# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohh13729.fasta.nr -Q hh13729.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hh13729, 781 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6808964 sequences Expectation_n fit: rho(ln(x))= 5.1704+/-0.000191; mu= 13.5535+/- 0.011 mean_var=90.7873+/-17.632, 0's: 35 Z-trim: 208 B-trim: 0 in 0/65 Lambda= 0.134605 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087816|dbj|BAD92355.1| BDNF/NT-3 growth facto ( 781) 5367 1053.0 0 gi|2497560|sp|Q16620|NTRK2_HUMAN BDNF/NT-3 growth ( 822) 4834 949.5 0 gi|109111970|ref|XP_001107014.1| PREDICTED: neurot ( 838) 4834 949.5 0 gi|109111968|ref|XP_001107330.1| PREDICTED: neurot ( 822) 4827 948.1 0 gi|149755253|ref|XP_001496485.1| PREDICTED: neurot ( 822) 4715 926.4 0 gi|136237|sp|P15209|NTRK2_MOUSE BDNF/NT-3 growth f ( 821) 4553 894.9 0 gi|2497561|sp|Q63604|NTRK2_RAT BDNF/NT-3 growth fa ( 821) 4533 891.0 0 gi|3024774|sp|Q91987|NTRK2_CHICK BDNF/NT-3 growth ( 818) 3629 715.5 1.8e-203 gi|18369865|gb|AAL67966.1|AF410900_1 neurotrophin ( 537) 3621 713.7 4e-203 gi|119583097|gb|EAW62693.1| neurotrophic tyrosine ( 532) 3620 713.5 4.5e-203 gi|109111974|ref|XP_001107199.1| PREDICTED: neurot ( 537) 3614 712.4 1e-202 gi|73946423|ref|XP_541264.2| PREDICTED: similar to ( 537) 3554 700.7 3.3e-199 gi|115312895|gb|AAI23937.1| Neurotrophic tyrosine ( 821) 3239 639.7 1.1e-180 gi|4096764|gb|AAD00001.1| neurotrophin receptor B ( 821) 3220 636.1 1.5e-179 gi|114625322|ref|XP_001135245.1| PREDICTED: neurot ( 489) 3210 633.9 4e-179 gi|21886728|gb|AAM77876.1|AF508964_1 protein tyros ( 477) 3209 633.7 4.5e-179 gi|18369867|gb|AAL67967.1|AF410901_1 neurotrophin ( 553) 3204 632.8 9.7e-179 gi|109111980|ref|XP_001106952.1| PREDICTED: neurot ( 489) 3203 632.5 1e-178 gi|109111976|ref|XP_001107459.1| PREDICTED: neurot ( 477) 3202 632.3 1.1e-178 gi|18369863|gb|AAL67965.1|AF410899_1 neurotrophin ( 838) 3204 633.0 1.3e-178 gi|109111972|ref|XP_001107145.1| PREDICTED: neurot ( 553) 3197 631.4 2.5e-178 gi|109111966|ref|XP_001107264.1| PREDICTED: neurot ( 838) 3197 631.6 3.3e-178 gi|73946421|ref|XP_856337.1| PREDICTED: similar to ( 477) 3142 620.7 3.7e-175 gi|73946429|ref|XP_848589.1| PREDICTED: similar to ( 838) 3137 619.9 1.1e-174 gi|73946425|ref|XP_856422.1| PREDICTED: similar to ( 859) 3137 620.0 1.1e-174 gi|73946427|ref|XP_856462.1| PREDICTED: similar to ( 897) 3137 620.0 1.1e-174 gi|149755251|ref|XP_001496508.1| PREDICTED: neurot ( 838) 3085 609.9 1.2e-171 gi|111305007|gb|AAI20086.1| Neurotrophic tyrosine ( 476) 3003 593.7 4.9e-167 gi|50660338|gb|AAT80893.1| tyrosine kinase recepto ( 669) 2936 580.8 5.1e-163 gi|202159|gb|AAA40482.1| tyrosine protein kinase B ( 476) 2928 579.1 1.2e-162 gi|207478|gb|AAA42281.1| neural receptor protein-t ( 474) 2908 575.2 1.7e-161 gi|207476|gb|AAA42280.1| neural receptor protein-t ( 476) 2908 575.2 1.8e-161 gi|194376848|dbj|BAG57570.1| unnamed protein produ ( 321) 2111 420.3 5.2e-115 gi|472936|emb|CAA54469.1| tyrosine kinase receptor ( 520) 2018 402.4 2e-109 gi|109111978|ref|XP_001107390.1| PREDICTED: neurot ( 464) 1945 388.2 3.4e-105 gi|148709324|gb|EDL41270.1| mCG121005, isoform CRA ( 388) 1923 383.9 5.8e-104 gi|148709325|gb|EDL41271.1| mCG121005, isoform CRA ( 325) 1856 370.8 4.2e-100 gi|4096766|gb|AAD00002.1| neurotrophin receptor B ( 811) 1764 353.3 1.9e-94 gi|4096768|gb|AAD09444.1| neurotrophin receptor B ( 486) 1712 343.0 1.5e-91 gi|56270029|gb|AAH87462.1| Ntrk2 protein [Xenopus ( 473) 1657 332.3 2.4e-88 gi|27924170|gb|AAH44959.1| Trkb-B-prov protein [Xe ( 476) 1652 331.3 4.6e-88 gi|189519504|ref|XP_001919963.1| PREDICTED: si:ch2 ( 813) 1518 305.5 4.6e-80 gi|169154377|emb|CAM56611.2| neurotrophic tyrosine ( 853) 1518 305.6 4.8e-80 gi|712821|gb|AAB31699.1| tyrosine kinase C recepto ( 852) 1456 293.5 2e-76 gi|81893053|sp|Q6VNS1|NTRK3_MOUSE NT-3 growth fact ( 825) 1452 292.7 3.4e-76 gi|393340|gb|AAB26724.1| receptor tyrosine kinase, ( 850) 1451 292.5 3.9e-76 gi|464932|sp|Q03351|NTRK3_RAT NT-3 growth factor r ( 864) 1451 292.6 4e-76 gi|310239|gb|AAA42283.1| tyrosine protein kinase [ ( 839) 1450 292.3 4.4e-76 gi|109082272|ref|XP_001087967.1| PREDICTED: neurot ( 817) 