# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohj01580.fasta.nr -Q hj01580.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hj01580, 300 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6812905 sequences Expectation_n fit: rho(ln(x))= 5.7679+/-0.000201; mu= 7.2841+/- 0.011 mean_var=121.9342+/-23.579, 0's: 45 Z-trim: 169 B-trim: 364 in 2/63 Lambda= 0.116148 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087384|dbj|BAD92139.1| fusion (involved in t( ( 300) 2189 377.4 1.6e-102 gi|109128310|ref|XP_001112596.1| PREDICTED: simila ( 319) 1915 331.5 1.1e-88 gi|119572537|gb|EAW52152.1| fusion (involved in t( ( 321) 1915 331.5 1.1e-88 gi|114662164|ref|XP_001158324.1| PREDICTED: simila ( 323) 1915 331.5 1.1e-88 gi|1172095|gb|AAC13543.1| pigpen [Bos taurus] ( 512) 1915 331.7 1.5e-88 gi|116241371|sp|Q28009|FUS_BOVIN RNA-binding prote ( 513) 1915 331.7 1.5e-88 gi|114662158|ref|XP_001158502.1| PREDICTED: simila ( 523) 1915 331.7 1.5e-88 gi|3582783|gb|AAC35284.1| FUS/TLS protein [Homo sa ( 525) 1915 331.7 1.5e-88 gi|158255308|dbj|BAF83625.1| unnamed protein produ ( 525) 1915 331.7 1.5e-88 gi|544357|sp|P35637.1|FUS_HUMAN RNA-binding protei ( 526) 1915 331.7 1.5e-88 gi|19913512|gb|AAH26062.1| Fusion (involved in t(1 ( 526) 1915 331.7 1.5e-88 gi|30584649|gb|AAP36577.1| Homo sapiens fusion, de ( 527) 1915 331.7 1.5e-88 gi|114662160|ref|XP_001158561.1| PREDICTED: simila ( 529) 1915 331.7 1.5e-88 gi|109128306|ref|XP_001112691.1| PREDICTED: simila ( 533) 1915 331.7 1.5e-88 gi|90075012|dbj|BAE87186.1| unnamed protein produc ( 533) 1915 331.7 1.5e-88 gi|194218995|ref|XP_001500625.2| PREDICTED: simila ( 520) 1907 330.4 3.8e-88 gi|1040970|gb|AAA79948.1| fus-like protein ( 528) 1907 330.4 3.8e-88 gi|126334532|ref|XP_001364792.1| PREDICTED: simila ( 527) 1899 329.0 9.7e-88 gi|448295|prf||1916411B TLS protein ( 260) 1892 327.5 1.4e-87 gi|148685672|gb|EDL17619.1| fusion, derived from t ( 445) 1895 328.3 1.4e-87 gi|26252108|gb|AAH40827.1| Fusion, derived from t( ( 517) 1895 328.4 1.5e-87 gi|74145855|dbj|BAE24196.1| unnamed protein produc ( 518) 1895 328.4 1.5e-87 gi|8928084|sp|P56959|FUS_MOUSE RNA-binding protein ( 518) 1895 328.4 1.5e-87 gi|148685673|gb|EDL17620.1| fusion, derived from t ( 531) 1895 328.4 1.5e-87 gi|149067653|gb|EDM17205.1| rCG39872, isoform CRA_ ( 445) 1889 327.3 2.8e-87 gi|56268930|gb|AAH87153.1| Fusion, derived from t( ( 518) 1889 327.3 3.1e-87 gi|109128308|ref|XP_001112628.1| PREDICTED: simila ( 503) 1887 327.0 3.8e-87 gi|74226636|dbj|BAE26972.1| unnamed protein produc ( 518) 1886 326.8 4.3e-87 gi|114662162|ref|XP_001158109.1| PREDICTED: simila ( 523) 1845 320.0 5.1e-85 gi|149472418|ref|XP_001517600.1| PREDICTED: simila ( 561) 1842 319.5 7.6e-85 gi|148685669|gb|EDL17616.1| fusion, derived from t ( 506) 1804 313.1 5.8e-83 gi|149067649|gb|EDM17201.1| rCG39872, isoform CRA_ ( 506) 1798 312.1 1.2e-82 gi|109511562|ref|XP_001060226.1| PREDICTED: simila ( 516) 1780 309.1 9.6e-82 gi|49522198|gb|AAH74437.1| MGC84691 protein [Xenop ( 536) 1629 283.8 4.1e-74 gi|89271358|emb|CAJ83479.1| fusion (involved in t( ( 539) 1629 283.8 4.1e-74 gi|27881721|gb|AAH44319.1| Fus protein [Xenopus la ( 536) 1585 276.4 6.7e-72 gi|194386744|dbj|BAG61182.1| unnamed protein produ ( 429) 1559 272.0 1.2e-70 gi|148685671|gb|EDL17618.1| fusion, derived from t ( 205) 1535 267.6 1.2e-69 gi|149067651|gb|EDM17203.1| rCG39872, isoform CRA_ ( 205) 1529 266.6 2.4e-69 gi|73958282|ref|XP_856620.1| PREDICTED: similar to ( 207) 1480 258.4 7.1e-67 gi|47420845|gb|AAT27458.1| FUS/TLS [Gallus gallus] ( 504) 1444 252.8 8.4e-65 gi|47217983|emb|CAG02266.1| unnamed protein produc ( 254) 1360 238.4 9.1e-61 gi|73958284|ref|XP_856664.1| PREDICTED: similar to ( 185) 1248 219.4 3.3e-55 gi|73994899|ref|XP_865016.1| PREDICTED: similar to ( 606) 1084 192.5 1.4e-46 gi|118763905|gb|AAI28852.1| Zgc:158363 [Danio reri ( 434) 1067 189.5 7.9e-46 gi|73966767|ref|XP_867679.1| PREDICTED: similar to ( 501) 1055 187.6 3.5e-45 gi|73958294|ref|XP_856863.1| PREDICTED: similar to ( 294) 1012 180.1 3.6e-43 gi|73994895|ref|XP_864980.1| PREDICTED: similar to ( 615) 971 173.6 6.9e-41 gi|49257736|gb|AAH74568.1| MGC69517 protein [Xenop ( 501) 962 172.0 1.7e-40 gi|73994885|ref|XP_864885.1| PREDICTED: similar to ( 586) 958 171.4 3e-40 >>gi|62087384|dbj|BAD92139.1| fusion (involved in t(12;1 (300 aa) initn: 2189 init1: 2189 opt: 2189 Z-score: 1996.0 bits: 377.4 E(): 1.6e-102 Smith-Waterman score: 2189; 100.000% identity (100.000% similar) in 300 aa overlap (1-300:1-300) 10 20 30 40 50 60 hj0158 YFTSLDLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YFTSLDLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNT 10 20 30 40 50 60 70 80 90 100 110 120 hj0158 IFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPS 70 80 90 100 110 120 130 140 150 160 170 180 hj0158 AKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGG 130 140 150 160 170 180 190 200 210 220 230 240 hj0158 RGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGG 190 200 210 220 230 240 250 260 270 280 290 300 hj0158 NYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 250 260 270 280 290 300 >>gi|109128310|ref|XP_001112596.1| PREDICTED: similar to (319 aa) initn: 1915 init1: 1915 opt: 1915 Z-score: 1747.5 bits: 331.5 E(): 1.1e-88 Smith-Waterman score: 1915; 99.240% identity (99.620% similar) in 263 aa overlap (38-300:57-319) 10 20 30 40 50 60 hj0158 VLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQGLG :. ::::::::::::::::::::::::::: gi|109 AVVAAAVVVVTTAAVVAMNPEVVEVAVEAEVAWGPRDQGSRHDSEQDNSDNNTIFVQGLG 30 40 50 60 70 80 70 80 90 100 110 120 hj0158 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 90 100 110 120 130 140 130 140 150 160 170 180 hj0158 FDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSG 150 160 170 180 190 200 190 200 210 220 230 240 hj0158 GGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRR 210 220 230 240 250 260 250 260 270 280 290 300 hj0158 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 270 280 290 300 310 >>gi|119572537|gb|EAW52152.1| fusion (involved in t(12;1 (321 aa) initn: 1915 init1: 1915 opt: 1915 Z-score: 1747.5 bits: 331.5 E(): 1.1e-88 Smith-Waterman score: 1915; 99.240% identity (99.620% similar) in 263 aa overlap (38-300:59-321) 10 20 30 40 50 60 hj0158 VLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQGLG :. ::::::::::::::::::::::::::: gi|119 VAAAAAAVVVTTAAVVAMNPEVVEVAVEAEVAWGPRDQGSRHDSEQDNSDNNTIFVQGLG 30 40 50 60 70 80 70 80 90 100 110 120 hj0158 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 90 100 110 120 130 140 130 140 150 160 170 180 hj0158 FDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSG 150 160 170 180 190 200 190 200 210 220 230 240 hj0158 GGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRR 210 220 230 240 250 260 250 260 270 280 290 300 hj0158 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 270 280 290 300 310 320 >>gi|114662164|ref|XP_001158324.1| PREDICTED: similar to (323 aa) initn: 1915 init1: 1915 opt: 1915 Z-score: 1747.5 bits: 331.5 E(): 1.1e-88 Smith-Waterman score: 1915; 99.240% identity (99.620% similar) in 263 aa overlap (38-300:61-323) 10 20 30 40 50 60 hj0158 VLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQGLG :. ::::::::::::::::::::::::::: gi|114 AAAAAAAVVVTTAAVVAMNPEVVEVAVEAEVAWGPRDQGSRHDSEQDNSDNNTIFVQGLG 40 50 60 70 80 90 70 80 90 100 110 120 hj0158 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 100 110 120 130 140 150 130 140 150 160 170 180 hj0158 FDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSG 160 170 180 190 200 210 190 200 210 220 230 240 hj0158 GGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRR 220 230 240 250 260 270 250 260 270 280 290 300 hj0158 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 280 290 300 310 320 >>gi|1172095|gb|AAC13543.1| pigpen [Bos taurus] gi|2 (512 aa) initn: 1913 init1: 1913 opt: 1915 Z-score: 1745.0 bits: 331.7 E(): 1.5e-88 Smith-Waterman score: 1915; 98.491% identity (98.868% similar) in 265 aa overlap (36-300:248-512) 10 20 30 40 50 60 hj0158 DLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQG :. ::::::::::::::::::::::::: gi|117 YNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQG 220 230 240 250 260 270 70 80 90 100 110 120 hj0158 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 280 290 300 310 320 330 130 140 150 160 170 180 hj0158 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP 340 350 360 370 380 390 190 200 210 220 230 240 hj0158 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD 400 410 420 430 440 450 250 260 270 280 290 300 hj0158 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 460 470 480 490 500 510 >>gi|116241371|sp|Q28009|FUS_BOVIN RNA-binding protein F (513 aa) initn: 1913 init1: 1913 opt: 1915 Z-score: 1745.0 bits: 331.7 E(): 1.5e-88 Smith-Waterman score: 1915; 98.491% identity (98.868% similar) in 265 aa overlap (36-300:249-513) 10 20 30 40 50 60 hj0158 DLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQG :. ::::::::::::::::::::::::: gi|116 YNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQG 220 230 240 250 260 270 70 80 90 100 110 120 hj0158 