hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-16590150/chunk_1/iprscan-20080812-16590150.nocrc
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Query sequence: hj05106
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 672.6   1.1e-197   1
SM00423                                                  59.9    3.3e-13   1
SM00409                                                  27.6     0.0017   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1      80   521 ..     1   532 []   672.6 1.1e-197
SM00423    1/1     539   591 ..     1    56 []    59.9  3.3e-13
SM00409    1/1     603   688 ..     1    58 []    27.6   0.0017

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 80 to 521: score 672.6, E = 1.1e-197
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      +++ll+ded++  r+yVG++++i+sL+++n+s ++         wp+
     hj05106    80    YRILLMDEDQD--RIYVGSKDHILSLNINNISQEA-----LSVFWPA 119  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                   +++      k+eeC+++gk    +++  C N++rv++  n+    thLyv
     hj05106   120 STI------KVEECKMAGK----DPTHGCGNFVRVIQTFNR----THLYV 155  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CG++af+P  +C+++n+g+++       edq+++ ++      + esg+g
     hj05106   156 CGSGAFSP--VCTYLNRGRRS-------EDQVFMIDS------KCESGKG 190  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   +C + P+++++sv++++      eL+sg ++df+g       +d++ifRs
     hj05106   191 RCSFNPNVNTVSVMINE------ELFSGMYIDFMG-------TDAAIFRS 227  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipes.g.dgdfV
                   l          ++  rt++++skw   l ep FV a++ip+++++++ +V
     hj05106   228 LT--------KRNAVRTDQHNSKW---LSEPMFVDAHVIPDGtDpNDAKV 266  

                   YFFFrEtaveainrdcssekavvsRVARvCknDvGGqrlLqkkWtSFLKa
                   YFFF E  ++ ++   +  k+++s +AR+C nD GG r+L++kWt+FLKa
     hj05106   267 YFFFKEKLTDNNR--ST--KQIHSMIARICPNDTGGLRSLVNKWTTFLKA 312  

                   rLnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYgVFsqg
                   rL+Csv++ +g + ++F+eL +vfll +    ++++   ++++Yg+F+  
     hj05106   313 RLVCSVTDEDGPE-THFDELEDVFLLET----DNPR---TTLVYGIFT-- 352  

                   qqtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpvegn
                     tss    ++++gSAVC+++l+dI++vFn Gpf+++egpn++  +++g 
     hj05106   353 --TSS----SVFKGSAVCVYHLSDIQTVFN-GPFAHKEGPNHQLISYQG- 394  

                   kvPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpPltg
                   ++PyprPGtC+++ f++  n++++k +Pddv++fi++hpLm+++++P++ 
     hj05106   395 RIPYPRPGTCPGGAFTP--NMRTTKEFPDDVVTFIRNHPLMYNSIYPIHK 442  

                   rPllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvvvsr
                   rPl v++gtdy++T+iaVdrv+++dG+   y+VlFlGT++G+v Kvvv +
     hj05106   443 RPLIVRIGTDYKYTKIAVDRVNAADGR---YHVLFLGTDRGTVQKVVVLP 489  

                   sssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   +++      + +++leel+vf+++ +pi +m++sskk   
     hj05106   490 TNN----SVSGELILEELEVFKNH-APITTMKISSKK    521  

SM00423: domain 1 of 1, from 539 to 591: score 59.9, E = 3.3e-13
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrgerCderrgsrqnw
                      rC+ yg t C++C+lardpy C+W+  ++ C+r   +++rr++rq++
     hj05106   539    RCHIYG-TACADCCLARDPY-CAWD--GHSCSRFYPTGKRRSRRQDV 581  

                   ssg.pssqCp<-*
                   ++g+p +qC    
     hj05106   582 RHGnPLTQCR    591  

SM00409: domain 1 of 1, from 603 to 688: score 27.6, E = 0.0017
                   *->pp.vtvkeGesvtLtC.as....titWy...................
                         ++++   +  L+C  +++  +i+W+ ++++++++  + + +   
     hj05106   603    EIvQYGVKNNTTFLECaPKspqaSIKWLlqkdkdrrkevklneriia 649  

                   ....LtI.nvtpeDsesgGtYtCaat...sgsasseqgttLtVl<-*
                   ++++L I++v+ +D+   G Y C at ++ +++ +   ++ +Vl   
     hj05106   650 tsqgLLIrSVQGSDQ---GLYHCIATensFKQTIA--KINFKVL    688  

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