1448 291.9 5.7e-76 gi|47226384|emb|CAG08400.1| unnamed protein produc ( 699) 1447 291.7 5.9e-76 >>gi|62087816|dbj|BAD92355.1| BDNF/NT-3 growth factors r (781 aa) initn: 5367 init1: 5367 opt: 5367 Z-score: 5632.4 bits: 1053.0 E(): 0 Smith-Waterman score: 5367; 100.000% identity (100.000% similar) in 781 aa overlap (1-781:1-781) 10 20 30 40 50 60 hh1372 AGLGTPATSTEELREPQAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AGLGTPATSTEELREPQAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMAR 10 20 30 40 50 60 70 80 90 100 110 120 hh1372 LWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIA 70 80 90 100 110 120 130 140 150 160 170 180 hh1372 NQKRLEIINEDDVEAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NQKRLEIINEDDVEAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKH 130 140 150 160 170 180 190 200 210 220 230 240 hh1372 FRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNC 190 200 210 220 230 240 250 260 270 280 290 300 hh1372 GLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITN 250 260 270 280 290 300 310 320 330 340 350 360 hh1372 ISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPA 310 320 330 340 350 360 370 380 390 400 410 420 hh1372 LQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 370 380 390 400 410 420 430 440 450 460 470 480 hh1372 SAHFMGWPGIDDGANPNYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SAHFMGWPGIDDGANPNYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVY 430 440 450 460 470 480 490 500 510 520 530 540 hh1372 AVVVIASVVGFCLLVMLFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AVVVIASVVGFCLLVMLFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSS 490 500 510 520 530 540 550 560 570 580 590 600 hh1372 EGGPDAVIIGMTKIPVIENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EGGPDAVIIGMTKIPVIENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFL 550 560 570 580 590 600 610 620 630 640 650 660 hh1372 AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 610 620 630 640 650 660 670 680 690 700 710 720 hh1372 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVH 670 680 690 700 710 720 730 740 750 760 770 780 hh1372 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRL 730 740 750 760 770 780 hh1372 S : gi|620 S >>gi|2497560|sp|Q16620|NTRK2_HUMAN BDNF/NT-3 growth fact (822 aa) initn: 4834 init1: 4834 opt: 4834 Z-score: 5072.7 bits: 949.5 E(): 0 Smith-Waterman score: 4834; 100.000% identity (100.000% similar) in 709 aa overlap (47-755:1-709) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :::::::::::::::::::::::::::::: gi|249 MSSWIRWHGPAMARLWGFCWLVVGFWRAAF 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 450 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 460 470 480 490 500 510 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA 520 530 540 550 560 570 620 630 640 650 660 670 hh1372 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 580 590 600 610 620 630 680 690 700 710 720 730 hh1372 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 640 650 660 670 680 690 740 750 760 770 780 hh1372 KIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRLS ::::::::::::::::::: gi|249 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 700 710 720 730 740 750 >>gi|109111970|ref|XP_001107014.1| PREDICTED: neurotroph (838 aa) initn: 4888 init1: 4834 opt: 4834 Z-score: 5072.6 bits: 949.5 E(): 0 Smith-Waterman score: 4834; 99.719% identity (100.000% similar) in 711 aa overlap (47-757:1-711) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :::::::::::::::::::::::::::::. gi|109 MSSWIRWHGPAMARLWGFCWLVVGFWRAAL 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 450 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 460 470 480 490 500 510 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA 520 530 540 550 560 570 620 630 640 650 660 670 hh1372 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 580 590 600 610 620 630 680 690 700 710 720 730 hh1372 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 640 650 660 670 680 690 740 750 760 770 780 hh1372 KIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRLS :::::::::::::::::::.: gi|109 KIGDFGMSRDVYSTDYYRVTSPSGLEVCIWCELTVGGHTMLPIRWMPPESIMYRKFTTES 