 GVSSSSAETDTAASSHPTGPEPASSSEQATPWAGVPSPGCSCLRSCPCVPVAWPQGSACW gi|741 GLCVLVSWLTAFVLTNYFLLAVNAFGLQVPFFFFSAICLLSLLFTGCCVPETRGRSLEQI 430 440 450 460 470 480 310 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 09:42:49 2008 done: Tue Aug 12 09:45:25 2008 Total Scan time: 744.260 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]