# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohj02958.fasta.nr -Q hj02958.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hj02958, 619 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6836901 sequences Expectation_n fit: rho(ln(x))= 5.5367+/-0.000192; mu= 11.1506+/- 0.011 mean_var=89.8101+/-17.375, 0's: 38 Z-trim: 89 B-trim: 412 in 1/65 Lambda= 0.135335 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|6166580|sp|Q14995.2|NR1D2_HUMAN Nuclear recepto ( 579) 3895 770.7 0 gi|60829127|gb|AAX36866.1| nuclear receptor subfam ( 580) 3895 770.7 0 gi|48146985|emb|CAG33715.1| NR1D2 [Homo sapiens] ( 579) 3889 769.5 0 gi|114585699|ref|XP_516330.2| PREDICTED: nuclear r ( 579) 3878 767.4 0 gi|28279409|gb|AAH45613.1| Nuclear receptor subfam ( 579) 3865 764.9 0 gi|471081|gb|AAA65937.1| orphan nuclear hormone re ( 579) 3863 764.5 0 gi|73989968|ref|XP_542763.2| PREDICTED: similar to ( 576) 3783 748.9 9.1e-214 gi|194221546|ref|XP_001492528.2| PREDICTED: simila ( 655) 3780 748.3 1.5e-213 gi|62087762|dbj|BAD92328.1| Orphan nuclear recepto ( 549) 3689 730.5 3e-208 gi|148688702|gb|EDL20649.1| nuclear receptor subfa ( 599) 3614 715.9 8.1e-204 gi|26347753|dbj|BAC37525.1| unnamed protein produc ( 576) 3591 711.4 1.8e-202 gi|6166581|sp|Q60674.1|NR1D2_MOUSE Nuclear recepto ( 576) 3585 710.2 4e-202 gi|6166582|sp|Q63504.1|NR1D2_RAT Nuclear receptor ( 578) 3550 703.4 4.5e-200 gi|109052560|ref|XP_001089921.1| PREDICTED: nuclea ( 647) 3477 689.1 9.6e-196 gi|119918335|ref|XP_610586.3| PREDICTED: similar t ( 585) 3449 683.6 4e-194 gi|119584745|gb|EAW64341.1| nuclear receptor subfa ( 504) 3413 676.6 4.6e-192 gi|149634161|ref|XP_001509051.1| PREDICTED: simila ( 657) 3398 673.7 4.3e-191 gi|507211|gb|AAC52144.1| Rev-Erb-beta ( 542) 3375 669.2 8.3e-190 gi|126341712|ref|XP_001380756.1| PREDICTED: simila ( 575) 3344 663.1 5.8e-188 gi|687735|gb|AAA62508.1| Rev-ErbA-beta ( 533) 3268 648.3 1.6e-183 gi|758418|gb|AAA64750.1| orphan nuclear receptor H ( 494) 2919 580.1 4.9e-163 gi|1429379|emb|CAA56551.1| REV-ERBb [Gallus gallus ( 549) 2896 575.6 1.2e-161 gi|47124048|gb|AAH70035.1| NR1D2 protein [Homo sap ( 408) 2634 524.4 2.4e-146 gi|194373413|dbj|BAG56802.1| unnamed protein produ ( 385) 2582 514.2 2.6e-143 gi|73989974|ref|XP_862785.1| PREDICTED: similar to ( 405) 2524 502.9 7e-140 gi|26344309|dbj|BAC35811.1| unnamed protein produc ( 381) 2343 467.5 2.9e-129 gi|695709|emb|CAA55014.1| Rev-erb-Beta2 [Rattus no ( 383) 2313 461.7 1.7e-127 gi|119584744|gb|EAW64340.1| nuclear receptor subfa ( 333) 2152 430.2 4.4e-118 gi|73989970|ref|XP_862737.1| PREDICTED: similar to ( 498) 1960 392.9 1.2e-106 gi|123797485|sp|Q3UV55.1|NR1D1_MOUSE Nuclear recep ( 615) 1738 349.6 1.5e-93 gi|14290448|gb|AAH08989.1| Nuclear receptor subfam ( 615) 1738 349.6 1.5e-93 gi|74138696|dbj|BAE27164.1| unnamed protein produc ( 615) 1731 348.2 3.9e-93 gi|164663889|ref|NP_001106893.1| nuclear receptor ( 615) 1726 347.2 7.6e-93 gi|149723858|ref|XP_001500631.1| PREDICTED: simila ( 615) 1724 346.9 1e-92 gi|119100|sp|P20393.1|NR1D1_HUMAN Nuclear receptor ( 614) 1722 346.5 1.3e-92 gi|60654203|gb|AAX29794.1| nuclear receptor subfam ( 615) 1722 346.5 1.3e-92 gi|160332191|sp|Q63503.2|NR1D1_RAT Nuclear recepto ( 615) 1721 346.3 1.5e-92 gi|126308170|ref|XP_001370296.1| PREDICTED: simila ( 622) 1715 345.1 3.4e-92 gi|149054137|gb|EDM05954.1| nuclear receptor subfa ( 614) 1714 344.9 3.9e-92 gi|115305248|gb|AAI23489.1| Nuclear receptor subfa ( 613) 1709 343.9 7.6e-92 gi|5804932|emb|CAB53540.1| Rev-ErbAalpha protein [ ( 614) 1709 343.9 7.6e-92 gi|157399613|gb|ABV53446.1| rev-erb alpha [Ovis ar ( 614) 1697 341.6 3.9e-91 gi|149054136|gb|EDM05953.1| nuclear receptor subfa ( 508) 1690 340.2 8.6e-91 gi|514964|gb|AAA74939.1| Rev-erbA-alpha protein ( 508) 1665 335.3 2.5e-89 gi|73989972|ref|XP_862760.1| PREDICTED: similar to ( 522) 1641 