# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohj06729.fasta.nr -Q hj06729.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hj06729, 1537 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6806904 sequences Expectation_n fit: rho(ln(x))= 7.7581+/-0.000236; mu= 5.0904+/- 0.013 mean_var=249.0786+/-48.223, 0's: 49 Z-trim: 179 B-trim: 440 in 1/64 Lambda= 0.081265 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|68533123|dbj|BAE06116.1| C6orf21 variant protei (1537) 10962 1299.9 0 gi|168275632|dbj|BAG10536.1| large proline-rich pr (1533) 10942 1297.6 0 gi|114606411|ref|XP_001155374.1| PREDICTED: HLA-B (1533) 10856 1287.5 0 gi|119915484|ref|XP_001250581.1| PREDICTED: simila (1537) 10232 1214.3 0 gi|168985803|emb|CAQ06959.1| HLA-B associated tran (2157) 6054 724.7 1.6e-205 gi|114606399|ref|XP_001155868.1| PREDICTED: simila (2031) 6050 724.2 2.1e-205 gi|56206352|emb|CAI18500.1| HLA-B associated trans (2157) 6045 723.6 3.3e-205 gi|4337110|gb|AAD18086.1| BAT2 [Homo sapiens] (2157) 6045 723.6 3.3e-205 gi|73920186|sp|P48634|BAT2_HUMAN Large proline-ric (2157) 6045 723.6 3.3e-205 gi|168984722|emb|CAQ06970.1| HLA-B associated tran (2157) 6038 722.8 5.8e-205 gi|55961720|emb|CAI18313.1| HLA-B associated trans (2157) 6038 722.8 5.8e-205 gi|38173707|gb|AAH60668.1| HLA-B associated transc (2157) 6034 722.3 8.1e-205 gi|116283913|gb|AAH42295.1| BAT2 protein [Homo sap (2157) 6033 722.2 8.8e-205 gi|114606413|ref|XP_001154964.1| PREDICTED: simila (1776) 6009 719.3 5.4e-204 gi|114606409|ref|XP_001155434.1| PREDICTED: simila (1997) 6009 719.4 5.9e-204 gi|114606407|ref|XP_001155495.1| PREDICTED: simila (2054) 6009 719.4 6e-204 gi|114606405|ref|XP_001155560.1| PREDICTED: simila (2081) 6009 719.4 6e-204 gi|114606401|ref|XP_001155621.1| PREDICTED: simila (2086) 6009 719.4 6e-204 gi|114606403|ref|XP_001155692.1| PREDICTED: simila (2121) 6009 719.4 6.1e-204 gi|114606395|ref|XP_001155808.1| PREDICTED: simila (2142) 6009 719.4 6.1e-204 gi|114606389|ref|XP_001156097.1| PREDICTED: simila (2157) 6009 719.4 6.2e-204 gi|114606397|ref|XP_001155751.1| PREDICTED: simila (2163) 6009 719.4 6.2e-204 gi|73619521|sp|Q5TM26|BAT2_MACMU Large proline-ric (2160) 5938 711.1 2e-201 gi|631089|pir||S36152 MHC class III histocompatibi (1872) 5850 700.7 2.3e-198 gi|119915478|ref|XP_001250447.1| PREDICTED: simila (2166) 5799 694.8 1.6e-196 gi|194223331|ref|XP_001917702.1| PREDICTED: simila (2159) 5798 694.7 1.7e-196 gi|158537754|gb|ABW73319.1| HLA-B associated trans (2166) 5796 694.4 2e-196 gi|147832430|emb|CAN59682.1| HLA-B associated tran (2166) 5791 693.9 3.1e-196 gi|29375|emb|CAA78744.1| Bat2 [Homo sapiens] (1870) 5737 687.5 2.2e-194 gi|119623853|gb|EAX03448.1| HLA-B associated trans (2102) 5689 681.9 1.2e-192 gi|119623855|gb|EAX03450.1| HLA-B associated trans (2108) 5689 681.9 1.2e-192 gi|73619525|sp|Q6MG48|BAT2_RAT Large proline-rich (2161) 5648 677.1 3.4e-191 gi|3941737|gb|AAC82480.1| BAT2 [Mus musculus] (2157) 5628 674.7 1.7e-190 gi|73619523|sp|Q7TSC1|BAT2_MOUSE Large proline-ric (2158) 5628 674.7 1.7e-190 gi|194386260|dbj|BAG59694.1| unnamed protein produ (1382) 5048 606.5 3.8e-170 gi|119623856|gb|EAX03451.1| HLA-B associated trans (1823) 5049 606.8 4.2e-170 gi|51476222|emb|CAH18101.1| hypothetical protein [ (1287) 5046 606.2 4.3e-170 gi|114606417|ref|XP_001155929.1| PREDICTED: simila (1863) 5014 602.7 7.3e-169 gi|114606415|ref|XP_527343.2| PREDICTED: similar t (2016) 5014 602.7 7.7e-169 gi|114606393|ref|XP_001156045.1| PREDICTED: simila (2145) 5014 602.8 8e-169 gi|179339|gb|AAA35585.1| HLA-B-associated transcri (2142) 4931 593.0 6.8e-166 gi|67971542|dbj|BAE02113.1| unnamed protein produc ( 924) 4917 590.9 1.3e-165 gi|20987191|gb|AAH30127.1| Similar to HLA-B associ ( 696) 4914 590.4 1.3e-165 gi|119915482|ref|XP_001250541.1| PREDICTED: simila (2154) 4599 554.1 3.6e-154 gi|13879374|gb|AAH06664.1| Bat2 protein [Mus muscu ( 950) 4463 537.7 1.3e-149 gi|149028088|gb|EDL83539.1| HLA-B associated trans (2014) 4458 537.5 3.2e-149 gi|194391312|dbj|BAG60774.1| unnamed protein produ ( 619) 4373 526.9 1.5e-146 gi|73972192|ref|XP_538834.2| PREDICTED: similar to (2175) 3914 473.8 5.4e-130 gi|73972196|ref|XP_849404.1| PREDICTED: similar to (2182) 3914 473.8 5.4e-130 gi|148694692|gb|EDL26639.1| HLA-B associated trans ( 624) 3888 470.1 2e-129 >>gi|68533123|dbj|BAE06116.1| C6orf21 variant protein [H (1537 aa) initn: 10962 init1: 10962 opt: 10962 Z-score: 6956.5 bits: 1299.9 E(): 0 Smith-Waterman score: 10962; 100.000% identity (100.000% similar) in 1537 aa overlap (1-1537:1-1537) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 60 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT 70 80 90 100 110 120 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 130 140 150 160 170 180 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 190 200 210 220 230 240 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 250 260 270 280 290 300 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 310 320 330 340 350 360 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 370 380 390 400 410 420 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 430 440 450 460 470 480 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 490 500 510 520 530 540 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 550 560 570 580 590 600 