hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-10392248/chunk_1/iprscan-20080812-10392248.nocrc
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Query sequence: hh10138
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00083.14.fs Sugar (and other) transporter                   28.9    4.2e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00083.14.fs   1/1      52    91 ..   263   305 ..    28.9  4.2e-08

Alignments of top-scoring domains:
PF00083.14.fs: domain 1 of 1, from 52 to 91: score 28.9, E = 4.2e-08
                   *->lfsrktrpkyrqrllmgvmlqifQQltGiNaifYYsptifesl<-*
                      l+++++   + +++++gv l++fQQl+G Na+++Y+ tife +   
     hh10138    52    LLRQPG---IYKPFIIGVSLMAFQQLSGVNAVMFYAETIFEEA    91   

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