hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-15592987/chunk_1/iprscan-20090618-15592987.nocrc
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Query sequence: hj08059
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF01630.9.ls   Hyaluronidase                            742.8   2.1e-220   1
PF01630.9.fs   Hyaluronidase                            740.8     8e-220   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF01630.9.fs     1/1      35   368 ..     1   348 []   740.8   8e-220
PF01630.9.ls     1/1      35   368 ..     1   348 []   742.8 2.1e-220

Alignments of top-scoring domains:
PF01630.9.fs: domain 1 of 1, from 35 to 368: score 740.8, E = 8e-220
                   *->fraPPvipnrpFlvvWNVPTemClkrfgvplDvslFsiiaNprqtfv
                      ++ P ++p+rpF+v+WNVP+++C++rfgv+l++++++iiaN++q+f+
     hj08059    35    QPLP-QVPERPFSVLWNVPSAHCEARFGVHLPLNALGIIANRGQHFH 80   

                   GGqniTIFYvdrLGlYPyidptgegNvkpvnGGiPQngsLtaHLakakkd
                   G qn+TIFY+++LGlYPy++p+g    +++nGGiPQ+++L++HLa a+++
     hj08059    81 G-QNMTIFYKNQLGLYPYFGPRG----TAHNGGIPQALPLDRHLALAAYQ 125  

                   IehyiPdedfaGlAVIDWEeWRPtWarNWgpkdiYkkkSieLVqqqHPdw
                   I+h++++ +faG+AV+DWEeW+P+Wa+NWg++++Y+++S++++qq++Pd+
     hj08059   126 IHHSLRP-GFAGPAVLDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDL 174  

                   dpteveqkAkrdFEkAAraFMeETLkLGKaLRPnaLWGYYlFPdCYNGhd
                   dp+e+++kA+++FE+AAra+Me+TL++++aLRP++LWG+Y++P+C+NG++
     hj08059   175 DPQEQLYKAYTGFEQAARALMEDTLRVAQALRPHGLWGFYHYPACGNGWH 224  

                   ynqpnesYtGqCpavekkrNDqLsWLWkeStALfPSiYLkprLkssrkvg
                   ++++n  YtG+C+a++ +rN+qL+WLW++S+ALfPSiYL+prL++++++ 
     hj08059   225 SMASN--YTGRCHAATLARNTQLHWLWAASSALFPSIYLPPRLPPAHHQA 272  

                   qLylVrhRVkEAiRVakvsdashPlPVfvYvryvfydrtdtfLsedDLvs
                      +VrhR++EA+RVa v++++ PlPV++Yvr ++++r+++fLs+dDLv+
     hj08059   273 ---FVRHRLEEAFRVALVGHRH-PLPVLAYVR-LTHRRSGRFLSQDDLVQ 317  

                   TiGesaalGAaGiViWgsssltrskesCqaLkeYldttLGPYivNVTlAa
                   +iG+saalGAaG+V+Wg++sl++s+e+C++L++Yl++tLGPY++NVT+Aa
     hj08059   318 SIGVSAALGAAGVVLWGDLSLSSSEEECWHLHDYLVDTLGPYVINVTRAA 367  

                   k<-*
                   +   
     hj08059   368 M    368  

PF01630.9.ls: domain 1 of 1, from 35 to 368: score 742.8, E = 2.1e-220
                   *->fraPPvipnrpFlvvWNVPTemClkrfgvplDvslFsiiaNprqtfv
                      ++ P ++p+rpF+v+WNVP+++C++rfgv+l++++++iiaN++q+f+
     hj08059    35    QPLP-QVPERPFSVLWNVPSAHCEARFGVHLPLNALGIIANRGQHFH 80   

                   GGqniTIFYvdrLGlYPyidptgegNvkpvnGGiPQngsLtaHLakakkd
                   G qn+TIFY+++LGlYPy++p+g    +++nGGiPQ+++L++HLa a+++
     hj08059    81 G-QNMTIFYKNQLGLYPYFGPRG----TAHNGGIPQALPLDRHLALAAYQ 125  

                   IehyiPdedfaGlAVIDWEeWRPtWarNWgpkdiYkkkSieLVqqqHPdw
                   I+h++++ +faG+AV+DWEeW+P+Wa+NWg++++Y+++S++++qq++Pd+
     hj08059   126 IHHSLRP-GFAGPAVLDWEEWCPLWAGNWGRRRAYQAASWAWAQQVFPDL 174  

                   dpteveqkAkrdFEkAAraFMeETLkLGKaLRPnaLWGYYlFPdCYNGhd
                   dp+e+++kA+++FE+AAra+Me+TL++++aLRP++LWG+Y++P+C+NG++
     hj08059   175 DPQEQLYKAYTGFEQAARALMEDTLRVAQALRPHGLWGFYHYPACGNGWH 224  

                   ynqpnesYtGqCpavekkrNDqLsWLWkeStALfPSiYLkprLkssrkvg
                   ++++n  YtG+C+a++ +rN+qL+WLW++S+ALfPSiYL+prL++++++ 
     hj08059   225 SMASN--YTGRCHAATLARNTQLHWLWAASSALFPSIYLPPRLPPAHHQA 272  

                   qLylVrhRVkEAiRVakvsdashPlPVfvYvryvfydrtdtfLsedDLvs
                      +VrhR++EA+RVa v++++ PlPV++Yvr ++++r+++fLs+dDLv+
     hj08059   273 ---FVRHRLEEAFRVALVGHRH-PLPVLAYVR-LTHRRSGRFLSQDDLVQ 317  

                   TiGesaalGAaGiViWgsssltrskesCqaLkeYldttLGPYivNVTlAa
                   +iG+saalGAaG+V+Wg++sl++s+e+C++L++Yl++tLGPY++NVT+Aa
     hj08059   318 SIGVSAALGAAGVVLWGDLSLSSSEEECWHLHDYLVDTLGPYVINVTRAA 367  

                   k<-*
                   +   
     hj08059   368 M    368  

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