hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-18454273/chunk_1/iprscan-20080812-18454273.nocrc
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Query sequence: hj07171
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00430                                                 193.6    1.8e-53   1
SM00399                                                 150.3      2e-40   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00399    1/1     160   231 ..     1    72 []   150.3    2e-40
SM00430    1/1     298   457 ..     1   158 []   193.6  1.8e-53

Alignments of top-scoring domains:
SM00399: domain 1 of 1, from 160 to 231: score 150.3, E = 2e-40
                   *->sepCaVCgdpAsGyHfGvlsCrACkaFFRRtvvlkkkYkCkknnnCe
                       ++Ca+Cgd++sG+H+Gv sC++Ck+FF+Rtv+++++Y+C+ n++C 
     hj07171   160    KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCL 206  

                   idkkgRnrCRaCRlkKClevGMnpe<-*
                   idk++RnrC++CR++KCl++GM++e   
     hj07171   207 IDKRQRNRCQYCRYQKCLAMGMKRE    231  

SM00430: domain 1 of 1, from 298 to 457: score 193.6, E = 1.8e-53
                   *->ewwerdllltvewaksfpfFreLsleDqiiLLksfwfelllLesayr
                      + ++++l+++vewak++p+F+eL+l+Dq+iLL+++w ell+   ++r
     hj07171   298    QAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHR 344  

                   sa.lkksdlllfpdgtyirpd....lf.pfldrildelv.plreLkltde
                   s+  k+ ++ll+ ++  +r++ ++ + + ++dr+l elv+++r+++++++
     hj07171   345 SIaVKD-GILLATGLHVHRNSahsaGVgAIFDRVLTELVsKMRDMQMDKT 393  

                   EyalLkaillfnpagpglseegqeiveklqeklsnaLhdYylknypmpny
                   E+ +L ai+lfnp+ +gls+  +  ve+l+ek++  L  Y++++yp  ++
     hj07171   394 ELGCLRAIVLFNPDSKGLSN--PAEVEALREKVYASLEAYCKHKYP--EQ 439  

                   psRfakLllllpslrkis<-*
                   p+RfakLll+lp+lr+i    
     hj07171   440 PGRFAKLLLRLPALRSIG    457  

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