330.6 6.7e-88 gi|148709885|gb|EDL41831.1| mCG52293 [Mus musculus ( 362) 1554 313.5 6.6e-83 gi|49257184|gb|AAH74065.1| Rev erb beta 2 [Danio r ( 578) 1387 281.0 6.1e-73 gi|14994043|gb|AAK76396.1| Rev-Erb beta 2 [Danio r ( 592) 1386 280.9 7.2e-73 gi|159795549|pdb|2V0V|A Chain A, Crystal Structure ( 194) 1221 248.2 1.5e-63 gi|159795562|pdb|2V7C|A Chain A, Crystal Structure ( 194) 1171 238.5 1.3e-60 >>gi|6166580|sp|Q14995.2|NR1D2_HUMAN Nuclear receptor su (579 aa) initn: 3895 init1: 3895 opt: 3895 Z-score: 4111.1 bits: 770.7 E(): 0 Smith-Waterman score: 3895; 100.000% identity (100.000% similar) in 579 aa overlap (41-619:1-579) 20 30 40 50 60 70 hj0295 PGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPASCHSEGSE :::::::::::::::::::::::::::::: gi|616 MEVNAGGVIAYISSSSSASSPASCHSEGSE 10 20 30 80 90 100 110 120 130 hj0295 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH 40 50 60 70 80 90 140 150 160 170 180 190 hj0295 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR 100 110 120 130 140 150 200 210 220 230 240 250 hj0295 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND 160 170 180 190 200 210 260 270 280 290 300 310 hj0295 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE 220 230 240 250 260 270 320 330 340 350 360 370 hj0295 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY 280 290 300 310 320 330 380 390 400 410 420 430 hj0295 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP 340 350 360 370 380 390 440 450 460 470 480 490 hj0295 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF 400 410 420 430 440 450 500 510 520 530 540 550 hj0295 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV 460 470 480 490 500 510 560 570 580 590 600 610 hj0295 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE 520 530 540 550 560 570 hj0295 ELLAFKVHP ::::::::: gi|616 ELLAFKVHP >>gi|60829127|gb|AAX36866.1| nuclear receptor subfamily (580 aa) initn: 3895 init1: 3895 opt: 3895 Z-score: 4111.1 bits: 770.7 E(): 0 Smith-Waterman score: 3895; 100.000% identity (100.000% similar) in 579 aa overlap (41-619:1-579) 20 30 40 50 60 70 hj0295 PGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPASCHSEGSE :::::::::::::::::::::::::::::: gi|608 MEVNAGGVIAYISSSSSASSPASCHSEGSE 10 20 30 80 90 100 110 120 130 hj0295 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH 40 50 60 70 80 90 140 150 160 170 180 190 hj0295 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR 100 110 120 130 140 150 200 210 220 230 240 250 hj0295 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND 160 170 180 190 200 210 260 270 280 290 300 310 hj0295 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE 220 230 240 250 260 270 320 330 340 350 360 370 hj0295 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY 280 290 300 310 320 330 380 390 400 410 420 430 hj0295 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP 340 350 360 370 380 390 440 450 460 470 480 490 hj0295 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF 400 410 420 430 440 450 500 510 520 530 540 550 hj0295 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV 460 470 480 490 500 510 560 570 580 590 600 610 hj0295 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE 520 530 540 550 560 570 hj0295 ELLAFKVHP ::::::::: gi|608 ELLAFKVHPL 580 >>gi|48146985|emb|CAG33715.1| NR1D2 [Homo sapiens] (579 aa) initn: 3889 init1: 3889 opt: 3889 Z-score: 4104.8 bits: 769.5 E(): 0 Smith-Waterman score: 3889; 99.827% identity (99.827% similar) in 579 aa overlap (41-619:1-579) 20 30 40 50 60 70 hj0295 PGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPASCHSEGSE :::::::::::::::::::::::::::::: gi|481 MEVNAGGVIAYISSSSSASSPASCHSEGSE 10 20 30 80 90 100 110 120 130 hj0295 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|481 NSFQSSSSSVPSSPNSSNSDINGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH 40 50 60 70 80 90 140 150 160 170 180 190 hj0295 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR 100 110 120 130 140 150 200 210 220 230 240 250 hj0295 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND 160 170 180 190 200 210 260 270 280 290 300 310 hj0295 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE 220 230 240 250 260 270 320 330 340 350 360 370 hj0295 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY 280 290 300 310 320 330 380 390 400 410 420 430 hj0295 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP 340 350 360 370 380 390 440 450 460 470 480 490 hj0295 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF 400 410 420 430 440 450 500 510 520 530 540 550 hj0295 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV 460 470 480 490 500 510 560 570 580 590 600 610 hj0295 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE 520 530 540 550 560 570 hj0295 ELLAFKVHP ::::::::: gi|481 ELLAFKVHP >>gi|114585699|ref|XP_516330.2| PREDICTED: nuclear recep (579 aa) initn: 3878 init1: 3878 opt: 3878 Z-score: 4093.2 bits: 767.4 E(): 0 Smith-Waterman score: 3878; 99.482% identity (99.827% similar) in 579 aa overlap (41-619:1-579) 20 30 40 50 60 70 hj0295 PGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPASCHSEGSE :::::::::::::::::::::::::::::: gi|114 MEVNAGGVIAYISSSSSASSPASCHSEGSE 10 20 30 80 90 100 110 120 130 hj0295 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|114 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLSNIEGILKNDRIDCSMKTSKSSAPGMTKSH 40 50 60 70 80 90 140 150 160 170 180 190 hj0295 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR 100 110 120 130 140 150 200 210 220 230 240 250 hj0295 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND 160 170 180 190 200 210 260 270 280 290 300 310 hj0295 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|114 TLVEHHEQTALPAQEQLRPKPQLDQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE 220 230 240 250 260 270 320 330 340 350 360 370 hj0295 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY 280 290 300 310 320 330 380 390 400 410 420 430 hj0295 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|114 PNGHAICIANGHCMNFSNAYTQRVCDRGPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP 340 350 360 370 380 390 440 450 460 470 480 490 hj0295 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF 400 410 420 430 440 450 500 510 520 530 540 550 hj0295 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV 460 470 480 490 500 510 560 570 580 590 600 610 hj0295 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE 520 530 540 550 560 570 hj0295 ELLAFKVHP ::::::::: gi|114 ELLAFKVHP >>gi|28279409|gb|AAH45613.1| Nuclear receptor subfamily (579 aa) initn: 3865 init1: 3865 opt: 3865 Z-score: 4079.4 bits: 764.9 E(): 0 Smith-Waterman score: 3865; 99.482% identity (99.655% similar) in 579 aa overlap (41-619:1-579) 20 30 40 50 60 70 hj0295 PGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPASCHSEGSE :::::::::::::::::::: ::::::::: gi|282 MEVNAGGVIAYISSSSSASSHASCHSEGSE 10 20 30 80 90 100 110 120 130 hj0295 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH 40 50 60 70 80 90 140 150 160 170 180 190 hj0295 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR 100 110 120 130 140 150 200 210 220 230 240 250 hj0295 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND 160 170 180 190 200 210 260 270 280 290 300 310 hj0295 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE 220 230 240 250 260 270 320 330 340 350 360 370 hj0295 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY :::::::::::.::::: :::::::::::::::::::::::::::::::::::::::::: gi|282 QQENSAESMQPKRGERIRKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY 280 290 300 310 320 330 380 390 400 410 420 430 hj0295 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP 340 350 360 370 380 