hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-19240981/chunk_1/iprscan-20080812-19240981.nocrc
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Query sequence: hj08120
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       262.2      1e-75   1
PF00069.15.fs Protein kinase domain                       260.2    3.8e-75   1
PF07714.7.fs Protein tyrosine kinase                      31.9    3.5e-09   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      44   339 ..     1   287 []   260.2  3.8e-75
PF07714.7.fs   1/1      44   193 ..     1   162 [.    31.9  3.5e-09
PF00069.15.ls   1/1      44   339 ..     1   287 []   262.2    1e-75

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 44 to 339: score 260.2, E = 3.8e-75
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      y+ l+++GsG+ G V+ a++    + VA+K+++++ ++    k+a r
     hj08120    44    YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 90   

                   lsEiqilkrLsHpNIvrlidvfed......kdhlylVlEycegGLrvldL
                     E+ ++k ++H+NI+ l+ vf+ +++ ++ +++ylV+E+++       L
     hj08120    91 --ELVLMKCVNHKNIISLLNVFTPqktleeFQDVYLVMELMDA-----NL 133  

                   fdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKPeNI
                   + +++        ++++ +     ++Q+l+g+++LHs giiHRDLKP+NI
     hj08120   134 CQVIQ--------MeLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 175  

                   LldnngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggn
                    +++++++    Ki DFGlA+    + s  +t +v+T++Y+APEv+l g 
     hj08120   176 VVKSDCTL----KILDFGLART--AgTSFmMTPYVVTRYYRAPEVIL-GM 218  

                   gygtkvDvWSlGvilyelltGkpPFsgevqds.ldq.lqlirkilgpple
                   gy   vD+WS+G+i+ e++  k +F+g+   + +dq +++i++ + p +e
     hj08120   219 GYKENVDIWSVGCIMGEMVRHKILFPGR---DyIDQwNKVIEQLGTPCPE 265  

                   fdspewdsisrse.fr....................r.l.pnlseeakdL
                   f      +++++ + r++  + + ++  +++  + +++ +++  + a+dL
     hj08120   266 FMKKLQPTVRNYVeNRpkyagltfpklfpdslfpadSeHnKLKASQARDL 315  

                   ikkcLnkDPskRltaeeilqHPwf<-*
                   ++k+L  DP+kR++ +++lqHP++   
     hj08120   316 LSKMLVIDPAKRISVDDALQHPYI    339  

PF07714.7.fs: domain 1 of 1, from 44 to 193: score 31.9, E = 3.5e-09
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei
                       + +k +G+Ga G V+ ++        +  VA+K+L+++    + + 
     hj08120    44    YQNLKPIGSGAQGIVCAAYDA----VLDRNVAIKKLsRP-FQNQTH- 84   

                   eredFlrEAsiMkklGdHpNiVrLlGvct.....kegePggpglyiVtEy
                     +   rE+ +Mk   +H+Ni++Ll v t++++ +e +     +y+V+E+
     hj08120    85 -AKRAYRELVLMKCV-NHKNIISLLNVFTpqktlEEFQD----VYLVMEL 128  

                   megGdLldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAA
                   m   +L    +       L+ +++    +Q  +G  +L+s +++HRDL  
     hj08120   129 MDA-NLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 172  

                   RNcLVsenlvVKIsDFGLaRd<-*
                    N+ V+++ + KI DFGLaR+   
     hj08120   173 SNIVVKSDCTLKILDFGLART    193  

PF00069.15.ls: domain 1 of 1, from 44 to 339: score 262.2, E = 1e-75
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      y+ l+++GsG+ G V+ a++    + VA+K+++++ ++    k+a r
     hj08120    44    YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR 90   

                   lsEiqilkrLsHpNIvrlidvfed......kdhlylVlEycegGLrvldL
                     E+ ++k ++H+NI+ l+ vf+ +++ ++ +++ylV+E+++       L
     hj08120    91 --ELVLMKCVNHKNIISLLNVFTPqktleeFQDVYLVMELMDA-----NL 133  

                   fdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKPeNI
                   + +++        ++++ +     ++Q+l+g+++LHs giiHRDLKP+NI
     hj08120   134 CQVIQ--------MeLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 175  

                   LldnngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggn
                    +++++++    Ki DFGlA+    + s  +t +v+T++Y+APEv+l g 
     hj08120   176 VVKSDCTL----KILDFGLART--AgTSFmMTPYVVTRYYRAPEVIL-GM 218  

                   gygtkvDvWSlGvilyelltGkpPFsgevqds.ldq.lqlirkilgpple
                   gy   vD+WS+G+i+ e++  k +F+g+   + +dq +++i++ + p +e
     hj08120   219 GYKENVDIWSVGCIMGEMVRHKILFPGR---DyIDQwNKVIEQLGTPCPE 265  

                   fdspewdsisrse.fr....................r.l.pnlseeakdL
                   f      +++++ + r++  + + ++  +++  + +++ +++  + a+dL
     hj08120   266 FMKKLQPTVRNYVeNRpkyagltfpklfpdslfpadSeHnKLKASQARDL 315  

                   ikkcLnkDPskRltaeeilqHPwf<-*
                   ++k+L  DP+kR++ +++lqHP++   
     hj08120   316 LSKMLVIDPAKRISVDDALQHPYI    339  

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