hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-10263472/chunk_1/iprscan-20080812-10263472.nocrc
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Query sequence: hh09010
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                 368.3   4.9e-106   8

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/8     105   144 ..     1    46 []    55.1    9e-12
SM00320    2/8     147   186 ..     1    46 []    53.9  2.1e-11
SM00320    3/8     190   234 ..     1    46 []    35.3  8.4e-06
SM00320    4/8     237   275 ..     1    46 []    49.2  5.5e-10
SM00320    5/8     278   359 ..     1    46 []    26.4   0.0039
SM00320    6/8     363   402 ..     1    46 []    47.0  2.4e-09
SM00320    7/8     405   444 ..     1    46 []    53.4  2.9e-11
SM00320    8/8     447   486 ..     1    46 []    48.0  1.3e-09

Alignments of top-scoring domains:
SM00320: domain 1 of 8, from 105 to 144: score 55.1, E = 9e-12
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       ++++++l+gH+   +V svafsp+g      ++lasgs+D t+r+W
     hh09010   105    VtRCTSSLEGHSE--AVISVAFSPTG------KYLASGSgDTTVRFW 143  

                   d<-*
                   d   
     hh09010   144 D    144  

SM00320: domain 2 of 8, from 147 to 186: score 53.9, E = 2.1e-11
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t ++ +t+kgH++  +V+s+++spdg      + lasg+++g+i lW
     hh09010   147    TeTPHFTCKGHRH--WVLSISWSPDG------KKLASGCkNGQILLW 185  

                   d<-*
                   d   
     hh09010   186 D    186  

SM00320: domain 3 of 8, from 190 to 234: score 35.3, E = 8.4e-06
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +++ rtl gH++  ++t++++ p + + +  +++as+s+Dg++r+W
     hh09010   190    GkQVGRTLAGHSK--WITGLSWEPLHAN-PECRYVASSSkDGSVRIW 233  

                   d<-*
                   d   
     hh09010   234 D    234  

SM00320: domain 4 of 8, from 237 to 275: score 49.2, E = 5.5e-10
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +++ r+l+gHt+  +Vt++++  dg       ll+s+s+D+ti++W
     hh09010   237    AgRCERILTGHTQ--SVTCLRWGGDG-------LLYSASqDRTIKVW 274  

                   d<-*
                       
     hh09010   275 R    275  

SM00320: domain 5 of 8, from 278 to 359: score 26.4, E = 0.0039
                   *->t.kllrtlkgHtgespVtsvafspdggss..................
                      ++ l+rtl+gH +  +V+++a s d   +++  ++ + + ++++ ++
     hh09010   278    DgVLCRTLQGHGH--WVNTMALSTDYALRtgafepaeasvnpqdlqg 322  

                   ..................dspnllasgs.DgtirlWd<-*
                     ++ +++  ++ +  ++ +p++l+sgs+D t+ lW+   
     hh09010   323 flqelkeralsrynlvrgQGPERLVSGSdDFTLFLWS    359  

SM00320: domain 6 of 8, from 363 to 402: score 47.0, E = 2.4e-09
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++k+l  ++gH++   ++ v fspd+      +++as+s D++i+lW
     hh09010   363    DkKPLTRMTGHQA--LINQVLFSPDS------RIVASASfDKSIKLW 401  

                   d<-*
                   d   
     hh09010   402 D    402  

SM00320: domain 7 of 8, from 405 to 444: score 53.4, E = 2.9e-11
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t+k l++l+gH +  +V+ +a+s d+      +ll+sgs+D+t+++W
     hh09010   405    TgKYLASLRGHVA--AVYQIAWSADS------RLLVSGSsDSTLKVW 443  

                   d<-*
                   d   
     hh09010   444 D    444  

SM00320: domain 8 of 8, from 447 to 486: score 48.0, E = 1.3e-09
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +kl + l+gH +  +V++v++spdg      +++asg++D+++r+W
     hh09010   447    AqKLAMDLPGHAD--EVYAVDWSPDG------QRVASGGkDKCLRIW 485  

                   d<-*
                       
     hh09010   486 R    486  

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