# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohj02840.fasta.nr -Q hj02840.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hj02840, 119 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6843067 sequences Expectation_n fit: rho(ln(x))= 4.7035+/-0.000179; mu= 8.0142+/- 0.010 mean_var=60.6729+/-11.787, 0's: 47 Z-trim: 47 B-trim: 2 in 1/67 Lambda= 0.164656 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087616|dbj|BAD92255.1| FK506 binding protein ( 119) 788 194.6 2.6e-48 gi|23396601|sp|Q9NYL4|FKB11_HUMAN FK506-binding pr ( 201) 474 120.1 1.1e-25 gi|114644980|ref|XP_001159891.1| PREDICTED: simila ( 204) 474 120.2 1.1e-25 gi|109096409|ref|XP_001104575.1| PREDICTED: simila ( 204) 469 119.0 2.6e-25 gi|149714478|ref|XP_001504182.1| PREDICTED: simila ( 201) 454 115.4 3e-24 gi|73996823|ref|XP_851205.1| PREDICTED: similar to ( 102) 448 113.8 4.8e-24 gi|149032128|gb|EDL87040.1| FK506 binding protein ( 99) 443 112.6 1.1e-23 gi|23396599|sp|Q9D1M7|FKB11_MOUSE FK506-binding pr ( 201) 445 113.3 1.3e-23 gi|149032127|gb|EDL87039.1| FK506 binding protein ( 201) 443 112.8 1.8e-23 gi|122138212|sp|Q2YDL5|FKB11_BOVIN FK506-binding p ( 203) 423 108.0 5e-22 gi|12859176|dbj|BAB31559.1| unnamed protein produc ( 198) 422 107.8 5.7e-22 gi|149490915|ref|XP_001516326.1| PREDICTED: hypoth ( 71) 358 92.3 9.8e-18 gi|47229576|emb|CAG06772.1| unnamed protein produc ( 196) 223 60.5 9.7e-08 gi|27801585|emb|CAD60658.1| novel protein [Danio r ( 192) 219 59.6 1.8e-07 >>gi|62087616|dbj|BAD92255.1| FK506 binding protein prec (119 aa) initn: 788 init1: 788 opt: 788 Z-score: 1022.5 bits: 194.6 E(): 2.6e-48 Smith-Waterman score: 788; 100.000% identity (100.000% similar) in 119 aa overlap (1-119:1-119) 10 20 30 40 50 60 hj0284 RNSSPHLNLVSFIVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RNSSPHLNLVSFIVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIA 10 20 30 40 50 60 70 80 90 100 110 hj0284 LIRANYWLKLVKGILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LIRANYWLKLVKGILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK 70 80 90 100 110 >>gi|23396601|sp|Q9NYL4|FKB11_HUMAN FK506-binding protei (201 aa) initn: 474 init1: 474 opt: 474 Z-score: 616.2 bits: 120.1 E(): 1.1e-25 Smith-Waterman score: 474; 96.104% identity (97.403% similar) in 77 aa overlap (43-119:125-201) 20 30 40 50 60 70 hj0284 IVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLVK : . :::::::::::::::::::::::::: gi|233 GLEQSLLDMCVGEKRRAIIPSHLAYGKRGFPPSVPADAVVQYDVELIALIRANYWLKLVK 100 110 120 130 140 150 80 90 100 110 hj0284 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK ::::::::::::::::::::::::::::::::::::::::::::::: gi|233 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK 160 170 180 190 200 >>gi|114644980|ref|XP_001159891.1| PREDICTED: similar to (204 aa) initn: 474 init1: 474 opt: 474 Z-score: 616.1 bits: 120.2 E(): 1.1e-25 Smith-Waterman score: 474; 96.104% identity (97.403% similar) in 77 aa overlap (43-119:128-204) 20 30 40 50 60 70 hj0284 IVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLVK : . :::::::::::::::::::::::::: gi|114 GLEQSLLDMCVGEKRRAIIPSHLAYGKRGFPPSVPADAVVQYDVELIALIRANYWLKLVK 100 110 120 130 140 150 80 90 100 110 hj0284 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK ::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK 160 170 180 190 200 >>gi|109096409|ref|XP_001104575.1| PREDICTED: similar to (204 aa) initn: 469 init1: 469 opt: 469 Z-score: 609.7 bits: 119.0 E(): 2.6e-25 Smith-Waterman score: 469; 94.805% identity (97.403% similar) in 77 aa overlap (43-119:128-204) 20 30 40 50 60 70 hj0284 IVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLVK : . :::::::::::::::::::::::::: gi|109 GLEQSLLDMCVGEKRRAIIPSHLAYGKRGFPPSVPADAVVQYDVELIALIRANYWLKLVK 100 110 120 130 140 150 80 90 100 110 hj0284 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK :::::::::.::::::::::::::::::::::::::::::::::::: gi|109 GILPLVGMAIVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK 160 170 180 190 200 >>gi|149714478|ref|XP_001504182.1| PREDICTED: similar to (201 aa) initn: 454 init1: 454 opt: 454 Z-score: 590.5 bits: 115.4 E(): 3e-24 Smith-Waterman score: 454; 90.909% identity (96.104% similar) in 77 aa overlap (43-119:125-201) 20 30 40 50 60 70 hj0284 IVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLVK : . :::::.:.::::::::::::: :::: gi|149 GLEQSLLDMCVGEKRRVIIPSHLAYGKRGFPPSIPADAVLQFDVELIALIRANYWQKLVK 100 110 120 130 140 150 80 90 100 110 hj0284 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK :::::::::::::::::::::::.::::::::::::::::::::::: gi|149 GILPLVGMAMVPALLGLIGYHLYKKANRPKVSKKKLKEEKRNKSKKK 160 170 180 190 200 >>gi|73996823|ref|XP_851205.1| PREDICTED: similar to FK5 (102 aa) initn: 448 init1: 448 opt: 448 Z-score: 586.9 bits: 113.8 E(): 4.8e-24 Smith-Waterman score: 448; 89.610% identity (96.104% similar) in 77 aa overlap (43-119:26-102) 20 30 40 50 60 70 hj0284 IVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLVK : . :::::.:.::::::::::::: :::: gi|739 MCIPSLREKRRAIIPSHLAYGKRGFPPSIPADAVLQFDVELIALIRANYWQKLVK 10 20 30 40 50 80 90 100 110 hj0284 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK :::::::::::::::::::::::.::.:::::::::::::::::::: gi|739 GILPLVGMAMVPALLGLIGYHLYKKASRPKVSKKKLKEEKRNKSKKK 60 70 80 90 100 >>gi|149032128|gb|EDL87040.1| FK506 binding protein 11, (99 aa) initn: 443 init1: 443 opt: 443 Z-score: 580.7 bits: 112.6 E(): 1.1e-23 Smith-Waterman score: 443; 87.179% identity (94.872% similar) in 78 aa overlap (42-119:22-99) 20 30 40 50 60 70 hj0284 FIVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLV .: . ::::::::::::::::::::: ::. gi|149 MCVGEKRRAVIPSHLAYGKRGYPPSIPADAVVQYDVELIALIRANYWQKLL 10 20 30 40 50 80 90 100 110 hj0284 KGILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK ::::::::::::::::::::::::.::. :.::::::::::::::::: gi|149 KGILPLVGMAMVPALLGLIGYHLYKKASTPRVSKKKLKEEKRNKSKKK 60 70 80 90 >>gi|23396599|sp|Q9D1M7|FKB11_MOUSE FK506-binding protei (201 aa) initn: 445 init1: 445 opt: 445 Z-score: 579.0 bits: 113.3 E(): 1.3e-23 Smith-Waterman score: 445; 88.462% identity (96.154% similar) in 78 aa overlap (42-119:124-201) 20 30 40 50 60 70 hj0284 FIVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLV .: . ::::::::::::::::::::: ::. gi|233 PGLEQSLLDMCVGEKRRAVIPSHLAYGKRGYPPSIPADAVVQYDVELIALIRANYWQKLL 100 110 120 130 140 150 80 90 100 110 hj0284 KGILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK :.::::::.::::::::::::::::::.:::::::::::::::::::: gi|233 KSILPLVGIAMVPALLGLIGYHLYRKASRPKVSKKKLKEEKRNKSKKK 160 170 180 190 200 >>gi|149032127|gb|EDL87039.1| FK506 binding protein 11, (201 aa) initn: 443 init1: 443 opt: 443 Z-score: 576.4 bits: 112.8 E(): 1.8e-23 Smith-Waterman score: 443; 87.179% identity (94.872% similar) in 78 aa overlap (42-119:124-201) 20 30 40 50 60 70 hj0284 FIVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLV .: . ::::::::::::::::::::: ::. gi|149 PGLEQSLLDMCVGEKRRAVIPSHLAYGKRGYPPSIPADAVVQYDVELIALIRANYWQKLL 100 110 120 130 140 150 80 90 100 110 hj0284 KGILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK ::::::::::::::::::::::::.::. :.::::::::::::::::: gi|149 KGILPLVGMAMVPALLGLIGYHLYKKASTPRVSKKKLKEEKRNKSKKK 160 170 180 190 200 >>gi|122138212|sp|Q2YDL5|FKB11_BOVIN FK506-binding prote (203 aa) initn: 423 init1: 423 opt: 423 Z-score: 550.7 bits: 108.0 E(): 5e-22 Smith-Waterman score: 423; 84.416% identity (93.506% similar) in 77 aa overlap (43-119:127-203) 20 30 40 50 60 70 hj0284 IVVGFAVAYAPYFHSDSEPWIKCRESNPLHPSASPADAVVQYDVELIALIRANYWLKLVK : . :::: ...::::::::::::: :::: gi|122 GLEQSLLDMCVGEKRRVIIPSHLAYGKRGFPPSIPADAELHFDVELIALIRANYWQKLVK 100 110 120 130 140 150 80 90 100 110 hj0284 GILPLVGMAMVPALLGLIGYHLYRKANRPKVSKKKLKEEKRNKSKKK ::::::::::::::::::::::::::. ::.::.::::::::::::: gi|122 GILPLVGMAMVPALLGLIGYHLYRKASSPKISKNKLKEEKRNKSKKK 160 170 180 190 200 119 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 15:19:29 2008 done: Tue Aug 12 15:22:33 2008 Total Scan time: 527.280 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]