hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-15285664/chunk_1/iprscan-20080812-15285664.nocrc
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Query sequence: hj02913
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00315                                                  28.0     0.0011   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00315    1/1       4   108 ..     1   121 []    28.0   0.0011

Alignments of top-scoring domains:
SM00315: domain 1 of 1, from 4 to 108: score 28.0, E = 0.0011
                   *->sleklLendpiGrllFreFLksefseykenleFWlaveefkkaed..
                      +l ++  +     llF  F      + + +l+      ++  ++  +
     hj02913     4    TLSHVP-RRTPMSLLF--FASEIQRV-HCHLQVTTKHTGLHPQQGyr 46   

                   .eersskAreIydkylspeapkesevnldsdtreeieenleepppdlFde
                   + e  ++A                +vnlds tree+ +n+ ep+ ++Fde
     hj02913    47 sNEALAFA-------------P--QVNLDSCTREETSRNMLEPTITCFDE 81   

                   AqrevyellekdsyprFLkSdyYlrfL<-*
                   Aq+ +++l+ekdsy+rFLkS +Yl+++   
     hj02913    82 AQKKIFNLMEKDSYRRFLKSRFYLDLV    108  

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