700 710 720 730 740 750 >>gi|109111968|ref|XP_001107330.1| PREDICTED: neurotroph (822 aa) initn: 4827 init1: 4827 opt: 4827 Z-score: 5065.3 bits: 948.1 E(): 0 Smith-Waterman score: 4827; 99.859% identity (100.000% similar) in 709 aa overlap (47-755:1-709) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :::::::::::::::::::::::::::::. gi|109 MSSWIRWHGPAMARLWGFCWLVVGFWRAAL 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 450 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 460 470 480 490 500 510 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA 520 530 540 550 560 570 620 630 640 650 660 670 hh1372 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 580 590 600 610 620 630 680 690 700 710 720 730 hh1372 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 640 650 660 670 680 690 740 750 760 770 780 hh1372 KIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRLS ::::::::::::::::::: gi|109 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 700 710 720 730 740 750 >>gi|149755253|ref|XP_001496485.1| PREDICTED: neurotroph (822 aa) initn: 4715 init1: 4715 opt: 4715 Z-score: 4947.8 bits: 926.4 E(): 0 Smith-Waterman score: 4715; 96.897% identity (99.295% similar) in 709 aa overlap (47-755:1-709) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :::: :::::: ::::::::::.::::.:. gi|149 MSSWTRWHGPATARLWGFCWLVMGFWRSAL 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY ::::::::::::::::::::::.:::::: ::.: ::::::.:::::::::::::::::: gi|149 ACPTSCKCSASRIWCSDPSPGIMAFPRLEANSADLENITEIYIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::.::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|149 VGLKNLTIVDSGLKFVAHKAFLKNTNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE ::::::::::::::.::::.:::::::::::::::::::::::::::::::::::::::: gi|149 TCSCDIMWIKTLQETKSSPETQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|149 GKSVTLSCSVAGDPVPNLYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP ::::::::::::::::::::::::::::: :.:::::::::::::::::::::::::.:: gi|149 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYKLVAKNEYGKDEKQISAHFMGWPGIDDGTNP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::::::::::::::::::::::::.::::::.:.::::::::::::::::::::::::: gi|149 NYPDVIYEDYGTAANDIGDTTNRSNNIPSTDVADNTGREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 450 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 460 470 480 490 500 510 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA 520 530 540 550 560 570 620 630 640 650 660 670 hh1372 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 580 590 600 610 620 630 680 690 700 710 720 730 hh1372 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 640 650 660 670 680 690 740 750 760 770 780 hh1372 KIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRLS ::::::::::::::::::: gi|149 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 700 710 720 730 740 750 >>gi|136237|sp|P15209|NTRK2_MOUSE BDNF/NT-3 growth facto (821 aa) initn: 2610 init1: 2584 opt: 4553 Z-score: 4777.8 bits: 894.9 E(): 0 Smith-Waterman score: 4553; 93.230% identity (98.872% similar) in 709 aa overlap (47-755:1-708) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :: :..:::::::::::.: ::.:::::.. gi|136 MSPWLKWHGPAMARLWGLCLLVLGFWRASL 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY :::::::::..::::..::::::::::::::::::::::::.:::::::::::::::::: gi|136 ACPTSCKCSSARIWCTEPSPGIVAFPRLEPNSVDPENITEILIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::::::::::::::::.:::::::::.::::::::::::::.::::::::.:::.:::: gi|136 VGLRNLTIVDSGLKFVAYKAFLKNSNLRHINFTRNKLTSLSRRHFRHLDLSDLILTGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE ::::::::.:::::.::::::::::::::::::.::::::::::::::: :::::::::: gi|136 TCSCDIMWLKTLQETKSSPDTQDLYCLNESSKNMPLANLQIPNCGLPSARLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::.::::::.:::.:..:::::::::::::::::::::::::::::::::::::::::: gi|136 GKSVTLSCSVGGDPLPTLYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|136 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVRGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::::::::::::::::::::::::::::.:::::::::.:::::::: ::.: .:: gi|136 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLMAKNEYGKDERQISAHFMGRPGVDYETNP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::.:.:::. :. .:::::::.:::::::::.:...::::::::::::::::::::::: gi|136 NYPEVLYEDW-TTPTDIGDTTNKSNEIPSTDVADQSNREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 LLLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 450 460 470 480 490 500 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA 510 520 530 540 550 560 620 630 640 650 660 670 hh1372 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 570 580 590 600 610 620 680 690 700 710 720 730 hh1372 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 630 640 650 660 670 680 740 750 760 770 780 hh1372 KIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRLS ::::::::::::::::::: gi|136 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 690 700 710 720 730 740 >>gi|2497561|sp|Q63604|NTRK2_RAT BDNF/NT-3 growth factor (821 aa) initn: 2587 init1: 2561 opt: 4533 Z-score: 4756.8 bits: 891.0 E(): 0 Smith-Waterman score: 4533; 92.807% identity (98.449% similar) in 709 aa overlap (47-755:1-708) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :: : ::::::::::::.: ::.:::::.. gi|249 MSPWPRWHGPAMARLWGLCLLVLGFWRASL 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY ::: :::::..::::..:::::::::::::::.::::::::.:::::::::::::::::: gi|249 ACPMSCKCSTTRIWCTEPSPGIVAFPRLEPNSIDPENITEILIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::.:::::::::::::.::::::.::.::::::::::::::.::::::::.:::.:::: gi|249 VGLKNLTIVDSGLKFVAYKAFLKNGNLRHINFTRNKLTSLSRRHFRHLDLSDLILTGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE ::::::::.:::::.:::::::::::::::::: ::::::::::::::: :::::::::: gi|249 TCSCDIMWLKTLQETKSSPDTQDLYCLNESSKNTPLANLQIPNCGLPSARLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::.:.::::.:::.:..:::::::::::::::::::::::::::::::::::::::::: gi|249 GKSVTISCSVGGDPLPTLYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|249 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVRGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::::::::::::::::::::::::::::.:::::::::.:::::::: ::.: .:: gi|249 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLMAKNEYGKDERQISAHFMGRPGVDYETNP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::.:.:::. :. .:::::::.:::::::::.:.:.::::::::::::::::::::::: gi|249 NYPEVLYEDW-TTPTDIGDTTNKSNEIPSTDVADQTNREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 LLLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 450 460 470 480 490 500 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA 510 520 530 540 550 560 620 630 640 650 660 670 hh1372 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 570 580 590 600 610 620 680 690 700 710 720 730 hh1372 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 630 640 650 660 670 680 740 750 760 770 780 hh1372 KIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRLS ::::::::::::::::::: gi|249 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 690 700 710 720 730 740 >>gi|3024774|sp|Q91987|NTRK2_CHICK BDNF/NT-3 growth fact (818 aa) initn: 2121 init1: 1841 opt: 3629 Z-score: 3808.1 bits: 715.5 E(): 1.8e-203 Smith-Waterman score: 3629; 75.070% identity (90.000% similar) in 710 aa overlap (47-755:1-705) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF : :: : ::..:::::.: ::.: ::.:. gi|302 MVSWRRRPGPGLARLWGLCCLVLGCWRGAL 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY .::.::.::. :::::.: :::..:: . :.. .:.:::.::::..:: ::...: : gi|302 GCPASCRCSSWRIWCSEPVPGITSFP-VPQRSTEDDNVTEIYIANQRKLESINDNEVGFY 40 50 60 70 80 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::.:::.:::::.::...::.:: :::.::..::::.:::.: :::: ::.:::: ::: gi|302 VGLKNLTVVDSGLRFVSRQAFVKNINLQYINLSRNKLSSLSKKPFRHLGLSDLILVDNPF 90 100 110 120 130 140 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE :::.::::: .::.: ..::.::.....: : : ....::: ::::::. :.:: : gi|302 KCSCEIMWIKKFQETKFYTEAQDIYCVDDNNKRIALMDMKVPNCDLPSANLSNYNITVVE 150 160 170 180 190 200 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::::: :...: : ::. : . ::::.: ..::.. .:: : :.:: ::: ::::::: gi|302 GKSITLYCDTTGGPPPNVSWVLTNLVSNHESDTSKNPASLTIKNVSSMDSGLWISCVAEN 210 220 230 240 