hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080812/iprscan-20080812-16102656/chunk_1/iprscan-20080812-16102656.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: hj04180 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00609.10.ls Diacylglycerol kinase accessory domain 311.5 1.4e-90 1 PF00609.10.fs Diacylglycerol kinase accessory domain 309.7 4.8e-90 1 PF00781.14.fs Diacylglycerol kinase catalytic domain (pres 164.0 5.1e-48 1 PF00781.14.ls Diacylglycerol kinase catalytic domain (pres 165.9 9.6e-47 1 PF00788.13.fs Ras association (RalGDS/AF-6) domain 115.2 1.7e-31 3 PF00130.12.ls Phorbol esters/diacylglycerol binding domain 114.6 2.6e-31 3 PF00130.12.fs Phorbol esters/diacylglycerol binding domain 108.8 1.2e-29 3 PF00788.13.ls Ras association (RalGDS/AF-6) domain 93.7 5e-25 2 PF07649.3.fs C1-like domain 31.6 2e-11 2 PF07649.3.ls C1-like domain 34.6 3.3e-07 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00130.12.fs 1/3 80 130 .. 1 55 [] 41.9 6.4e-11 PF00130.12.ls 1/3 80 130 .. 1 55 [] 43.9 5.2e-10 PF00130.12.ls 2/3 141 190 .. 1 55 [] 18.7 0.00015 PF07649.3.fs 2/2 152 180 .. 1 30 [] 22.4 5.8e-08 PF00130.12.fs 3/3 203 256 .. 1 55 [] 50.1 3.3e-13 PF00130.12.ls 3/3 203 256 .. 1 55 [] 52.1 1.8e-12 PF00788.13.fs 1/3 315 363 .. 1 48 [. 25.0 6.3e-06 PF00788.13.fs 2/3 414 513 .. 1 97 [] 85.6 1.4e-22 PF00788.13.ls 2/2 414 513 .. 1 97 [] 87.6 3.5e-23 PF00781.14.ls 1/1 607 734 .. 1 152 [] 165.9 9.6e-47 PF00781.14.fs 1/1 607 734 .. 1 152 [] 164.0 5.1e-48 PF00609.10.fs 1/1 760 912 .. 1 190 [] 309.7 4.8e-90 PF00609.10.ls 1/1 760 912 .. 1 190 [] 311.5 1.4e-90 Alignments of top-scoring domains: PF00130.12.fs: domain 1 of 3, from 80 to 130: score 41.9, E = 6.4e-11 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H F+ t+ +ptfC +C +f+wg ++G+ C++C++ H++C ++ hj04180 80 HSFRKV-TLTKPTFCHLCSDFIWG---LAGFLCDVCNFMSHEKCLKH 122 VppeCgcg<-* V + C hj04180 123 VRIPCTSV 130 PF00130.12.ls: domain 1 of 3, from 80 to 130: score 43.9, E = 5.2e-10 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H F+ t+ +ptfC +C +f+wg ++G+ C++C++ H++C ++ hj04180 80 HSFRKV-TLTKPTFCHLCSDFIWG---LAGFLCDVCNFMSHEKCLKH 122 VppeCgcg<-* V + C hj04180 123 VRIPCTSV 130 PF00130.12.ls: domain 2 of 3, from 141 to 190: score 18.7, E = 0.00015 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H