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 610 620 630 640 650 660 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 670 680 690 700 710 720 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 730 740 750 760 770 780 790 800 810 820 830 840 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSS 790 800 810 820 830 840 850 860 870 880 890 900 hj0672 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSPRPPTRYEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSPRPPTRYEP 850 860 870 880 890 900 910 920 930 940 950 960 hj0672 QRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 QRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPH 910 920 930 940 950 960 970 980 990 1000 1010 1020 hj0672 SSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 SSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFED 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 hj0672 VAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 VAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEG 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 hj0672 PPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 PPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPV 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 hj0672 QFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 QFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGH 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 hj0672 CVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 CVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLY 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 hj0672 LPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 LPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPD 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 hj0672 TSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 TSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAP 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 hj0672 PPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 PPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQD 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 hj0672 YQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 YQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRW 1450 1460 1470 1480 1490 1500 1510 1520 1530 hj0672 IPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR ::::::::::::::::::::::::::::::::::::: gi|685 IPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR 1510 1520 1530 >>gi|168275632|dbj|BAG10536.1| large proline-rich protei (1533 aa) initn: 10942 init1: 10942 opt: 10942 Z-score: 6943.8 bits: 1297.6 E(): 0 Smith-Waterman score: 10942; 100.000% identity (100.000% similar) in 1533 aa overlap (5-1537:1-1533) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 840 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSS 780 790 800 810 820 830 850 860 870 880 890 900 hj0672 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSPRPPTRYEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSPRPPTRYEP 840 850 860 870 880 890 910 920 930 940 950 960 hj0672 QRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPH 900 910 920 930 940 950 970 980 990 1000 1010 1020 hj0672 SSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFED 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 hj0672 VAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 VAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 hj0672 PPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPV 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 hj0672 QFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGH 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 hj0672 CVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 CVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLY 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 hj0672 LPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPD 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 hj0672 TSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAP 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 hj0672 PPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQD 1380 1390 1400 1410 1420 1430 1450 1460 1470 1480 1490 1500 hj0672 YQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 YQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRW 1440 1450 1460 1470 1480 1490 1510 1520 1530 hj0672 IPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR ::::::::::::::::::::::::::::::::::::: gi|168 IPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR 1500 1510 1520 1530 >>gi|114606411|ref|XP_001155374.1| PREDICTED: HLA-B asso (1533 aa) initn: 10856 init1: 10856 opt: 10856 Z-score: 6889.3 bits: 1287.5 E(): 0 Smith-Waterman score: 10856; 99.217% identity (99.739% similar) in 1533 aa overlap (5-1537:1-1533) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|114 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PASNQLKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|114 GDQDKAAKERESAEQSSGPGPSLRPQNSATWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH ::.::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|114 GHKDSQSASGEERPPEADGKKSNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 840 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSS :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|114 