# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohh10138.fasta.nr -Q hh10138.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hh10138, 223 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6840425 sequences Expectation_n fit: rho(ln(x))= 4.6593+/-0.000187; mu= 11.7449+/- 0.010 mean_var=75.5741+/-14.481, 0's: 33 Z-trim: 39 B-trim: 0 in 0/67 Lambda= 0.147533 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087804|dbj|BAD92349.1| solute carrier family ( 223) 1659 361.7 4.5e-98 gi|18027378|gb|AAL55771.1|AF289587_1 unknown [Homo ( 248) 324 77.6 1.7e-12 gi|55665088|emb|CAH72916.1| solute carrier family ( 256) 324 77.6 1.7e-12 gi|55665095|emb|CAH72923.1| solute carrier family ( 265) 324 77.6 1.8e-12 gi|55665093|emb|CAH72921.1| solute carrier family ( 267) 324 77.6 1.8e-12 gi|55665094|emb|CAH72922.1| solute carrier family ( 276) 324 77.6 1.8e-12 gi|119608069|gb|EAW87663.1| solute carrier family ( 314) 324 77.7 2e-12 gi|55665089|emb|CAH72917.1| solute carrier family ( 411) 324 77.8 2.4e-12 gi|7018306|emb|CAB75702.1| glucose transporter [Ho ( 477) 324 77.9 2.6e-12 gi|7688146|emb|CAB89809.1| glucose transporter 8 [ ( 477) 324 77.9 2.6e-12 gi|145559479|sp|Q9NY64|GTR8_HUMAN Solute carrier f ( 477) 324 77.9 2.6e-12 gi|114626757|ref|XP_001148477.1| PREDICTED: solute ( 408) 323 77.6 2.7e-12 gi|114626755|ref|XP_001148685.1| PREDICTED: solute ( 477) 323 77.7 3e-12 gi|109112172|ref|XP_001096192.1| PREDICTED: simila ( 477) 315 76.0 9.9e-12 gi|20271042|gb|AAM18513.1| glucose transporter 8 [ ( 246) 296 71.6 1e-10 gi|14582716|gb|AAK69606.1|AF321324_1 glucose trans ( 334) 295 71.5 1.5e-10 gi|77416866|sp|P58354|GTR8_BOVIN Solute carrier fa ( 478) 295 71.7 1.9e-10 gi|194033606|ref|XP_001926135.1| PREDICTED: solute ( 478) 294 71.5 2.2e-10 gi|194225845|ref|XP_001500265.2| PREDICTED: simila ( 487) 287 70.0 6.2e-10 gi|61676486|gb|AAX51786.1| intestinal GLUT8 transp ( 291) 279 68.1 1.4e-09 gi|73968015|ref|XP_862887.1| PREDICTED: similar to ( 409) 279 68.2 1.8e-09 gi|73968013|ref|XP_537837.2| PREDICTED: similar to ( 478) 279 68.3 2e-09 gi|18256141|gb|AAH21758.1| Slc2a8 protein [Mus mus ( 266) 274 67.0 2.8e-09 gi|148676644|gb|EDL08591.1| solute carrier family ( 283) 274 67.0 2.9e-09 gi|61676488|gb|AAX51787.1| intestinal GLUT8 transp ( 329) 274 67.1 3.2e-09 gi|7688220|emb|CAB89815.1| glucose transporter 8 [ ( 477) 274 67.2 4.2e-09 gi|17366884|sp|Q9JIF3|GTR8_MOUSE Solute carrier fa ( 477) 274 67.2 4.2e-09 gi|7018607|emb|CAB75719.1| glucose transporter [Mu ( 477) 274 67.2 4.2e-09 gi|149038977|gb|EDL93197.1| solute carrier family ( 284) 262 64.4 1.7e-08 gi|17365989|sp|Q9JJZ1|GTR8_RAT Solute carrier fami ( 478) 262 64.7 2.5e-08 gi|149038976|gb|EDL93196.1| solute carrier family ( 478) 262 64.7 2.5e-08 gi|7592744|dbj|BAA94383.1| glucose transporter 8 [ ( 479) 262 64.7 2.5e-08 gi|149637139|ref|XP_001507961.1| PREDICTED: simila ( 448) 244 60.8 3.4e-07 gi|126294306|ref|XP_001373029.1| PREDICTED: simila ( 485) 240 60.0 6.4e-07 gi|29436434|gb|AAH49409.1| Solute carrier family 2 ( 498) 238 59.6 8.7e-07 gi|47227668|emb|CAG09665.1| unnamed protein produc ( 446) 232 58.3 2e-06 gi|23821304|dbj|BAC20934.1| glucose transporter ty ( 482) 185 48.3 0.0021 >>gi|62087804|dbj|BAD92349.1| solute carrier family 2, ( (223 aa) initn: 1659 init1: 1659 opt: 1659 Z-score: 1915.9 bits: 361.7 E(): 4.5e-98 Smith-Waterman score: 1659; 100.000% identity (100.000% similar) in 223 aa overlap (1-223:1-223) 10 20 30 40 50 60 hh1013 GHRGCWDEEPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GHRGCWDEEPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYK 10 20 30 40 50 60 70 80 90 100 110 120 hh1013 PFIIGVSLMAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PFIIGVSLMAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQP 70 80 90 100 110 120 130 140 150 160 170 180 hh1013 SSTGLEREGPSSQLAHLTCLGSVSPRTAAWPRSSWVSSRCCSQLWRLSSWTEQGGGCSWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SSTGLEREGPSSQLAHLTCLGSVSPRTAAWPRSSWVSSRCCSQLWRLSSWTEQGGGCSWS 130 140 150 160 170 180 190 200 210 220 hh1013 CQVRVHPCAASPPWGGGPSPGPPHCRRRTGSICDDKHHGLMRP ::::::::::::::::::::::::::::::::::::::::::: gi|620 CQVRVHPCAASPPWGGGPSPGPPHCRRRTGSICDDKHHGLMRP 190 200 210 220 >>gi|18027378|gb|AAL55771.1|AF289587_1 unknown [Homo sap (248 aa) initn: 344 init1: 322 opt: 324 Z-score: 379.6 bits: 77.6 E(): 