# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk00170.fasta.nr -Q hk00170.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk00170, 179 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6820644 sequences Expectation_n fit: rho(ln(x))= 5.0806+/-0.000198; mu= 9.3059+/- 0.011 mean_var=95.6533+/-17.911, 0's: 41 Z-trim: 184 B-trim: 0 in 0/65 Lambda= 0.131137 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087702|dbj|BAD92298.1| Serum amyloid A activa ( 179) 1304 255.8 2.2e-66 gi|119600401|gb|EAW79995.1| MYC-associated zinc fi ( 512) 941 187.6 2.1e-45 gi|27371184|gb|AAH41629.1| MAZ protein [Homo sapie ( 264) 802 161.0 1.1e-37 gi|73958473|ref|XP_849559.1| PREDICTED: similar to ( 403) 802 161.2 1.5e-37 gi|119600408|gb|EAW80002.1| MYC-associated zinc fi ( 470) 802 161.2 1.7e-37 gi|3986438|gb|AAC84007.1| serum amyloid A-activati ( 477) 802 161.3 1.7e-37 gi|3024110|sp|P56270|MAZ_HUMAN Myc-associated zinc ( 477) 802 161.3 1.7e-37 gi|22652730|gb|AAN03800.1|AF489858_1 serum amyloid ( 493) 802 161.3 1.7e-37 gi|119600403|gb|EAW79997.1| MYC-associated zinc fi ( 493) 802 161.3 1.7e-37 gi|119600409|gb|EAW80003.1| MYC-associated zinc fi ( 525) 802 161.3 1.8e-37 gi|119600405|gb|EAW79999.1| MYC-associated zinc fi ( 525) 802 161.3 1.8e-37 gi|995935|gb|AAB04121.1| MAZ ( 537) 802 161.3 1.8e-37 gi|194219054|ref|XP_001915532.1| PREDICTED: simila ( 279) 797 160.1 2.3e-37 gi|126215750|gb|ABN80995.1| Myc-associated zinc fi ( 477) 789 158.8 9.2e-37 gi|189442057|gb|AAI67175.1| MYC-associated zinc fi ( 477) 789 158.8 9.2e-37 gi|1752742|dbj|BAA12728.1| Myc-associated zinc-fin ( 497) 785 158.1 1.6e-36 gi|6016530|sp|P56671|MAZ_MOUSE Myc-associated zinc ( 477) 784 157.9 1.8e-36 gi|4521188|dbj|BAA76280.1| MUSPUR [Mus musculus] ( 479) 784 157.9 1.8e-36 gi|76009225|gb|ABA39074.1| transcription factor Pu ( 401) 783 157.6 1.8e-36 gi|6016529|sp|P56670|MAZ_MESAU Myc-associated zinc ( 331) 759 152.9 3.7e-35 gi|16905402|gb|AAL31317.1|L01420_1 zinc finger pro ( 253) 723 146.0 3.5e-33 gi|148685545|gb|EDL17492.1| mCG145269 [Mus musculu ( 243) 691 139.9 2.2e-31 gi|3986440|gb|AAC84008.1| serum amyloid A-activati ( 315) 633 129.1 5.4e-28 gi|109128094|ref|XP_001097472.1| PREDICTED: simila ( 315) 612 125.1 8.4e-27 gi|119916954|ref|XP_001255022.1| PREDICTED: simila ( 235) 544 112.1 5.2e-23 gi|27435792|gb|AAO13223.1| Myc-associated zinc fin ( 375) 534 110.4 2.6e-22 gi|3986442|gb|AAC84009.1| serum amyloid A-activati ( 214) 522 107.9 8.7e-22 gi|2979570|gb|AAC08710.1| Similar to fragment of M ( 66) 498 102.8 9.2e-21 gi|125828191|ref|XP_695400.2| PREDICTED: sb:cb1038 ( 464) 503 104.7 1.8e-20 gi|47222631|emb|CAG02996.1| unnamed protein produc ( 467) 503 104.7 1.8e-20 gi|116283232|gb|AAH04758.1| Maz protein [Mus muscu ( 211) 498 103.3 2e-20 gi|112419421|gb|AAI22298.1| Vascular