F +r + + +fC++C++ l + ++l+C++C l H +C+++ hj04180 141 HCFGPR-GLHKRKFCAVCRKVL----EAPALHCEVCELHLHPDCVPF 182 VppeCgcg<-* + + C+ hj04180 183 ACSDCRQC 190 PF07649.3.fs: domain 2 of 2, from 152 to 180: score 22.4, E = 5.8e-08 *->ktCdaCglpidgdpfYsCseCdFvlHeeCa<-* k+C +C + ++ p +C C+ lH +C+ hj04180 152 KFCAVCRKVLEA-PALHCEVCELHLHPDCV 180 PF00130.12.fs: domain 3 of 3, from 203 to 256: score 50.1, E = 3.3e-13 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek Hh++++ ++++ ++C++C++ + s ++G++C+wC++ +H C+ hj04180 203 HHWREG-NLPSGARCEVCRKTCGSSDVLAGVRCEWCGVQAHSLCSAA 248 VppeCgcg<-* ++peCg g hj04180 249 LAPECGFG 256 PF00130.12.ls: domain 3 of 3, from 203 to 256: score 52.1, E = 1.8e-12 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek Hh++++ ++++ ++C++C++ + s ++G++C+wC++ +H C+ hj04180 203 HHWREG-NLPSGARCEVCRKTCGSSDVLAGVRCEWCGVQAHSLCSAA 248 VppeCgcg<-* ++peCg g hj04180 249 LAPECGFG 256 PF00788.13.fs: domain 1 of 3, from 315 to 363: score 25.0, E = 6.3e-06 *->dsgvlrVygedgtpgt..yktilvskntTaeeViralLrKfgldadd ++ +l+++++d+++++++++ + vs+ aeeV++a+Lr +++ ++d hj04180 315 GKQTLKIFDGDDAVRRsqFRLVTVSRLAGAEEVLEAALRAHHI-PED 360 ped<-* p++ hj04180 361 PGH 363 PF00788.13.fs: domain 2 of 3, from 414 to 513: score 85.6, E = 1.4e-22 *->dsgvlrVygedgtpgt.yktilvskntTaeeViralLrKfgldaddp +++vl++y++++++g+ y++++v++ +Ta+ V+ ++L +g +a++p hj04180 414 AQEVLKIYPGWLKVGVaYVSVRVTPKSTARSVVLEVLPLLGRQAESP 460 edyvLvEvslvlerggeerrvLpddEkPlqiqlqlkrdaq.....rsrFl e+++LvEv ++++ +r ++++dE+Pl+ +lq r+++ ++ + +rF+ hj04180 461 ESFQLVEV--AMGCRHVQR-TMLMDEQPLLDRLQDIRQMSvrqvsQTRFY 507 Lrrred<-* + + +d hj04180 508 VAESRD 513 PF00788.13.ls: domain 2 of 2, from 414 to 513: score 87.6, E = 3.5e-23 *->dsgvlrVygedgtpgt.yktilvskntTaeeViralLrKfgldaddp +++vl++y++++++g+ y++++v++ +Ta+ V+ ++L +g +a++p hj04180 414 AQEVLKIYPGWLKVGVaYVSVRVTPKSTARSVVLEVLPLLGRQAESP 460 edyvLvEvslvlerggeerrvLpddEkPlqiqlqlkrdaq.....rsrFl e+++LvEv ++++ +r ++++dE+Pl+ +lq r+++ ++ + +rF+ hj04180 461 ESFQLVEV--AMGCRHVQR-TMLMDEQPLLDRLQDIRQMSvrqvsQTRFY 507 Lrrred<-* + + +d hj04180 508 VAESRD 513 PF00781.14.ls: domain 1 of 1, from 607 to 734: score 165.9, E = 9.6e-47 *->kllvivNPksGggkgkkelayerkvleklrkalneaqvfeteeqtgg +llv+vNPksGg kg+ ++l +rk+ln++qvf++++ gg hj04180 607 PLLVFVNPKSGGLKGR-------DLLCSFRKLLNPHQVFDLTN--GG 644 pahalelaralgdfkydvDlvvvaGGDGTvneVvngLagrddrakaiRif