390 440 450 460 470 480 490 hj0295 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF 400 410 420 430 440 450 500 510 520 530 540 550 hj0295 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV 460 470 480 490 500 510 560 570 580 590 600 610 hj0295 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE 520 530 540 550 560 570 hj0295 ELLAFKVHP ::::::::: gi|282 ELLAFKVHP >>gi|471081|gb|AAA65937.1| orphan nuclear hormone recept (579 aa) initn: 3864 init1: 3510 opt: 3863 Z-score: 4077.3 bits: 764.5 E(): 0 Smith-Waterman score: 3863; 99.482% identity (99.655% similar) in 579 aa overlap (42-619:1-579) 20 30 40 50 60 70 hj0295 GRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPASCHSEGSEN :::::::::::::::::::::::::::::: gi|471 EVNAGGVIAYISSSSSASSPASCHSEGSEN 10 20 30 80 90 100 110 120 130 hj0295 SFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 SFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSHS 40 50 60 70 80 90 140 150 160 170 180 190 hj0295 GVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 GVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRM 100 110 120 130 140 150 200 210 220 230 240 250 hj0295 NRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQNDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 NRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQNDT 160 170 180 190 200 210 260 270 280 290 300 310 hj0295 LVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 LVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQEQ 220 230 240 250 260 270 320 330 340 350 360 370 hj0295 QENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 QENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHYP 280 290 300 310 320 330 380 390 400 410 420 430 hj0295 NGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 NGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSPY 340 350 360 370 380 390 440 450 460 470 480 490 hj0295 VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 VDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFA 400 410 420 430 440 450 500 510 520 530 540 550 hj0295 SLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 SLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVL 460 470 480 490 500 510 560 570 580 590 600 610 hj0295 VSADRSGI-ENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE ::::::: .:::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 VSADRSGNRKNVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE 520 530 540 550 560 570 hj0295 ELLAFKVHP ::::::::: gi|471 ELLAFKVHP >>gi|73989968|ref|XP_542763.2| PREDICTED: similar to Orp (576 aa) initn: 3618 init1: 1954 opt: 3783 Z-score: 3992.9 bits: 748.9 E(): 9.1e-214 Smith-Waterman score: 3783; 97.755% identity (99.309% similar) in 579 aa overlap (41-619:1-576) 20 30 40 50 60 70 hj0295 PGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPASCHSEGSE :::::::::::::::::::::::::::::: gi|739 MEVNAGGVIAYISSSSSASSPASCHSEGSE 10 20 30 80 90 100 110 120 130 hj0295 NSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSSAPGMTKSH ::::::::::::::::::::.:::::::::.::::::::::::::::::::::::::::: gi|739 NSFQSSSSSVPSSPNSSNSDNNGNPKNGDLSNIEGILKNDRIDCSMKTSKSSAPGMTKSH 40 50 60 70 80 90 140 150 160 170 180 190 hj0295 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMR 100 110 120 130 140 150 200 210 220 230 240 250 hj0295 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQND 160 170 180 190 200 210 260 270 280 290 300 310 hj0295 TLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHKDTFMYNQE :: :::::::::::::::::::::::::::::: ::::::.::::::::::::::::::: gi|739 TL-EHHEQTALPAQEQLRPKPQLEQENIKSSSP-SSDFAKDEVIGMVTRAHKDTFMYNQE 220 230 240 250 260 320 330 340 350 360 370 hj0295 QQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQFKGRNIMHY :.:::::.::::: :::::.::::::::::::.::::::::::::::::::.:::::::: gi|739 QRENSAETMQPQR-ERIPKSMEQYNLNHDHCGSGLSSHFPCSESQQHLNGQYKGRNIMHY 