hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-14040081/chunk_1/iprscan-20080812-14040081.nocrc
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Query sequence: hj01580
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                  69.4    4.4e-16   1
SM00547                                                  28.3     0.0011   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/1      60   141 ..     1   121 []    69.4  4.4e-16
SM00547    1/1     198   224 ..     1    25 []    28.3   0.0011

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 60 to 141: score 69.4, E = 4.4e-16
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      t+fV +L   ++vt e + ++F              ++ G +++   
     hj01580    60    TIFVQGL--GENVTIESVADYF--------------KQIG-IIKTNK 89   

                   vrdkdnilirr.essleqkvqlgkdsgTGkskGfaFVeFedeedAekAll
                    +   +i+ +++++             TGk kG a V F+d+ +A++A  
     hj01580    90 KTGQPMINLYTdRE-------------TGKLKGEATVSFDDPPSAKAA-- 124  

                   iealnaskGkeledgGrptlglrVe<-*
                   i+ ++   Gke+   G+p   ++V+   
     hj01580   125 IDWFD---GKEF--SGNP---IKVS    141  

SM00547: domain 1 of 1, from 198 to 224: score 28.3, E = 0.0011
                   *->gdWeCpa..CtflNfasrskCfaCgap<-*
                      gdW+Cp ++C ++Nf+ r++C++C+ap   
     hj01580   198    GDWKCPNptCENMNFSWRNECNQCKAP    224  

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