LRERGTPPVDPKLAWVGDVFTATPADPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSS 780 790 800 810 820 830 850 860 870 880 890 900 hj0672 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSPRPPTRYEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSPRPPTRYEP 840 850 860 870 880 890 910 920 930 940 950 960 hj0672 QRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPH 900 910 920 930 940 950 970 980 990 1000 1010 1020 hj0672 SSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFED 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 hj0672 VAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEG 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 hj0672 PPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPV ::::::::::::::.::::::::.:::::::::::::::::::::::::::::::::::: gi|114 PPGSEPPRRPPPAPNDGDRKELPQEQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPV 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 hj0672 QFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|114 QFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLGSGH 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 hj0672 CVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLY : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 CGPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLY 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 hj0672 LPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPD ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|114 LPPGPAPPSALLSGVALKGQFLDFSTLQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPD 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 hj0672 TSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAP 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 hj0672 PPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQD 1380 1390 1400 1410 1420 1430 1450 1460 1470 1480 1490 1500 hj0672 YQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRW ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|114 YQKLSSNLGGPGSSRTPPAGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRW 1440 1450 1460 1470 1480 1490 1510 1520 1530 hj0672 IPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR ::::::::::::::::::::::::::::::::::::: gi|114 IPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR 1500 1510 1520 1530 >>gi|119915484|ref|XP_001250581.1| PREDICTED: similar to (1537 aa) initn: 9094 init1: 6147 opt: 10232 Z-score: 6493.9 bits: 1214.3 E(): 0 Smith-Waterman score: 10232; 92.973% identity (96.617% similar) in 1537 aa overlap (5-1537:1-1537) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT :::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|119 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQQPESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA ::::: ::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|119 PASNQSKRPPAAPENTPSVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|119 GDQDKAAKERESAEQLSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|119 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGPE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH ::..::::.::::::::::::::::.:::: :::::::::::::::::::::::: :::: gi|119 GHKESQSAGGEERPPEADGKKGNSPGSEPPPPKTAWAETSRPPETEPGPPAPKPPPPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::.: .::::::::::::.:::::: gi|119 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPATPPAPAPPPAVPKELPTPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK : .::::::::: :: ::::::::::: ::: ::::::..:::::::::: ::::.::: gi|119 APVPTPEKEPEESAQPSPAQSTPTPGVALAPTAVSGGGSANSTSSGSFEASAVEPQVPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::: :.:::.::.::::::.::::::::::::::::::::::::::::::::: gi|119 EGPEPPEEVPSPATPPAPKAEPKGDGVGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::.:::::::::. :::::::::::::.::::::::::::::::::::::::::::: gi|119 KQQQQQQWQQHQQGSSQPTPVPPSPPQPVTMGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: . gi|119 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFERHAPPL 720 730 740 750 760 770 790 800 810 820 830 840 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSS ::.::::::::::::::::::.:::.:::::::::::::::.:::::::::::::::::: gi|119 LRDRGTPPVDPKLAWVGDVFTTTPADPRPLTSPLRQAADEDEKGMRSETPPVPPPPPSSS 780 790 800 810 820 830 850 860 870 880 890 900 hj0672 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSPRPPTRYEP :::::::::::::::::::::::::::::..:: :::: :::::::::::::::::::.: gi|119 AVFRLDQVIHSNPAGIQQALAQLSSRQGSAAAPVGHPRPKPGPPQAPQGPSPRPPTRYDP 840 850 860 870 880 890 910 920 930 940 950 hj0672 QRVNSG-LSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPP ::.:. ..:::::::::::::::.:::::::::.:::::::::::::::::::::::: gi|119 QRANNDDVNSDPHFEEPGPMVRGVSGTPRDSAGVNPFPPKRRERPPRKPELLQEESLPPS 900 910 920 930 940 950 960 970 980 990 1000 1010 hj0672 HSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFE ::::::: :::: :::.::::.::::::::::::::::::::::. .::::::::::::: gi|119 HSSGFLGPKPEGSGPQGESRDAGTEALTPHIWNRLHTATSRKSYQSGSMEPWMEPLSPFE 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 hj0672 DVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCE :::::::::::::::::::::::::::::::::::::::.:::::::::: ::::::: : gi|119 DVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGSAEGPPKRPGGPSPLNAVPGE 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 hj0672 GPPGSEP---PRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRP ::::::: ::: ::::::::::::::::::::::::::: :::::: ::: .:::::: gi|119 GPPGSEPSEPPRRRPPAPHDGDRKELPREQPLPPGPIGTERLQRTDRGPEPGSLRPSHRP 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 hj0672 GPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNL ::::::::.:::::: ::: .:::::::::::::::::..:::::::::.:::::::::: gi|119 GPPVQFGTNDKDSDLCLVVRESLKAEKELTASVTEAIPMARDWELLPSASASAEPQSKNL 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 hj0672 DSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRS :::: :: ::::::::::.:::: :: :::.::::.::::::::::::::::::: ::: gi|119 ASGHCGPETSSSGQRLYPEIFYGSPGPPSSQVSGGAIDSQLHPNSGGFRPGTPSLHSYRS 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 hj0672 QPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPS :::::: :::::::::::::.::::::::..::::::::::::::::::::::::::::: gi|119 QPLYLPTGPAPPSALLSGVAVKGQFLDFSALQATELGKLPAGGVLYPPPSFLYSPAFCPS 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 hj0672 PLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSL :::: ::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|119 PLPDPPLLQVRQDLPSPSDFYSAPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSL 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 hj0672 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELK :::::::::::::::::: :::::::::::::::::::::::::: ::::::::::::: gi|119 PPAPPPAPPPLSLLPVGPPLQPPSLAVRPPPAPATRVLPSPARPFGPSLGRAELHPVELK 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 hj0672 PFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPD :::::.::.:::::::::::::.::::::::::::: ::::::::::::.:::::::::: gi|119 PFQDYRKLNSNLGGPGSSRTPPSGRSFSGLNSRLKAPPSTYSGVFRTQRIDLYQQASPPD 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 hj0672 ALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR ::::.:::::::::: ::::::::::::::::::::::::: gi|119 ALRWMPKPWERTGPPSREGPSRRAEEPGSRGDKEPGLPPPR 1500 1510 1520 1530 >>gi|168985803|emb|CAQ06959.1| HLA-B associated transcri (2157 aa) initn: 6044 init1: 5994 opt: 6054 Z-score: 3845.0 bits: 724.7 E(): 1.6e-205 Smith-Waterman score: 9684; 71.071% identity (71.071% similar) in 2157 aa overlap (5-1537:1-2157) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPP--- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLA 780 790 800 810 820 830 hj0672 ------------------------------------------------------------ gi|168 SYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGP 840 850 860 870 880 890 hj0672 ------------------------------------------------------------ gi|168 EAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPP 900 910 920 930 940 950 hj0672 ------------------------------------------------------------ gi|168 PPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYE 960 970 980 990 1000 1010 hj0672 ------------------------------------------------------------ gi|168 RVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHP 1020 1030 1040 1050 1060 1070 hj0672 ------------------------------------------------------------ gi|168 PAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVP 1080 1090 1100 1110 1120 1130 hj0672 ------------------------------------------------------------ gi|168 LAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKK 1140 1150 1160 1170 1180 1190 hj0672 ------------------------------------------------------------ gi|168 PPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPR 1200 1210 1220 1230 1240 1250 hj0672 ------------------------------------------------------------ gi|168 FRRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQ 1260 1270 1280 1290 1300 1310 hj0672 ------------------------------------------------------------ gi|168 ANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQR 1320 1330 1340 1350 1360 1370 hj0672 ------------------------------------------------------------ gi|168 AKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSP 1380 1390 1400 1410 1420 1430 840 850 860 870 hj0672 ---------------------SSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH ::::::::::::::::::::::::::::::::::::::: gi|168 KNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH 1440 1450 1460 1470 1480 1490 880 890 900 910 920 930 hj0672 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF 1500 1510 1520 1530 1540 1550 940 950 960 970 980 990 hj0672 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT 1560 1570 1580 1590 1600 1610 1000 1010 1020 1030 1040 1050 hj0672 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL 1620 1630 1640 1650 1660 1670 1060 1070 1080 1090 1100 1110 hj0672 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE 1680 1690 1700 1710 1720 1730 1120 1130 1140 1150 1160 1170 hj0672 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS 1740 1750 1760 1770 1780 1790 1180 1190 1200 1210 1220 1230 hj0672 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ 1800 1810 1820 1830 1840 1850 1240 1250 1260 1270 1280 1290 hj0672 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP 1860 1870 1880 1890 1900 1910 1300 1310 1320 1330 1340 1350 hj0672 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA 1920 1930 1940 1950 1960 1970 1360 1370 1380 1390 1400 1410 hj0672 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS 1980 1990 2000 2010 2020 2030 1420 1430 1440 1450 1460 1470 hj0672 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST 2040 2050 2060 2070 2080 2090 1480 1490 1500 1510 1520 1530 hj0672 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP 2100 2110 2120 2130 2140 2150 hj0672 R : gi|168 R >>gi|114606399|ref|XP_001155868.1| PREDICTED: similar to (2031 aa) initn: 5932 init1: 5932 opt: 6050 Z-score: 3842.8 bits: 724.2 E(): 2.1e-205 Smith-Waterman score: 9846; 74.840% identity (75.283% similar) in 2031 aa overlap (5-1537:1-2031) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|114 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PASNQLKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|114 GDQDKAAKERESAEQSSGPGPSLRPQNSATWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH ::.::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|114 GHKDSQSASGEERPPEADGKKSNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPP--------- :::::::::::::::::::::::::.::::::::::::::::::::::::: gi|114 LRERGTPPVDPKLAWVGDVFTATPADPRPLTSPLRQAADEDDKGMRSETPPKPPPPTKVE 780 790 800 810 820 830 hj0672 ------------------------------------------------------------ gi|114 ELPPKPLEQGDETPKAPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYERVGPTS 840 850 860 870 880 890 hj0672 ------------------------------------------------------------ gi|114 CRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPAPRGR 900 910 920 930 940 950 hj0672 ------------------------------------------------------------ gi|114 TASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLAPPPP 960 970 980 990 1000 1010 hj0672 ------------------------------------------------------------ gi|114 GAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPPTGPL 1020 1030 1040 1050 1060 1070 hj0672 ------------------------------------------------------------ gi|114 PPSKEPLKEKLIPGPLSPVARGGSSGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQ 1080 1090 1100 1110 1120 1130 hj0672 ------------------------------------------------------------ gi|114 ERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQANEEWE 1140 1150 1160 1170 1180 1190 hj0672 ------------------------------------------------------------ gi|114 TASESSDFASERRGDKEAPPPVLLTPKAMGTPGGGGGGAVPGISAMSRGDLSQRAKDLSK 1200 1210 1220 1230 1240 1250 hj0672 ------------------------------------------------------------ gi|114 RSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRP 1260 1270 1280 1290 1300 1310 840 850 860 870 880 hj0672 ---------VPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPG .:::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPG 1320 1330 1340 1350 1360 1370 890 900 910 920 930 940 hj0672 PPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRE 1380 1390 1400 1410 1420 1430 950 960 970 980 990 1000 hj0672 RPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKS 1440 1450 1460 1470 1480 1490 1010 1020 1030 1040 1050 1060 hj0672 YRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEG 1500 1510 1520 1530 1540 1550 1070 1080 1090 1100 1110 1120 hj0672 PPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTD ::::::::::::::::::::::::::::::::.::::::::.:::::::::::::::::: gi|114 PPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPNDGDRKELPQEQPLPPGPIGTERSQRTD 1560 1570 1580 1590 1600 1610 1130 1140 1150 1160 1170 1180 hj0672 RGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELL 1620 1630 1640 1650 1660 1670 1190 1200 1210 1220 1230 1240 hj0672 PSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSG :::::::::::::: :::: :::::::::::::::::::::::::::::::::::::::: gi|114 PSAAASAEPQSKNLGSGHCGPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSG 1680 1690 1700 1710 1720 1730 1250 1260 1270 1280 1290 1300 hj0672 GFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLPAGGVLY ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|114 GFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTLQATELGKLPAGGVLY 1740 1750 1760 1770 1780 1790 1310 1320 1330 1340 1350 1360 hj0672 PPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLP 1800 1810 1820 1830 1840 1850 1370 1380 1390 1400 1410 1420 hj0672 MVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFP 1860 1870 1880 1890 1900 1910 1430 1440 1450 1460 1470 1480 hj0672 ASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFR ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|114 ASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPAGRSFSGLNSRLKATPSTYSGVFR 1920 1930 1940 1950 1960 1970 1490 1500 1510 1520 1530 hj0672 TQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR 1980 1990 2000 2010 2020 2030 >>gi|56206352|emb|CAI18500.1| HLA-B associated transcrip (2157 aa) initn: 6035 init1: 5985 opt: 6045 Z-score: 3839.3 bits: 723.6 E(): 3.3e-205 Smith-Waterman score: 9657; 70.932% identity (70.978% similar) in 2157 aa overlap (5-1537:1-2157) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|562 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPP--- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLA 780 790 800 810 820 830 hj0672 ------------------------------------------------------------ gi|562 SYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGP 840 850 860 870 880 890 hj0672 ------------------------------------------------------------ gi|562 EAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPP 900 910 920 930 940 950 hj0672 ------------------------------------------------------------ gi|562 PPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYE 960 970 980 990 1000 1010 hj0672 ------------------------------------------------------------ gi|562 RVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHP 1020 1030 1040 1050 1060 1070 hj0672 ------------------------------------------------------------ gi|562 PAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVP 1080 1090 1100 1110 1120 1130 hj0672 ------------------------------------------------------------ gi|562 LAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKK 1140 1150 1160 1170 1180 1190 hj0672 ------------------------------------------------------------ gi|562 PPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPR 1200 1210 1220 1230 1240 1250 hj0672 ------------------------------------------------------------ gi|562 FRRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQ 1260 1270 1280 1290 1300 1310 hj0672 ------------------------------------------------------------ gi|562 ANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQR 1320 1330 1340 1350 1360 1370 hj0672 ------------------------------------------------------------ gi|562 AKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSP 1380 1390 1400 1410 1420 1430 840 850 860 870 hj0672 ---------------------SSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH ::::::::::::::::::::::::::::::::::::::: gi|562 KNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH 1440 1450 1460 1470 1480 1490 880 890 900 910 920 930 hj0672 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF 1500 1510 1520 1530 1540 1550 940 950 960 970 980 990 hj0672 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT 1560 1570 1580 1590 1600 1610 1000 1010 1020 1030 1040 1050 hj0672 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL 1620 1630 1640 1650 1660 1670 1060 1070 1080 1090 1100 1110 hj0672 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE 1680 1690 1700 1710 1720 1730 1120 1130 1140 1150 1160 1170 hj0672 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 RSQHTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS 1740 1750 1760 1770 1780 1790 1180 1190 1200 1210 1220 1230 hj0672 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ 1800 1810 1820 1830 1840 1850 1240 1250 1260 1270 1280 1290 hj0672 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP 1860 1870 1880 1890 1900 1910 1300 1310 1320 1330 1340 1350 hj0672 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA 1920 1930 1940 1950 1960 1970 1360 1370 1380 1390 1400 1410 hj0672 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|562 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPSLSLLPVGPALQPPSLAVRPPPAPATRVLPS 1980 1990 2000 2010 2020 2030 1420 1430 1440 1450 1460 1470 hj0672 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST 2040 2050 2060 2070 2080 2090 1480 1490 1500 1510 1520 1530 hj0672 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP 2100 2110 2120 2130 2140 2150 hj0672 R : gi|562 R >>gi|4337110|gb|AAD18086.1| BAT2 [Homo sapiens] (2157 aa) initn: 6035 init1: 5985 opt: 6045 Z-score: 3839.3 bits: 723.6 E(): 3.3e-205 Smith-Waterman score: 9654; 70.932% identity (70.978% similar) in 2157 aa overlap (5-1537:1-2157) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|433 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPP--- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLA 780 790 800 810 820 830 hj0672 ------------------------------------------------------------ gi|433 SYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGP 840 850 860 870 880 890 hj0672 ------------------------------------------------------------ gi|433 EAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPP 900 910 920 930 940 950 hj0672 ------------------------------------------------------------ gi|433 PPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYE 960 970 980 990 1000 1010 hj0672 ------------------------------------------------------------ gi|433 RVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHP 1020 1030 1040 1050 1060 1070 hj0672 ------------------------------------------------------------ gi|433 PAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVP 1080 1090 1100 1110 1120 1130 hj0672 ------------------------------------------------------------ gi|433 LAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKK 1140 1150 1160 1170 1180 1190 hj0672 ------------------------------------------------------------ gi|433 PPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPR 1200 1210 1220 1230 1240 1250 hj0672 ------------------------------------------------------------ gi|433 FRRLKQERENAARGSEGKPSLTLPASAPAPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQ 1260 1270 1280 1290 1300 1310 hj0672 ------------------------------------------------------------ gi|433 ANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQR 1320 1330 1340 1350 1360 1370 hj0672 ------------------------------------------------------------ gi|433 AKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSP 1380 1390 1400 1410 1420 1430 840 850 860 870 hj0672 ---------------------SSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH ::::::::::::::::::::::::::::::::::::::: gi|433 KNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH 1440 1450 1460 1470 1480 1490 880 890 900 910 920 930 hj0672 