# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohj03059.fasta.nr -Q hj03059.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hj03059, 600 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6842206 sequences Expectation_n fit: rho(ln(x))= 4.8109+/-0.000183; mu= 14.1683+/- 0.010 mean_var=69.2215+/-13.421, 0's: 41 Z-trim: 47 B-trim: 0 in 0/67 Lambda= 0.154154 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|119606049|gb|EAW85643.1| intraflagellar transpo (1432) 2831 639.2 2.2e-180 gi|168273040|dbj|BAG10359.1| intraflagellar transp (1462) 2818 636.3 1.7e-179 gi|109127145|ref|XP_001088942.1| PREDICTED: simila (1448) 2734 617.7 6.9e-174 gi|194386720|dbj|BAG61170.1| unnamed protein produ (1149) 2593 586.2 1.6e-164 gi|194386600|dbj|BAG61110.1| unnamed protein produ ( 801) 2441 552.3 1.8e-154 gi|149750895|ref|XP_001497463.1| PREDICTED: simila (1463) 2394 542.0 4e-151 gi|194678514|ref|XP_001789840.1| PREDICTED: simila (1466) 2258 511.8 5.2e-142 gi|74202818|dbj|BAE37490.1| unnamed protein produc (1242) 2242 508.2 5.4e-141 gi|187954153|gb|AAI39006.1| Intraflagellar transpo (1464) 2242 508.2 6.1e-141 gi|184186088|ref|NP_598887.3| intraflagellar trans (1464) 2242 508.2 6.1e-141 gi|148690449|gb|EDL22396.1| mCG17645, isoform CRA_ (1267) 2237 507.1 1.2e-140 gi|148690448|gb|EDL22395.1| mCG17645, isoform CRA_ (1477) 2237 507.1 1.3e-140 gi|82400102|gb|ABB72790.1| intraflagellar transpor (1464) 2232 506.0 2.8e-140 gi|126335468|ref|XP_001364681.1| PREDICTED: simila (1464) 2199 498.7 4.6e-138 gi|73959621|ref|XP_547195.2| PREDICTED: similar to (1012) 1843 419.4 2.4e-114 gi|160774080|gb|AAI55382.1| Unknown (protein for M (1461) 1843 419.5 3.1e-114 gi|156214519|gb|EDO35505.1| predicted protein [Nem (1188) 1317 302.4 4.4e-79 gi|60098865|emb|CAH65263.1| hypothetical protein [ (1412) 1196 275.6 6.3e-71 gi|190580618|gb|EDV20700.1| hypothetical protein T (1452) 1126 260.0 3.1e-66 gi|149409397|ref|XP_001508248.1| PREDICTED: simila ( 340) 920 213.7 6.6e-53 gi|117706|sp|P17302|CXA1_HUMAN Gap junction alpha- ( 382) 920 213.7 7.2e-53 gi|62898139|dbj|BAD97009.1| connexin 43 variant [H ( 382) 920 213.7 7.2e-53 gi|114609118|ref|XP_001164302.1| PREDICTED: hypoth ( 382) 920 213.7 7.2e-53 gi|60654371|gb|AAX29876.1| gap junction protein al ( 383) 920 213.7 7.2e-53 gi|60827373|gb|AAX36796.1| gap junction protein al ( 383) 920 213.7 7.2e-53 gi|75044408|sp|Q6TYA8.1|CXA1_ERIEU Gap junction al ( 382) 915 212.6 1.6e-52 gi|28975325|gb|AAO61858.1| gap junction protein co ( 382) 915 212.6 1.6e-52 gi|39981125|gb|AAR33085.1| connexin 43 [Phodopus s ( 382) 915 212.6 1.6e-52 gi|126310508|ref|XP_001369481.1| PREDICTED: simila ( 382) 915 212.6 1.6e-52 gi|28975323|gb|AAO61857.1| gap junction protein co ( 382) 915 212.6 1.6e-52 gi|166220075|sp|A6XKM2.1|CXA1_URSAM Gap junction a ( 382) 914 212.4 1.8e-52 gi|166214915|sp|Q29101.2|CXA1_PIG Gap junction alp ( 382) 914 212.4 1.8e-52 gi|39981127|gb|AAR33086.1| connexin 43 [Spermophil ( 382) 914 212.4 1.8e-52 gi|75075799|sp|Q4R4S7.1|CXA1_MACFA Gap junction al ( 382) 914 212.4 1.8e-52 gi|109072850|ref|XP_001109566.1| PREDICTED: connex ( 382) 914 212.4 1.8e-52 gi|75044409|sp|Q6TYA9.1|CXA1_CERAE Gap junction al ( 382) 914 212.4 1.8e-52 gi|117707|sp|P23242|CXA1_MOUSE Gap junction alpha- ( 382) 914 212.4 1.8e-52 gi|117708|sp|P08050|CXA1_RAT