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 280 290 300 310 320 330 130 140 150 160 170 180 hj0158 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP 340 350 360 370 380 390 190 200 210 220 230 240 hj0158 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD 400 410 420 430 440 450 250 260 270 280 290 300 hj0158 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 460 470 480 490 500 510 >>gi|114662158|ref|XP_001158502.1| PREDICTED: similar to (523 aa) initn: 1913 init1: 1913 opt: 1915 Z-score: 1744.9 bits: 331.7 E(): 1.5e-88 Smith-Waterman score: 1915; 98.491% identity (98.868% similar) in 265 aa overlap (36-300:259-523) 10 20 30 40 50 60 hj0158 DLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQG :. ::::::::::::::::::::::::: gi|114 YNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQG 230 240 250 260 270 280 70 80 90 100 110 120 hj0158 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 290 300 310 320 330 340 130 140 150 160 170 180 hj0158 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP 350 360 370 380 390 400 190 200 210 220 230 240 hj0158 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD 410 420 430 440 450 460 250 260 270 280 290 300 hj0158 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 470 480 490 500 510 520 >>gi|3582783|gb|AAC35284.1| FUS/TLS protein [Homo sapien (525 aa) initn: 1913 init1: 1913 opt: 1915 Z-score: 1744.9 bits: 331.7 E(): 1.5e-88 Smith-Waterman score: 1915; 98.491% identity (98.868% similar) in 265 aa overlap (36-300:261-525) 10 20 30 40 50 60 hj0158 DLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQG :. ::::::::::::::::::::::::: gi|358 YNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQG 240 250 260 270 280 290 70 80 90 100 110 120 hj0158 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|358 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 300 310 320 330 340 350 130 140 150 160 170 180 hj0158 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|358 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP 360 370 380 390 400 410 190 200 210 220 230 240 hj0158 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|358 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD 420 430 440 450 460 470 250 260 270 280 290 300 hj0158 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|358 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 480 490 500 510 520 >>gi|158255308|dbj|BAF83625.1| unnamed protein product [ (525 aa) initn: 1913 init1: 1913 opt: 1915 Z-score: 1744.9 bits: 331.7 E(): 1.5e-88 Smith-Waterman score: 1915; 98.491% identity (98.868% similar) in 265 aa overlap (36-300:261-525) 10 20 30 40 50 60 hj0158 DLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQG :. ::::::::::::::::::::::::: gi|158 YNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQG 240 250 260 270 280 290 70 80 90 100 110 120 hj0158 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 300 310 320 330 340 350 130 140 150 160 170 180 hj0158 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP 360 370 380 390 400 410 190 200 210 220 230 240 hj0158 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD 420 430 440 450 460 470 250 260 270 280 290 300 hj0158 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 480 490 500 510 520 >>gi|544357|sp|P35637.1|FUS_HUMAN RNA-binding protein FU (526 aa) initn: 1913 init1: 1913 opt: 1915 Z-score: 1744.9 bits: 331.7 E(): 1.5e-88 Smith-Waterman score: 1915; 98.491% identity (98.868% similar) in 265 aa overlap (36-300:262-526) 10 20 30 40 50 60 hj0158 DLVLIFFLVRFFLLTNGSSFPCFCFFFVLFFHVTKGPRDQGSRHDSEQDNSDNNTIFVQG :. ::::::::::::::::::::::::: gi|544 YNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQG 240 250 260 270 280 290 70 80 90 100 110 120 hj0158 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 LGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 300 310 320 330 340 350 130 140 150 160 170 180 hj0158 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 DWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFP 360 370 380 390 400 410 190 200 210 220 230 240 hj0158 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 SGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDD 420 430 440 450 460 470 250 260 270 280 290 300 hj0158 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 RRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY 480 490 500 510 520 300 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 14:01:17 2008 done: Tue Aug 12 14:03:59 2008 Total Scan time: 736.890 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]