hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-16222554/chunk_1/iprscan-20080812-16222554.nocrc
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Query sequence: hj04451
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00324                                                 249.9    2.1e-70   1
SM00109                                                  36.4    3.8e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00109    1/1     602   648 ..     1    61 []    36.4  3.8e-06
SM00324    1/1     673   874 ..     1   193 []   249.9  2.1e-70

Alignments of top-scoring domains:
SM00109: domain 1 of 1, from 602 to 648: score 36.4, E = 3.8e-06
                   *->Hkfvfrtf.kptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkkC
                       +++fr+ ++pt+C+ C+  + +         g++C+eC ++cH kC
     hj04451   602    LTHKFRKLrSPTKCRDCEGIVVFQ--------GVECEECLLVCHRKC 640  

                   aekvpaqshksglsC<-*
                   +e++          C   
     hj04451   641 LENLVI-------IC    648  

SM00324: domain 1 of 1, from 673 to 874: score 249.9, E = 2.1e-70
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      + iP i+  C +++e+r+l+ +GIYRv+G+k ++++L++a+++g++ 
     hj04451   673    DGIPFILKICASEIENRALCLQGIYRVCGNKIKTEKLCQALENGMHl 719  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                   +             d +e++ hd++++LKlyLR+LPeP + f+ly+efi+
     hj04451   720 V-------------DISEFSSHDICDVLKLYLRQLPEPFILFRLYKEFID 756  

                   aaklyq.i.e.a.t..sr.k.q.s.eksedeeerlralrellslLPpanr
                   +ak+ q+++e+++t++++ +++++++++ +    l + ++ll++LP +n+
     hj04451   757 LAKEIQhVnEeQeTkkNSlEdKkWpNMCIEINRILLKSKDLLRQLPASNF 806  

                   atLryLl.HLnrVaehsevNkMtarNLAivFgPtLlrpp..........l
                   + L++L+ HL+rV +h+e+NkM+++NL+++FgP+L+rp++++ + + ++l
     hj04451   807 NSLHFLIvHLKRVVDHAEENKMNSKNLGVIFGPSLIRPRpttapitissL 856  

                   tdikhqnkvvetlienad<-*
                   +++++q+++ve+li+++    
     hj04451   857 AEYSNQARLVEFLITYSQ    874  

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