250 260 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI .::: : :..::: :::.:::.:::: ::::::::::::::::.:::::.:::::::.:: gi|302 IVGEVQTSAELTVFFAPNITFIESPTPDHHWCIPFTVKGNPKPTLQWFYEGAILNESEYI 270 280 290 300 310 320 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::: :..:::::::::::::.::: :::.::::::.:::...::::. :: ::..: gi|302 CTKIHVINQSEYHGCLQLDNPTHLNNGAYTLLAKNEYGEDEKRVDAHFMSVPG--DGSGP 330 340 350 360 370 380 440 450 460 470 480 490 hh1372 NY-PDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLV ::: :: : :. ::.::::: ::.: : ::..: ... ..::.:: ::..: :.. gi|302 IVDPDV-YE-YETTPNDLGDTTNNSNQITSPDVSNKENEDSITVYVVVGIAALVCTGLVI 390 400 410 420 430 440 500 510 520 530 540 550 hh1372 MLFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIP ::..::..::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|302 MLIILKFGRHSKFGMKGPSSVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIP 450 460 470 480 490 500 560 570 580 590 600 610 hh1372 VIENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 VIENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILV 510 520 530 540 550 560 620 630 640 650 660 670 hh1372 AVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 AVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 570 580 590 600 610 620 680 690 700 710 720 730 hh1372 RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL :::::::::::::: :.::::::::::::::::::::::::::::::::::::::::::: gi|302 RAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 630 640 650 660 670 680 740 750 760 770 780 hh1372 VKIGDFGMSRDVYSTDYYRVSSCADQRPQGPLSLRDPCCICLLRLS :::::::::::::::::::: gi|302 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY 690 700 710 720 730 740 >>gi|18369865|gb|AAL67966.1|AF410900_1 neurotrophin rece (537 aa) initn: 3649 init1: 3621 opt: 3621 Z-score: 3801.9 bits: 713.7 E(): 4e-203 Smith-Waterman score: 3621; 99.811% identity (100.000% similar) in 529 aa overlap (47-575:1-529) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :::::::::::::::::::::::::::::: gi|183 MSSWIRWHGPAMARLWGFCWLVVGFWRAAF 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 450 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 460 470 480 490 500 510 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA ::::::::::::::::::. gi|183 IENPQYFGITNSQLKPDTWPRGSPKTA 520 530 >>gi|119583097|gb|EAW62693.1| neurotrophic tyrosine kina (532 aa) initn: 3620 init1: 3620 opt: 3620 Z-score: 3800.9 bits: 713.5 E(): 4.5e-203 Smith-Waterman score: 3620; 100.000% identity (100.000% similar) in 528 aa overlap (47-574:1-528) 20 30 40 50 60 70 hh1372 QAQGRPPRTGGGKRPVQRGDRHSGWHWLLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAF :::::::::::::::::::::::::::::: gi|119 MSSWIRWHGPAMARLWGFCWLVVGFWRAAF 10 20 30 80 90 100 110 120 130 hh1372 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDVEAY 40 50 60 70 80 90 140 150 160 170 180 190 hh1372 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPF 100 110 120 130 140 150 200 210 220 230 240 250 hh1372 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TCSCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEE 160 170 180 190 200 210 260 270 280 290 300 310 hh1372 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCVAEN 220 230 240 250 260 270 320 330 340 350 360 370 hh1372 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI 280 290 300 310 320 330 380 390 400 410 420 430 hh1372 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDGANP 340 350 360 370 380 390 440 450 460 470 480 490 hh1372 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NYPDVIYEDYGTAANDIGDTTNRSNEIPSTDVTDKTGREHLSVYAVVVIASVVGFCLLVM 400 410 420 430 440 450 500 510 520 530 540 550 hh1372 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LFLLKLARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPV 460 470 480 490 500 510 560 570 580 590 600 610 hh1372 IENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVA :::::::::::::::::: gi|119 IENPQYFGITNSQLKPDTCKYS 520 530 781 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 12:06:56 2008 done: Tue Aug 12 12:09:04 2008 Total Scan time: 989.470 Total Display time: 0.330 Function used was FASTA [version 34.26.5 April 26, 2007]