Gap junction alpha-1 ( 382) 914 212.4 1.8e-52 gi|75044407|sp|Q6TYA7.1|CXA1_RABIT Gap junction al ( 382) 914 212.4 1.8e-52 gi|33286888|gb|AAH55375.1| Gja1 protein [Mus muscu ( 434) 914 212.4 2e-52 gi|567197|gb|AAA53027.1| connexin 43 ( 382) 908 211.1 4.6e-52 gi|149722921|ref|XP_001504247.1| PREDICTED: connex ( 382) 906 210.6 6.2e-52 gi|51557070|gb|AAU06305.1| connexin 43 [Cavia porc ( 382) 905 210.4 7.2e-52 gi|117704|sp|P18246|CXA1_BOVIN Gap junction alpha- ( 383) 903 210.0 9.9e-52 gi|26325242|dbj|BAC26375.1| unnamed protein produc ( 382) 902 209.7 1.2e-51 gi|21264421|sp|P14154|CXA1_CHICK Gap junction alph ( 381) 899 209.1 1.8e-51 gi|112383420|gb|ABI17847.1| connexin 43 [Spermophi ( 382) 898 208.8 2.1e-51 gi|227943|prf||1714172A connexin 43 ( 382) 897 208.6 2.5e-51 gi|62899971|sp|Q6S9C0|CXA1_CANFA Gap junction alph ( 382) 883 205.5 2.2e-50 gi|16024889|gb|AAK81697.1| connexin 43 [Xenopus tr ( 379) 869 202.4 1.9e-49 >>gi|119606049|gb|EAW85643.1| intraflagellar transport 1 (1432 aa) initn: 2831 init1: 2831 opt: 2831 Z-score: 3393.6 bits: 639.2 E(): 2.2e-180 Smith-Waterman score: 2831; 99.763% identity (100.000% similar) in 422 aa overlap (145-566:408-829) 120 130 140 150 160 170 hj0305 NKKEEELKVAQTDGVNVDMHLKQIEIKKFKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .::::::::::::::::::::::::::::: gi|119 AMSSHFHQQVAAMQVSPSLLNVCFLSTGVAHSLRTDMHISGVFATKDAVAVWNGRQVAIF 380 390 400 410 420 430 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL 440 450 460 470 480 490 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL 500 510 520 530 540 550 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV 560 570 580 590 600 610 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLL 620 630 640 650 660 670 420 430 440 450 460 470 hj0305 HESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLED 680 690 700 710 720 730 480 490 500 510 520 530 hj0305 CDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM 740 750 760 770 780 790 540 550 560 570 580 590 hj0305 GHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGGTP :::::::::::::::::::::::::::::::: gi|119 GHARGARALREAEQEPELEARVAVLATQLGMLEDAEQLYRKCKRHDLLNKFYQAAGRWQE 800 810 820 830 840 850 600 hj0305 TGLSLH gi|119 ALQVAEHHDRVHLRSTYHRYAGHLEASADCSRALSYYEKSDTHRFEVPRMLSEDLPSLEL 860 870 880 890 900 910 >>gi|168273040|dbj|BAG10359.1| intraflagellar transport (1462 aa) initn: 2818 init1: 2818 opt: 2818 Z-score: 3377.9 bits: 636.3 E(): 1.7e-179 Smith-Waterman score: 2818; 99.526% identity (99.763% similar) in 422 aa overlap (145-566:438-859) 120 130 140 150 160 170 hj0305 NKKEEELKVAQTDGVNVDMHLKQIEIKKFKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .::::::::::::::::::::::::::::: gi|168 AMSSHFHQQVAAMQVSPSLLNVCFLSTGVAHSLRTDMHISGVFATKDAVAVWNGRQVAIF 410 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|168 DICGNFLVVGTDLALFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLL 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 HESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 HESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLED 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 CDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 CDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM 770 780 790 800 810 820 540 550 560 570 580 590 hj0305 GHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGGTP :::::::::::::::::::::::::::::::: gi|168 GHARGARALREAEQEPELEARVAVLATQLGMLEDAEQLYRKCKRHDLLNKFYQAAGRWQE 830 840 850 860 870 880 600 hj0305 TGLSLH gi|168 ALQVAEHHDRVHLRSTYHRYAGHLEASADCSRALSYYEKSDTHRFEVPRMLSEDLPSLEL 890 900 910 920 930 940 >>gi|109127145|ref|XP_001088942.1| PREDICTED: similar to (1448 aa) initn: 2731 init1: 2731 opt: 2734 Z-score: 3277.0 bits: 617.7 E(): 6.9e-174 Smith-Waterman score: 2734; 86.100% identity (93.568% similar) in 482 aa overlap (87-566:381-859) 60 70 80 90 100 110 hj0305 QSAFRCNTQQPGCENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNK . :: . : .:: . .:. : :. . gi|109 WRKVPGFLGSPGAEGKDRWALQTPTELQGNITQIQWGSRKNLLAVNNVISVAILSEQAMS 360 370 380 390 400 410 120 130 140 150 160 170 hj0305 KEEELKVAQTDGVNVDMHLKQIEIKK--FKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .. . .:: .:.:. : .. . . .::::::::::::::::::::::::::::: gi|109 SHFHQQVA---AVQVSPSLLNVCFLSTGVAHSLRTDMHISGVFATKDAVAVWNGRQVAIF 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL :::::..::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|109 ELSGAVMRSAGTFLCETPVLAMHEESVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :.:::::::::::::::::::::::::::::::.:::::::.:::::::::::::::::: gi|109 DVCGNFLVVGTDLAHFKSFDLSRREAKAHCSCRNLAELVPGAGGIASLRCSSSGSTISIL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV :::::::::::::::::::::::.:::::::::::::::::::::.:::::.:: ::::. gi|109 PSKADNSPDSKICFYDVEMDTVTIFDFKTGQIDRRETLSFNEQETDKSHLFADERLKNYI 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLL :::::::::::::::::::::: ::::::.:::.::::::::::::::::::::::::: gi|109 PVNHFWDQSEPRLFVCEAVQETLGSQPQSADGQPRDGRAGPAADVLILSFFISEEHGFLL 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 HESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLED ::::::::.::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 HESFPRPAASHSLLGMEVPYYYFTRKPEEADREEEVEPGCHHIPQMVSRRPLRDFVGLED 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 CDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 CDKATRDAMLHFSFFITIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM 770 780 790 800 810 820 540 550 560 570 580 590 hj0305 GHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGGTP :::::::::::::.:::::::::::::::::: gi|109 GHARGARALREAEREPELEARVAVLATQLGMLEDAEQLYRKCKRYDLLNRFYQAAGQWQK 830 840 850 860 870 880 600 hj0305 TGLSLH gi|109 ALKVAERHDRVHLRSTYHHYAGHLEASADCSRALSYYEKSDTHRFEVPRMLSEDLPSLEL 890 900 910 920 930 940 >>gi|194386720|dbj|BAG61170.1| unnamed protein product [ (1149 aa) initn: 2588 init1: 2588 opt: 2593 Z-score: 3108.8 bits: 586.2 E(): 1.6e-164 Smith-Waterman score: 2593; 87.445% identity (92.952% similar) in 454 aa overlap (77-528:97-546) 50 60 70 80 90 100 hj0305 TAVESAWGDEQSAFRCNTQQPGCENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFY ..:..:. . :: . : .:: . :. gi|194 LCWHPTRLVLAVGWETGEVTVFNKQDKEQHTMPLTHTAD-ITQIQWGSRKNLLAVNSVIS 70 80 90 100 110 120 110 120 130 140 150 160 hj0305 VMRKEEKLNKKEEELKVAQTDGVNVDMHLKQIEIKK--FKYSLRTDMHISGVFATKDAVA : :. ... . .:: ...:. : .. . . .::::::::::::::::::: gi|194 VAILSERAMSSHFHQQVA---AMQVSPSLLNVCFLSTGVAHSLRTDMHISGVFATKDAVA 130 140 150 160 170 180 170 180 190 200 210 220 hj0305 VWNGRQVAIFELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VWNGRQVAIFELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLF 190 200 210 220 230 240 230 240 250 260 270 280 hj0305 SETEGNPCFLDICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SETEGNPCFLDICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRC 250 260 270 280 290 300 290 300 310 320 330 340 hj0305 SSSGSTISILPSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SSSGSTISILPSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHL 310 320 330 340 350 360 350 360 370 380 390 400 hj0305 FVDEGLKNYVPVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FVDEGLKNYVPVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSF 370 380 390 400 410 420 410 420 430 440 450 460 hj0305 FISEEHGFLLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FISEEHGFLLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRR 430 440 450 460 470 480 470 480 490 500 510 520 hj0305 PLRDFVGLEDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PLRDFVGLEDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRL 490 500 510 520 530 540 530 540 550 560 570 580 hj0305 DVAKVCLGNMGHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQP :::: gi|194 DVAKEDAEQLYRKCKRHDLLNKFYQAAGRWQEALQVAEHHDRVHLRSTYHRYAGHLEASA 550 560 570 580 590 600 >>gi|194386600|dbj|BAG61110.1| unnamed protein product [ (801 aa) initn: 2441 init1: 2441 opt: 2441 Z-score: 2928.2 bits: 552.3 E(): 1.8e-154 Smith-Waterman score: 2441; 99.724% identity (100.000% similar) in 362 aa overlap (145-506:438-799) 120 130 140 150 160 170 hj0305 NKKEEELKVAQTDGVNVDMHLKQIEIKKFKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .::::::::::::::::::::::::::::: gi|194 AMSSHFHQQVAAMQVSPSLLNVCFLSTGVAHSLRTDMHISGVFATKDAVAVWNGRQVAIF 410 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQPQDGRAGPAADVLILSFFISEEHGFLL 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 HESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGLED 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 CDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNM :::::::::::::::::::::::::::::::: gi|194 CDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKRA 770 780 790 800 540 550 560 570 580 590 hj0305 GHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGGTP >>gi|149750895|ref|XP_001497463.1| PREDICTED: similar to (1463 aa) initn: 2380 init1: 1383 opt: 2394 Z-score: 2868.2 bits: 542.0 E(): 4e-151 Smith-Waterman score: 2394; 83.491% identity (94.104% similar) in 424 aa overlap (145-566:438-860) 120 130 140 150 160 170 hj0305 NKKEEELKVAQTDGVNVDMHLKQIEIKKFKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .:::::::.:::::::::::::::.::.:: gi|149 AMSAHLHQQVAVVQISPSLLSVAFLSTGVTHSLRTDMHVSGVFATKDAVAVWNGKQVVIF 410 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL : ::::.:.:::::::.:::::::::::::: :::::::::::::::::::::::::::. gi|149 EPSGAALRNAGTFLCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLLFSETEGNPCFF 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :::::::::::::::::::::::::::.::.:.::::::::.::.:::::...:: :::: gi|149 DICGNFLVVGTDLAHFKSFDLSRREAKVHCNCKSLAELVPGAGGMASLRCNANGSKISIL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV ::::::::::::::::::::::..:::::::::::::::: :::.::: :.:: : : . gi|149 LSKADNSPDSKICFYDVEMDTVTILDFKTGQIDRRETLSFNGQETKKSHAFADERLTNLI 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQ--PQSANGQPQDGRAGPAADVLILSFFISEEHGF ::.::::::::::::::::.:.: .: : . . . .:: ::: :::::::::::::::: gi|149 PVSHFWDQSEPRLFVCEAVREVPGAQLLPTDKKPHAEDG-AGPLADVLILSFFISEEHGF 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 LLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGL ::.::::.: : ..:::.:::.::::::: ::::::.:. : :.:::.:.:::::::::: gi|149 LLQESFPQPPTFQTLLGIEVPHYYFTRKPGEADREDQVDSGYHRIPQLVGRRPLRDFVGL 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 EDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG ::::: ::::.:.::::::.:::::::.:::::::::::::::::::::::::::::::: gi|149 EDCDKPTRDAVLNFSFFVTVGDMDEAFRSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG 770 780 790 800 810 820 540 550 560 570 580 590 hj0305 NMGHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGG .::::::::::::::::::::::::::: ::::: gi|149 HMGHARGARALREAEQEPELEARVAVLAIQLGMLEDAEQLYKNCKRYDLLNKLYQASDQW 830 840 850 860 870 880 600 hj0305 TPTGLSLH gi|149 QKAVEVAELHDRIHLRTTYYNYARHLEASADCSRALTYYEKSDTHCFEVPRMLSEDLHSL 890 900 910 920 930 940 >>gi|194678514|ref|XP_001789840.1| PREDICTED: similar to (1466 aa) initn: 1335 init1: 1335 opt: 2258 Z-score: 2704.8 bits: 511.8 E(): 5.2e-142 Smith-Waterman score: 2258; 70.165% identity (87.860% similar) in 486 aa overlap (87-566:381-863) 60 70 80 90 100 110 hj0305 QSAFRCNTQQPGCENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNK ..:: . : .:: . . :. .:. . gi|194 WRKAPGLPNGRGAEGKDKWTLQAPTELEGNIMQIKWGSRKSLLAVNSISSVLILHEQAMS 360 370 380 390 400 410 120 130 140 150 160 170 hj0305 KEEELKVAQTDGVNVDMHLKQIEIKK--FKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .. . .:: .:.:. : .. . . .:::::::.:::::::::::::::.::.:: gi|194 SHFHQQVA---AVQVSPSLLSVSFLSTGVTHSLRTDMHVSGVFATKDAVAVWNGKQVVIF 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL : :::..::::.::::.:::::::::::::: :::::::::::::::: :::.::::::: gi|194 EPSGATLRSAGSFLCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLPFSESEGNPCFL 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL ::::.::::::::::::::::::::::.::.:.:::::::::::..:::::.::: ::.: gi|194 DICGTFLVVGTDLAHFKSFDLSRREAKVHCGCKSLAELVPGVGGLTSLRCSASGSKISLL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV ::::::::::::::::.:::::..:.::::::.:::::.: :::.::. . :: : . : gi|194 LSKADNSPDSKICFYDVDMDTVTILDLKTGQIDQRETLSINGQETKKSQALEDERLTDLV 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSAN----GQPQDGRAGPAADVLILSFFISEEH ::.::::::::::::::::.:.: . :: :. .. . :.. : :::..::::.:::: gi|194 PVSHFWDQSEPRLFVCEAVREVPGAPPQPADRNALAEASTGHVPPQADVVVLSFFVSEEH 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 GFLLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFV ::::..::::: . ..:::..::.::::::: ::. ::... : . ::: :.:::::::: gi|194 GFLLQDSFPRPPAFQTLLGIQVPHYYFTRKPGEANLEDQLDSGSQCIPQAVGRRPLRDFV 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 GLEDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVC ::::::: :::::..::::.:::::::::.:::::::.:::::::::::::::::::.:: gi|194 GLEDCDKPTRDAMINFSFFLTIGDMDEAFRSIKLIKSQAVWENMARMCVKTQRLDVARVC 770 780 790 800 810 820 540 550 560 570 580 590 hj0305 LGNMGHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEG ::.:::::::::::::..::: :::::.::.::::: gi|194 LGHMGHARGARALREAQREPEPEARVAMLAVQLGMLEDAEQLYRRCGRYDLLNRLLQASG 830 840 850 860 870 880 600 hj0305 GGTPTGLSLH gi|194 QWQRAIEVAERHDRMHLRTTYYNYARHLEASGDCSPALSYYEKSDTHRFEVPRMLVEDLQ 890 900 910 920 930 940 >>gi|74202818|dbj|BAE37490.1| unnamed protein product [M (1242 aa) initn: 2275 init1: 1259 opt: 2242 Z-score: 2686.5 bits: 508.2 E(): 5.4e-141 Smith-Waterman score: 2242; 78.066% identity (92.689% similar) in 424 aa overlap (145-566:438-860) 120 130 140 150 160 170 hj0305 NKKEEELKVAQTDGVNVDMHLKQIEIKKFKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .::.::::::::::::::::::::.::::: gi|742 AMSSHFHQQVAAVQISPSLVNVSFLSTGGTHSLHTDMHISGVFATKDAVAVWNGKQVAIF 410 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL : ::...:.:::::::: :::::::..:::: ::.::::::::::::::::::::.:::: gi|742 EPSGSTLRNAGTFLCETSVLAMHEESIYTVEPNRLQVRTWQGTVKQLLLFSETEGSPCFL 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :.::.:::.::::::::::::::::::.::::..::.::: ::.:.::::...:. :::: gi|742 DVCGTFLVAGTDLAHFKSFDLSRREAKVHCSCKNLAQLVPDVGSITSLRCNANGNKISIL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV ::..::::::: .::::::::.::.: :::: . .:: ::: ::... :.:..: .:. gi|742 LSKVNNSPDSKIYIYDVEMDTVNVFNFTTGQIGQIQTLPFNEPPTNETRSFMDKSLAGYT 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQP--QDGRAGPAADVLILSFFISEEHGF ::::::::::::::::::.::.: .:::... :: ..: .::::::: :::::: gi|742 PVNHFWDQSEPRLFVCEALQEAPGAQPQAVDKQPRVEEGTCHKE-EVLILSFFASEEHGF 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 LLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGL :::.:::::.: .::::::::.::::.:: :::.::.:. : .::::::..::::::::: gi|742 LLHDSFPRPSTYQSLLGMEVPHYYFTKKPGEADKEDRVDSGYYHIPQMVAKRPLRDFVGL 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 EDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG :::::.::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EDCDKSTRDAMLNFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG 770 780 790 800 810 820 540 550 560 570 580 590 hj0305 NMGHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGG :::::::::::::::::::::::::.:: ::::: gi|742 NMGHARGARALREAEQEPELEARVAMLAIQLGMLEEAEQLYKKCKRYDLLNKFYQASDQW 830 840 850 860 870 880 600 hj0305 TPTGLSLH gi|742 QKAVEVAELHDRVHLRTTYYNYAKHLEASADCGQALSYYEKSDTHRFEVPRMLSEDLQSL 890 900 910 920 930 940 >>gi|187954153|gb|AAI39006.1| Intraflagellar transport 1 (1464 aa) initn: 2275 init1: 1259 opt: 2242 Z-score: 2685.6 bits: 508.2 E(): 6.1e-141 Smith-Waterman score: 2242; 78.066% identity (92.689% similar) in 424 aa overlap (145-566:438-860) 120 130 140 150 160 170 hj0305 NKKEEELKVAQTDGVNVDMHLKQIEIKKFKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .::.::::::::::::::::::::.::::: gi|187 AMSSHFHQQVAAVQISPSLVNVSFLSTGGTHSLHTDMHISGVFATKDAVAVWNGKQVAIF 410 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL : ::...:.:::::::: :::::::..:::: ::.::::::::::::::::::::.:::: gi|187 EPSGSTLRNAGTFLCETSVLAMHEESIYTVEPNRLQVRTWQGTVKQLLLFSETEGSPCFL 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :.::.:::.::::::::::::::::::.::::..::.::: ::.:.::::...:. :::: gi|187 DVCGTFLVAGTDLAHFKSFDLSRREAKVHCSCKNLAQLVPDVGSITSLRCNANGNKISIL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV ::..::::::: .::::::::.::.: :::: . .:: ::: ::... :.:..: .:. gi|187 LSKVNNSPDSKIYIYDVEMDTVNVFNFTTGQIGQIQTLPFNEPPTNETRSFMDKSLAGYT 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQP--QDGRAGPAADVLILSFFISEEHGF ::::::::::::::::::.::.: .:::... :: ..: .::::::: :::::: gi|187 PVNHFWDQSEPRLFVCEALQEAPGAQPQAVDKQPRVEEGTCHKE-EVLILSFFASEEHGF 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 LLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGL :::.:::::.: .::::::::.::::.:: :::.::.:. : .::::::..::::::::: gi|187 LLHDSFPRPSTYQSLLGMEVPHYYFTKKPGEADKEDRVDSGYYHIPQMVAKRPLRDFVGL 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 EDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG :::::.::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|187 EDCDKSTRDAMLNFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG 770 780 790 800 810 820 540 550 560 570 580 590 hj0305 NMGHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGG :::::::::::::::::::::::::.:: ::::: gi|187 NMGHARGARALREAEQEPELEARVAMLAIQLGMLEEAEQLYKKCKRYDLLNKFYQASDQW 830 840 850 860 870 880 600 hj0305 TPTGLSLH gi|187 QKAVEVAELHDRVHLRTTYYNYAKHLEASADCGQALSYYEKSDTHRFEVPRMLSEDLQSL 890 900 910 920 930 940 >>gi|184186088|ref|NP_598887.3| intraflagellar transport (1464 aa) initn: 2275 init1: 1259 opt: 2242 Z-score: 2685.6 bits: 508.2 E(): 6.1e-141 Smith-Waterman score: 2242; 78.066% identity (92.689% similar) in 424 aa overlap (145-566:438-860) 120 130 140 150 160 170 hj0305 NKKEEELKVAQTDGVNVDMHLKQIEIKKFKYSLRTDMHISGVFATKDAVAVWNGRQVAIF .::.::::::::::::::::::::.::::: gi|184 AMSSHFHQQVAAVQISPSLVNVSFLSTGGTHSLHTDMHISGVFATKDAVAVWNGKQVAIF 410 420 430 440 450 460 180 190 200 210 220 230 hj0305 ELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGNPCFL : ::...:.:::::::: :::::::..:::: ::.::::::::::::::::::::.:::: gi|184 EPSGSTLRNAGTFLCETSVLAMHEESIYTVEPNRLQVRTWQGTVKQLLLFSETEGSPCFL 470 480 490 500 510 520 240 250 260 270 280 290 hj0305 DICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISIL :.::.:::.::::::::::::::::::.::::..::.::: ::.:.::::...:. :::: gi|184 DVCGTFLVAGTDLAHFKSFDLSRREAKVHCSCKNLAQLVPDVGSITSLRCNANGNKISIL 530 540 550 560 570 580 300 310 320 330 340 350 hj0305 PSKADNSPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYV ::..::::::: .::::::::.::.: :::: . .:: ::: ::... :.:..: .:. gi|184 LSKVNNSPDSKIYIYDVEMDTVNVFNFTTGQIGQIQTLPFNEPPTNETRSFMDKSLAGYT 590 600 610 620 630 640 360 370 380 390 400 410 hj0305 PVNHFWDQSEPRLFVCEAVQETPRSQPQSANGQP--QDGRAGPAADVLILSFFISEEHGF ::::::::::::::::::.::.: .:::... :: ..: .::::::: :::::: gi|184 PVNHFWDQSEPRLFVCEALQEAPGAQPQAVDKQPRVEEGTCHKE-EVLILSFFASEEHGF 650 660 670 680 690 700 420 430 440 450 460 470 hj0305 LLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHHIPQMVSRRPLRDFVGL :::.:::::.: .::::::::.::::.:: :::.::.:. : .::::::..::::::::: gi|184 LLHDSFPRPSTYQSLLGMEVPHYYFTKKPGEADKEDRVDSGYYHIPQMVAKRPLRDFVGL 710 720 730 740 750 760 480 490 500 510 520 530 hj0305 EDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG :::::.::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|184 EDCDKSTRDAMLNFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLG 770 780 790 800 810 820 540 550 560 570 580 590 hj0305 NMGHARGARALREAEQEPELEARVAVLATQLGMLVRGARHGVGGKAPRLPQPRPPGEGGG :::::::::::::::::::::::::.:: ::::: gi|184 NMGHARGARALREAEQEPELEARVAMLAIQLGMLEEAEQLYKKCKRYDLLNKFYQASDQW 830 840 850 860 870 880 600 hj0305 TPTGLSLH gi|184 QKAVEVAELHDRVHLRTTYYNYAKHLEASADCGQALSYYEKSDTHRFEVPRMLSEDLQSL 890 900 910 920 930 940 600 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 15:38:18 2008 done: Tue Aug 12 15:40:30 2008 Total Scan time: 913.340 Total Display time: 0.240 Function used was FASTA [version 34.26.5 April 26, 2007]