hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-12463626/chunk_1/iprscan-20080812-12463626.nocrc
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Query sequence: hh15590
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00608                                                 238.6    5.1e-67   1
SM00050                                                 160.3      2e-43   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00050    1/1     388   463 ..     1    81 []   160.3    2e-43
SM00608    1/1     464   607 ..     1   152 []   238.6  5.1e-67

Alignments of top-scoring domains:
SM00050: domain 1 of 1, from 388 to 463: score 160.3, E = 2e-43
                   *->EeGEECDCGspkeeCrttdpCCdpaTCkLkpgaqCadsGpCCekdCk
                      EeGEECDCG+p+ eC   ++CC+++TC+Lkp+a Ca +G+CCe dC+
     hh15590   388    EEGEECDCGEPE-EC--MNRCCNATTCTLKPDAVCA-HGLCCE-DCQ 429  

                   fkpaGtlCRpsvdeCDlpEYCnGtSaeCPpDvyv<-*
                   +kpaGt CR+s++ CDlpE+C+G S++CP++vy+   
     hh15590   430 LKPAGTACRDSSNSCDLPEFCTGASPHCPANVYL    463  

SM00608: domain 1 of 1, from 464 to 607: score 238.6, E = 5.1e-67
                   *->qDGtPCdngqgYCynGrCptrdqQCqalFGpgAkvApdsCYeevNsk
                      +DG+ C++  gYCynG C+t++qQC +l+GpgAk+Ap  C+e+vNs 
     hh15590   464    HDGHSCQDVDGYCYNGICQTHEQQCVTLWGPGAKPAPGICFERVNSA 510  

                   GdrfGNCGrensangtyipCapeDvkCGkLqCtnvtelPllgehatviqs
                   Gd +GNCG+ +  ++++ +C+++D+kCGk+qC+++ ++P++g +a+ i +
     hh15590   511 GDPYGNCGKVS--KSSFAKCEMRDAKCGKIQCQGGASRPVIGTNAVSIET 558  

                   niggyi.q.kgitCwgtdyhlgtdPvdltidpDpGlVkdGTkCGpgKVCi
                   ni    +q+  i C+gt+++lg+d      +pDpGlV  GTkC++gK+C+
     hh15590   559 NI--PLqQgGRILCRGTHVYLGDD------MPDPGLVLAGTKCADGKICL 600  

                   ngrCvdv<-*
                   n++C+++   
     hh15590   601 NRQCQNI    607  

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