1.7e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:71-126) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|180 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 50 60 70 80 90 100 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|180 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 110 120 130 140 150 160 >>gi|55665088|emb|CAH72916.1| solute carrier family 2, ( (256 aa) initn: 322 init1: 322 opt: 324 Z-score: 379.5 bits: 77.6 E(): 1.7e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:165-220) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|556 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 140 150 160 170 180 190 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|556 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 200 210 220 230 240 250 >>gi|55665095|emb|CAH72923.1| solute carrier family 2, ( (265 aa) initn: 322 init1: 322 opt: 324 Z-score: 379.3 bits: 77.6 E(): 1.8e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:71-126) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|556 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 50 60 70 80 90 100 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|556 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 110 120 130 140 150 160 >>gi|55665093|emb|CAH72921.1| solute carrier family 2, ( (267 aa) initn: 322 init1: 322 opt: 324 Z-score: 379.2 bits: 77.6 E(): 1.8e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:99-154) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|556 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 70 80 90 100 110 120 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|556 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 130 140 150 160 170 180 >>gi|55665094|emb|CAH72922.1| solute carrier family 2, ( (276 aa) initn: 322 init1: 322 opt: 324 Z-score: 379.1 bits: 77.6 E(): 1.8e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:73-128) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|556 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 50 60 70 80 90 100 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|556 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 110 120 130 140 150 160 >>gi|119608069|gb|EAW87663.1| solute carrier family 2, ( (314 aa) initn: 322 init1: 322 opt: 324 Z-score: 378.4 bits: 77.7 E(): 2e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:71-126) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|119 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 50 60 70 80 90 100 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|119 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 110 120 130 140 150 160 >>gi|55665089|emb|CAH72917.1| solute carrier family 2, ( (411 aa) initn: 344 init1: 322 opt: 324 Z-score: 376.9 bits: 77.8 E(): 2.4e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:234-289) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|556 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 210 220 230 240 250 260 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|556 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 270 280 290 300 310 320 >>gi|7018306|emb|CAB75702.1| glucose transporter [Homo s (477 aa) initn: 322 init1: 322 opt: 324 Z-score: 376.1 bits: 77.9 E(): 2.6e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:234-289) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|701 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 210 220 230 240 250 260 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|701 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 270 280 290 300 310 320 >>gi|7688146|emb|CAB89809.1| glucose transporter 8 [Homo (477 aa) initn: 322 init1: 322 opt: 324 Z-score: 376.1 bits: 77.9 E(): 2.6e-12 Smith-Waterman score: 324; 91.071% identity (92.857% similar) in 56 aa overlap (39-94:234-289) 10 20 30 40 50 60 hh1013 EPRRGSQRSPSLRTVDPQRGAACGRGERNPDGQYPSEQSFHLALLRQPGIYKPFIIGVSL : .:::::::::::::::::::::::: gi|768 ETPRFLLTQHRRQEAMAALRFLWGSEQGWEDPPIGAEQSFHLALLRQPGIYKPFIIGVSL 210 220 230 240 250 260 70 80 90 100 110 120 hh1013 MAFQQLSGVNAVMFYAETIFEEAKFKVKGPCLACLVQPPHRWSFLPKPRAQPSSTGLERE :::::::::::::::::::::::::: gi|768 MAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLV 270 280 290 300 310 320 223 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 10:36:35 2008 done: Tue Aug 12 10:39:21 2008 Total Scan time: 657.650 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]