hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-17285137/chunk_1/iprscan-20080812-17285137.nocrc
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Query sequence: hj05636
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00588 ogg: 8-oxoguanine DNA-glycosylase (ogg)        807.6   2.2e-240   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00588   1/1      41   364 .]     1   379 []   807.6 2.2e-240

Alignments of top-scoring domains:
TIGR00588: domain 1 of 1, from 41 to 364: score 807.6, E = 2.2e-240
                   *->mlfrslLpssMshrTLaSsPALwaslpiPrSeLrLdlvlrSGQSfrW
                      m++r+lLp++M+hrTLaS+PALwas+p+PrSeLrLdlvl+SGQSfrW
     hj05636    41    MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRW 87   

                   rWeespahfsgllviadqekYsVwvltqtEenqllrvvyrgDkgQvsRPt
                   r e+spah+sg  v+adq    Vw+ltqtEe ql+++vyrgDk+Q+sRPt
     hj05636    88 R-EQSPAHWSG--VLADQ----VWTLTQTEE-QLHCTVYRGDKSQASRPT 129  

                   qdeLetklekyFqLdvsLeqLYthvWisvDkhfqkvaqkfqGvRLLrqkD
                   +deLe+ ++kyFqLdv+L+qLY+h W+svD+hfq+vaqkfqGvRLLrq D
     hj05636   130 PDELEA-VRKYFQLDVTLAQLYHH-WGSVDSHFQEVAQKFQGVRLLRQ-D 176  

                   PfECLiSfIcSSNnniaRiTrmverLCqaFGprlitldgvTYHgFPslha
                   P+ECL+SfIcSSNnniaRiT+mverLCqaFGprli+ld+vTYHgFPsl+a
     hj05636   177 PIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQA 226  

                   LtGvAEGsLEDLpeaEanLPsDFsFnhLRkLGlGYRArYiretARalleE
                   L+G         pe+Ea         hLRkLGlGYRArY++++ARa+leE
     hj05636   227 LAG---------PEVEA---------HLRKLGLGYRARYVSASARAILEE 258  

                   qggrnitsDtawLQqiCkdadYedareaLleLpGVGpKVADCIcLmgLdk
                   qgg+      awLQq+ ++++Ye+a++aL++LpGVG+KVADCIcLm+Ldk
     hj05636   259 QGGL------AWLQQL-RESSYEEAHKALCILPGVGTKVADCICLMALDK 301  

                   pqavPVDVHvrrIakrdYqwsanknhpktsrtkYgpvplarKkinLELgn
                   pqavPVDVH+++Ia+rdY+w     hp+ts++k gp+p+++K    ELgn
     hj05636   302 PQAVPVDVHMWHIAQRDYSW-----HPTTSQAK-GPSPQTNK----ELGN 341  

                   iRLmlFrklwGeyAGwaQavLFskeirstsGs<-*
                       +Fr+lwG+yAGwaQav      r++      
     hj05636   342 ----FFRSLWGPYAGWAQAV---SVPRCPP--    364  

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