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF 1500 1510 1520 1530 1540 1550 940 950 960 970 980 990 hj0672 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT 1560 1570 1580 1590 1600 1610 1000 1010 1020 1030 1040 1050 hj0672 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL 1620 1630 1640 1650 1660 1670 1060 1070 1080 1090 1100 1110 hj0672 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE 1680 1690 1700 1710 1720 1730 1120 1130 1140 1150 1160 1170 hj0672 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 RSQHTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS 1740 1750 1760 1770 1780 1790 1180 1190 1200 1210 1220 1230 hj0672 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ 1800 1810 1820 1830 1840 1850 1240 1250 1260 1270 1280 1290 hj0672 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP 1860 1870 1880 1890 1900 1910 1300 1310 1320 1330 1340 1350 hj0672 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA 1920 1930 1940 1950 1960 1970 1360 1370 1380 1390 1400 1410 hj0672 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS 1980 1990 2000 2010 2020 2030 1420 1430 1440 1450 1460 1470 hj0672 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST 2040 2050 2060 2070 2080 2090 1480 1490 1500 1510 1520 1530 hj0672 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|433 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGLPPREGPSRRAEEPGSRGDKEPGLPPP 2100 2110 2120 2130 2140 2150 hj0672 R : gi|433 R >>gi|73920186|sp|P48634|BAT2_HUMAN Large proline-rich pr (2157 aa) initn: 6035 init1: 5985 opt: 6045 Z-score: 3839.3 bits: 723.6 E(): 3.3e-205 Smith-Waterman score: 9675; 71.025% identity (71.025% similar) in 2157 aa overlap (5-1537:1-2157) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|739 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPP--- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLA 780 790 800 810 820 830 hj0672 ------------------------------------------------------------ gi|739 SYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGP 840 850 860 870 880 890 hj0672 ------------------------------------------------------------ gi|739 EAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPP 900 910 920 930 940 950 hj0672 ------------------------------------------------------------ gi|739 PPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYE 960 970 980 990 1000 1010 hj0672 ------------------------------------------------------------ gi|739 RVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHP 1020 1030 1040 1050 1060 1070 hj0672 ------------------------------------------------------------ gi|739 PAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVP 1080 1090 1100 1110 1120 1130 hj0672 ------------------------------------------------------------ gi|739 LAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKK 1140 1150 1160 1170 1180 1190 hj0672 ------------------------------------------------------------ gi|739 PPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPR 1200 1210 1220 1230 1240 1250 hj0672 ------------------------------------------------------------ gi|739 FRRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQ 1260 1270 1280 1290 1300 1310 hj0672 ------------------------------------------------------------ gi|739 ANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQR 1320 1330 1340 1350 1360 1370 hj0672 ------------------------------------------------------------ gi|739 AKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSP 1380 1390 1400 1410 1420 1430 840 850 860 870 hj0672 ---------------------SSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH ::::::::::::::::::::::::::::::::::::::: gi|739 KNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH 1440 1450 1460 1470 1480 1490 880 890 900 910 920 930 hj0672 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF 1500 1510 1520 1530 1540 1550 940 950 960 970 980 990 hj0672 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT 1560 1570 1580 1590 1600 1610 1000 1010 1020 1030 1040 1050 hj0672 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL 1620 1630 1640 1650 1660 1670 1060 1070 1080 1090 1100 1110 hj0672 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE 1680 1690 1700 1710 1720 1730 1120 1130 1140 1150 1160 1170 hj0672 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS 1740 1750 1760 1770 1780 1790 1180 1190 1200 1210 1220 1230 hj0672 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ 1800 1810 1820 1830 1840 1850 1240 1250 1260 1270 1280 1290 hj0672 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP 1860 1870 1880 1890 1900 1910 1300 1310 1320 1330 1340 1350 hj0672 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA 1920 1930 1940 1950 1960 1970 1360 1370 1380 1390 1400 1410 hj0672 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS 1980 1990 2000 2010 2020 2030 1420 1430 1440 1450 1460 1470 hj0672 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST 2040 2050 2060 2070 2080 2090 1480 1490 1500 1510 1520 1530 hj0672 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP 2100 2110 2120 2130 2140 2150 hj0672 R : gi|739 R >>gi|168984722|emb|CAQ06970.1| HLA-B associated transcri (2157 aa) initn: 6028 init1: 5978 opt: 6038 Z-score: 3834.9 bits: 722.8 E(): 5.8e-205 Smith-Waterman score: 9654; 70.932% identity (70.932% similar) in 2157 aa overlap (5-1537:1-2157) 10 20 30 40 50 60 hj0672 ASSAMSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 110 120 hj0672 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPLESQPLPASQT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|168 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 60 70 80 90 100 110 130 140 150 160 170 180 hj0672 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAA 120 130 140 150 160 170 190 200 210 220 230 240 hj0672 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQ 180 190 200 210 220 230 250 260 270 280 290 300 hj0672 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMR 240 250 260 270 280 290 310 320 330 340 350 360 hj0672 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAE 300 310 320 330 340 350 370 380 390 400 410 420 hj0672 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPH 360 370 380 390 400 410 430 440 450 460 470 480 hj0672 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 420 430 440 450 460 470 490 500 510 520 530 540 hj0672 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 480 490 500 510 520 530 550 560 570 580 590 600 hj0672 ASAPTPEKEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSK 540 550 560 570 580 590 610 620 630 640 650 660 hj0672 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLL 600 610 620 630 640 650 670 680 690 700 710 720 hj0672 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPP 660 670 680 690 700 710 730 740 750 760 770 780 hj0672 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAM 720 730 740 750 760 770 790 800 810 820 830 hj0672 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPP--- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLA 780 790 800 810 820 830 hj0672 ------------------------------------------------------------ gi|168 SYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGP 840 850 860 870 880 890 hj0672 ------------------------------------------------------------ gi|168 EAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPP 900 910 920 930 940 950 hj0672 ------------------------------------------------------------ gi|168 PPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYE 960 970 980 990 1000 1010 hj0672 ------------------------------------------------------------ gi|168 RVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHP 1020 1030 1040 1050 1060 1070 hj0672 ------------------------------------------------------------ gi|168 PAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVP 1080 1090 1100 1110 1120 1130 hj0672 ------------------------------------------------------------ gi|168 LAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKK 1140 1150 1160 1170 1180 1190 hj0672 ------------------------------------------------------------ gi|168 PPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPR 1200 1210 1220 1230 1240 1250 hj0672 ------------------------------------------------------------ gi|168 FRRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQ 1260 1270 1280 1290 1300 1310 hj0672 ------------------------------------------------------------ gi|168 ANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQR 1320 1330 1340 1350 1360 1370 hj0672 ------------------------------------------------------------ gi|168 AKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSP 1380 1390 1400 1410 1420 1430 840 850 860 870 hj0672 ---------------------SSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH ::::::::::::::::::::::::::::::::::::::: gi|168 KNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH 1440 1450 1460 1470 1480 1490 880 890 900 910 920 930 hj0672 PRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPF 1500 1510 1520 1530 1540 1550 940 950 960 970 980 990 hj0672 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHT 1560 1570 1580 1590 1600 1610 1000 1010 1020 1030 1040 1050 hj0672 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGL 1620 1630 1640 1650 1660 1670 1060 1070 1080 1090 1100 1110 hj0672 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTE 1680 1690 1700 1710 1720 1730 1120 1130 1140 1150 1160 1170 hj0672 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVS 1740 1750 1760 1770 1780 1790 1180 1190 1200 1210 1220 1230 hj0672 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQ 1800 1810 1820 1830 1840 1850 1240 1250 1260 1270 1280 1290 hj0672 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQFLDFSTMQATELGKLP 1860 1870 1880 1890 1900 1910 1300 1310 1320 1330 1340 1350 hj0672 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 AGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPA 1920 1930 1940 1950 1960 1970 1360 1370 1380 1390 1400 1410 hj0672 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPS 1980 1990 2000 2010 2020 2030 1420 1430 1440 1450 1460 1470 hj0672 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPST 2040 2050 2060 2070 2080 2090 1480 1490 1500 1510 1520 1530 hj0672 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 YSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPP 2100 2110 2120 2130 2140 2150 hj0672 R : gi|168 R 1537 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 18:18:35 2008 done: Tue Aug 12 18:21:08 2008 Total Scan time: 1288.900 Total Display time: 1.870 Function used was FASTA [version 34.26.5 April 26, 2007]