hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-16222554/chunk_1/iprscan-20080812-16222554.nocrc
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Query sequence: hj04451
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00620.17.fs RhoGAP domain                                  208.7    2.8e-61   1
PF00620.17.ls RhoGAP domain                                  210.6    3.3e-60   1
PF00130.12.fs Phorbol esters/diacylglycerol binding domain    37.0    1.5e-09   1
PF00130.12.ls Phorbol esters/diacylglycerol binding domain    38.9    1.6e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00130.12.fs   1/1     604   651 ..     1    55 []    37.0  1.5e-09
PF00130.12.ls   1/1     604   651 ..     1    55 []    38.9  1.6e-08
PF00620.17.fs   1/1     676   851 ..     1   155 []   208.7  2.8e-61
PF00620.17.ls   1/1     676   851 ..     1   155 []   210.6  3.3e-60

Alignments of top-scoring domains:
PF00130.12.fs: domain 1 of 1, from 604 to 651: score 37.0, E = 1.5e-09
                   *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek
                      H+F+     ++pt+C  C+ ++     +qG+ C++C l++H +C e+
     hj04451   604    HKFRKL---RSPTKCRDCEGIV----VFQGVECEECLLVCHRKCLEN 643  

                   VppeCgcg<-*
                   +++ Cg++   
     hj04451   644 LVIICGHQ    651  

PF00130.12.ls: domain 1 of 1, from 604 to 651: score 38.9, E = 1.6e-08
                   *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek
                      H+F+     ++pt+C  C+ ++     +qG+ C++C l++H +C e+
     hj04451   604    HKFRKL---RSPTKCRDCEGIV----VFQGVECEECLLVCHRKCLEN 643  

                   VppeCgcg<-*
                   +++ Cg++   
     hj04451   644 LVIICGHQ    651  

PF00620.17.fs: domain 1 of 1, from 676 to 851: score 208.7, E = 2.8e-61
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      P+i+  C +++e+r+L+ +GIyRv+G+k + ++L++a+++g++ +  
     hj04451   676    PFILKICASEIENRALCLQGIYRVCGNKIKTEKLCQALENGMHLV-- 720  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefi.ea.aaksedeeer.
                   d +e++ h+++++LKl+LR+LPeP + f+ly+efi++a+ +++ +ee+ +
     hj04451   721 DISEFSSHDICDVLKLYLRQLPEPFILFRLYKEFIdLAkEIQHVNEEQEt 770  

                   ....................lealrellrkLPpaNrdtLryLlahLnrVa
                   ++++ ++++ ++   + ++ l + ++llr+LP  N++ L +L+ hL+rV 
     hj04451   771 kknsledkkwpnmcieinriLLKSKDLLRQLPASNFNSLHFLIVHLKRVV 820  

                   qnsevNkMtahNLAivFgPtLlrppdgdsad<-*
                   +++e+NkM+++NL+++FgP+L+rp++++ ++   
     hj04451   821 DHAEENKMNSKNLGVIFGPSLIRPRPTTAPI    851  

PF00620.17.ls: domain 1 of 1, from 676 to 851: score 210.6, E = 3.3e-60
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      P+i+  C +++e+r+L+ +GIyRv+G+k + ++L++a+++g++ +  
     hj04451   676    PFILKICASEIENRALCLQGIYRVCGNKIKTEKLCQALENGMHLV-- 720  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefi.ea.aaksedeeer.
                   d +e++ h+++++LKl+LR+LPeP + f+ly+efi++a+ +++ +ee+ +
     hj04451   721 DISEFSSHDICDVLKLYLRQLPEPFILFRLYKEFIdLAkEIQHVNEEQEt 770  

                   ....................lealrellrkLPpaNrdtLryLlahLnrVa
                   ++++ ++++ ++   + ++ l + ++llr+LP  N++ L +L+ hL+rV 
     hj04451   771 kknsledkkwpnmcieinriLLKSKDLLRQLPASNFNSLHFLIVHLKRVV 820  

                   qnsevNkMtahNLAivFgPtLlrppdgdsad<-*
                   +++e+NkM+++NL+++FgP+L+rp++++ ++   
     hj04451   821 DHAEENKMNSKNLGVIFGPSLIRPRPTTAPI    851  

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