270 280 290 300 310 320 380 390 400 410 420 430 hj0295 PNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHLVCPMSKSP :::::::::::::::::::::::::::: :::::::::::.::::::::::::::::::: gi|739 PNGHAICIANGHCMNFSNAYTQRVCDRVSIDGFSQNENKNNYLCNTGGRMHLVCPMSKSP 330 340 350 360 370 380 440 450 460 470 480 490 hj0295 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRF 390 400 410 420 430 440 500 510 520 530 540 550 hj0295 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVV 450 460 470 480 490 500 560 570 580 590 600 610 hj0295 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSE 510 520 530 540 550 560 hj0295 ELLAFKVHP ::::::::: gi|739 ELLAFKVHP 570 >>gi|194221546|ref|XP_001492528.2| PREDICTED: similar to (655 aa) initn: 3606 init1: 1960 opt: 3780 Z-score: 3989.0 bits: 748.3 E(): 1.5e-213 Smith-Waterman score: 3780; 95.741% identity (98.467% similar) in 587 aa overlap (33-619:71-655) 10 20 30 40 50 60 hj0295 PATTAASSPGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASSPA : . . ...:. ::::::::::::::::: gi|194 GVAGSSSHKLLLSILALSAICLSEGPLISIPFNFLQTVVNVDQGGVIAYISSSSSASSPA 50 60 70 80 90 100 70 80 90 100 110 120 hj0295 SCHSEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSKSS :::::::::::::::: :::::::::::.:::::::::.::::::::::.:::::::::: gi|194 SCHSEGSENSFQSSSS-VPSSPNSSNSDNNGNPKNGDLSNIEGILKNDRLDCSMKTSKSS 110 120 130 140 150 130 140 150 160 170 180 hj0295 APGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLK ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 APGMTKNHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLK 160 170 180 190 200 210 190 200 210 220 230 240 hj0295 NENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 220 230 240 250 260 270 250 260 270 280 290 300 hj0295 FSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRAHK :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|194 FSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEPENIKSSSPPSSDFAKEEVIGMVTRAHK 280 290 300 310 320 330 310 320 330 340 350 360 hj0295 DTFMYNQEQQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNGQF :::::::::.:::::.::::: ::.:::::::::::::::.::::::::::::::::::. gi|194 DTFMYNQEQRENSAETMQPQR-ERVPKNMEQYNLNHDHCGSGLSSHFPCSESQQHLNGQY 340 350 360 370 380 390 370 380 390 400 410 420 hj0295 KGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRMHL ::::.::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|194 KGRNLMHYPNGHAICIANGHCMNFSNAYTQRVCDRVSIDGFSQNENKNSYLCNTGGRMHL 400 410 420 430 440 450 430 440 450 460 470 480 hj0295 VCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGT 460 470 480 490 500 510 490 500 510 520 530 540 hj0295 FEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEE 520 530 540 550 560 570 550 560 570 580 590 600 hj0295 MSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLR 580 590 600 610 620 630 610 hj0295 SLNNMHSEELLAFKVHP ::::::::::::::::: gi|194 SLNNMHSEELLAFKVHP 640 650 >>gi|62087762|dbj|BAD92328.1| Orphan nuclear receptor NR (549 aa) initn: 2444 init1: 2444 opt: 3689 Z-score: 3894.0 bits: 730.5 E(): 3e-208 Smith-Waterman score: 3689; 99.818% identity (99.818% similar) in 549 aa overlap (72-619:1-549) 50 60 70 80 90 100 hj0295 EVNAGGVIAYISSSSSASSPASCHSEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLA :::::::::::::::::::::::::::::: gi|620 SFQSSSSSVPSSPNSSNSDTNGNPKNGDLA 10 20 30 110 120 130 140 150 160 hj0295 NIEGILKNDRIDCSMKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NIEGILKNDRIDCSMKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACE 40 50 60 70 80 90 170 180 190 200 210 220 hj0295 GCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPK 100 110 120 130 140 150 230 240 250 260 270 280 hj0295 REKQRMLIEMQSAMKTMMNSQFSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 REKQRMLIEMQSAMKTMMNSQFSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSS 160 170 180 190 200 210 290 300 310 