hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-12031453/chunk_1/iprscan-20080812-12031453.nocrc
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Query sequence: hh13530
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
TIGR00125    cyt_tran_rel: cytidyltransferase-related    71.4    9.4e-19   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
TIGR00125      1/1      72   139 ..     1    63 []    71.4  9.4e-19

Alignments of top-scoring domains:
TIGR00125: domain 1 of 1, from 72 to 139: score 71.4, E = 9.4e-19
                   *->ivifgGtfdplHlGHldllerakelgd...livgvgsdefvnplk..
                      +v+++G fd++H GH + l +ak l++++ l+vgv+sd++++++k+ 
     hh13530    72    RVYADGIFDLFHSGHARALMQAKTLFPnsyLLVGVCSDDLTHKFKgf 118  

                   pvfsleerlellkalkyvdev<-*
                    v+++ er+e l++++yvdev   
     hh13530   119 TVMNEAERYEALRHCRYVDEV    139  

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