p +l+l+ ++++f +v+v+GGDGTv++V+++L ++ +r+++ hj04180 645 PLPGLHLFSQVPCF-----RVLVCGGDGTVGWVLGALEETRYRLAC---- 685 prpplGiiPlGTgNdfAraLgipldpegAkaalaallailgqilcradvv p+p ++i+PlGTgNd+ r+L+++ ++ g ++ ++l + +ad v hj04180 686 PEPSVAILPLGTGNDLGRVLRWGAGYSG-----EDPFSVLLSVD-EADAV 729 vldrw<-* +drw hj04180 730 LMDRW 734 PF00781.14.fs: domain 1 of 1, from 607 to 734: score 164.0, E = 5.1e-48 *->kllvivNPksGggkgkkelayerkvleklrkalneaqvfeteeqtgg +llv+vNPksGg kg+ ++l +rk+ln++qvf++++ gg hj04180 607 PLLVFVNPKSGGLKGR-------DLLCSFRKLLNPHQVFDLTN--GG 644 pahalelaralgdfkydvDlvvvaGGDGTvneVvngLagrddrakaiRif p +l+l+ ++++f +v+v+GGDGTv++V+++L ++ +r+++ hj04180 645 PLPGLHLFSQVPCF-----RVLVCGGDGTVGWVLGALEETRYRLAC---- 685 prpplGiiPlGTgNdfAraLgipldpegAkaalaallailgqilcradvv p+p ++i+PlGTgNd+ r+L+++ ++ g ++ ++l + +ad v hj04180 686 PEPSVAILPLGTGNDLGRVLRWGAGYSG-----EDPFSVLLSVD-EADAV 729 vldrw<-* +drw hj04180 730 LMDRW 734 PF00609.10.fs: domain 1 of 1, from 760 to 912: score 309.7, E = 4.8e-90 *->iINNYFSiGVDAsialrFHimREknPekFnSRmkNKlwYfefGtset +++NY++iG+DA+++l+FH++RE++P+kF+SR++NK++Y+++G++++ hj04180 760 QMSNYCGIGIDAELSLDFHQAREEEPGKFTSRLHNKGVYVRVGLQKI 806 lastcknLhesvelecdGqevdLsnrDaslEGIiiLNIPSygGGsnLWGe s++++Lh++++l++++qev+L+ s+EG+i++NIPS+g+G++LWG+ hj04180 807 --SHSRSLHKQIRLQVERQEVELP----SIEGLIFINIPSWGSGADLWGS 850 skksrgrirefkksitdpkdlktavqdidDgLlEVVGlegamhmgqiyts ++d++++++++dDgLlEVVG++g++ mgq+ hj04180 851 -----------------DSDTRFEKPRMDDGLLEVVGVTGVVYMGQV--- 880 iqlglasWvkLmkGrRlaQCsevRlkDiiktektlPMQVDGEP<-* q+gl+s G+R+aQ+s++R+ +++ k++P+QVDGEP hj04180 881 -QGGLRS------GIRIAQGSYFRV--TLL--KATPVQVDGEP 912 PF00609.10.ls: domain 1 of 1, from 760 to 912: score 311.5, E = 1.4e-90 *->iINNYFSiGVDAsialrFHimREknPekFnSRmkNKlwYfefGtset +++NY++iG+DA+++l+FH++RE++P+kF+SR++NK++Y+++G++++ hj04180 760 QMSNYCGIGIDAELSLDFHQAREEEPGKFTSRLHNKGVYVRVGLQKI 806 lastcknLhesvelecdGqevdLsnrDaslEGIiiLNIPSygGGsnLWGe s++++Lh++++l++++qev+L+ s+EG+i++NIPS+g+G++LWG+ hj04180 807 --SHSRSLHKQIRLQVERQEVELP----SIEGLIFINIPSWGSGADLWGS 850 skksrgrirefkksitdpkdlktavqdidDgLlEVVGlegamhmgqiyts ++d++++++++dDgLlEVVG++g++ mgq+ hj04180 851 -----------------DSDTRFEKPRMDDGLLEVVGVTGVVYMGQV--- 880 iqlglasWvkLmkGrRlaQCsevRlkDiiktektlPMQVDGEP<-* q+gl+s G+R+aQ+s++R+ +++ k++P+QVDGEP hj04180 881 -QGGLRS------GIRIAQGSYFRV--TLL--KATPVQVDGEP 912 //