320 330 340 hj0295 SPPSSDFAKEEVIGMVTRAHKDTFMYNQEQQENSAESMQPQRGERIPKNMEQYNLNHDHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SPPSSDFAKEEVIGMVTRAHKDTFMYNQEQQENSAESMQPQRGERIPKNMEQYNLNHDHC 220 230 240 250 260 270 350 360 370 380 390 400 hj0295 GNGLSSHFPCSESQQHLNGQFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GNGLSSHFPCSESQQHLNGQFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPID 280 290 300 310 320 330 410 420 430 440 450 460 hj0295 GFSQNENKNSYLCNTGGRMHLV-CPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFA :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|620 GFSQNENKNSYLCNTGGRMHLVVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFA 340 350 360 370 380 390 470 480 490 500 510 520 hj0295 KRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAG 400 410 420 430 440 450 530 540 550 560 570 580 hj0295 DLLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DLLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLI 460 470 480 490 500 510 590 600 610 hj0295 MKNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP ::::::::::::::::::::::::::::::::::::::: gi|620 MKNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP 520 530 540 >>gi|148688702|gb|EDL20649.1| nuclear receptor subfamily (599 aa) initn: 3746 init1: 2097 opt: 3614 Z-score: 3814.4 bits: 715.9 E(): 8.1e-204 Smith-Waterman score: 3624; 87.217% identity (94.337% similar) in 618 aa overlap (2-619:2-599) 10 20 30 40 50 60 hj0295 GGPATTAASSPGRRGAEAAAAAALPPLREAGGPGRLREGTMEVNAGGVIAYISSSSSASS :::...: :::::: :: ..::.::::::::::::::::: gi|148 CGPASATACSPGRRGE-----------------GRTLSSAMELNAGGVIAYISSSSSASS 10 20 30 40 70 80 90 100 110 120 hj0295 PASCHSEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDRIDCSMKTSK :::::::::::::::::::::::::::: :.::::::.:...:.:.::.:: :: .::.: gi|148 PASCHSEGSENSFQSSSSSVPSSPNSSNCDANGNPKNADISSIDGVLKSDRTDCPVKTGK 50 60 70 80 90 100 130 140 150 160 170 180 hj0295 SSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKC .:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TSAPGMTKSHSGMTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKC 110 120 130 140 150 160 190 200 210 220 230 240 hj0295 LKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMN 170 180 190 200 210 220 250 260 270 280 290 300 hj0295 SQFSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKEEVIGMVTRA .:::::::::::.:.:.:.::::::::::: ::::::::.. :: :::::::::::::: gi|148 TQFSGHLQNDTLAEQHDQSALPAQEQLRPKSQLEQENIKNT--PS-DFAKEEVIGMVTRA 230 240 250 260 270 280 310 320 330 340 350 360 hj0295 HKDTFMYNQEQQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPCSESQQHLNG :::::.::::..:::.::: ::::::::.::::::::.:: :.:. .:::::: ::::.: gi|148 HKDTFLYNQEHRENSSESMPPQRGERIPRNMEQYNLNQDHRGSGIHNHFPCSERQQHLSG 290 300 310 320 330 340 370 380 390 400 410 420 hj0295 QFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNSYLCNTGGRM :.:::::::::::::.:::::::::::.:::::::::.:. : ::.::.::::::::::: gi|148 QYKGRNIMHYPNGHAVCIANGHCMNFSSAYTQRVCDRIPVGGCSQTENRNSYLCNTGGRM 350 360 370 380 390 400 430 440 450 460 470 480 hj0295 HLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|148 HLVCPMSKSPYVDPQKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKA 410 420 430 440 450 460 490 500 510 520 530 540 hj0295 GTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSD :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|148 GTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLSSMFEFSEKLNALQLSD 470 480 490 500 510 520 550 560 570 580 590 600 hj0295 EEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPD 530 540 550 560 570 580 610 hj0295 LRSLNNMHSEELLAFKVHP ::::::::::::::::::: gi|148 LRSLNNMHSEELLAFKVHP 590 619 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 15:32:39 2008 done: Tue Aug 12 15:34:48 2008 Total Scan time: 915.330 Total Display time: 0.220 Function used was FASTA [version 34.26.5 April 26, 2007]