endothelial z ( 460) 497 103.5 3.8e-20 gi|149601908|ref|XP_001517972.1| PREDICTED: simila ( 525) 494 103.0 6.2e-20 gi|126307454|ref|XP_001363202.1| PREDICTED: simila ( 511) 490 102.3 1e-19 gi|119614900|gb|EAW94494.1| zinc finger protein 16 ( 192) 485 100.8 1e-19 gi|119614902|gb|EAW94496.1| zinc finger protein 16 ( 351) 488 101.7 1e-19 gi|151554038|gb|AAI49698.1| VEZF1 protein [Bos tau ( 508) 489 102.1 1.2e-19 gi|73966536|ref|XP_548226.2| PREDICTED: similar to ( 513) 489 102.1 1.2e-19 gi|6137305|sp|Q14119|VEZF1_HUMAN Vascular endothel ( 516) 488 101.9 1.3e-19 gi|109114621|ref|XP_001103313.1| PREDICTED: simila ( 520) 488 101.9 1.4e-19 gi|114669598|ref|XP_523805.2| PREDICTED: zinc fing ( 520) 488 101.9 1.4e-19 gi|119614903|gb|EAW94497.1| zinc finger protein 16 ( 521) 488 101.9 1.4e-19 gi|194217167|ref|XP_001500558.2| PREDICTED: simila ( 650) 488 102.0 1.6e-19 gi|149053810|gb|EDM05627.1| rCG34014 [Rattus norve ( 364) 485 101.2 1.6e-19 gi|119614901|gb|EAW94495.1| zinc finger protein 16 ( 365) 485 101.2 1.6e-19 gi|111598527|gb|AAH80395.1| Vezf1 protein [Xenopus ( 511) 486 101.5 1.7e-19 gi|50417520|gb|AAH77450.1| Znf161-prov protein [Xe ( 512) 486 101.5 1.7e-19 gi|49899965|gb|AAH76974.1| Vascular endothelial zi ( 512) 486 101.5 1.7e-19 gi|148683894|gb|EDL15841.1| vascular endothelial z ( 507) 485 101.3 2e-19 gi|109488761|ref|XP_213421.4| PREDICTED: similar t ( 513) 485 101.3 2e-19 >>gi|62087702|dbj|BAD92298.1| Serum amyloid A activating (179 aa) initn: 1304 init1: 1304 opt: 1304 Z-score: 1346.8 bits: 255.8 E(): 2.2e-66 Smith-Waterman score: 1304; 100.000% identity (100.000% similar) in 179 aa overlap (1-179:1-179) 10 20 30 40 50 60 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLN 10 20 30 40 50 60 70 80 90 100 110 120 hk0017 RHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRCARGLGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRCARGLGR 70 80 90 100 110 120 130 140 150 160 170 hk0017 PLGRGEGGTRRRWPGRGWRGGRRLLRLGKGSHSQGGGRKPLPVTREQGVVLCRGGGPWG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLGRGEGGTRRRWPGRGWRGGRRLLRLGKGSHSQGGGRKPLPVTREQGVVLCRGGGPWG 130 140 150 160 170 >>gi|119600401|gb|EAW79995.1| MYC-associated zinc finger (512 aa) initn: 941 init1: 941 opt: 941 Z-score: 970.2 bits: 187.6 E(): 2.1e-45 Smith-Waterman score: 941; 100.000% identity (100.000% similar) in 132 aa overlap (1-132:236-367) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|119 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 210 220 230 240 250 260 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 270 280 290 300 310 320 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG :::::::::::::::::::::::::::::::::::::::::: gi|119 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRPDHLNSHVRQVHSTERPF 330 340 350 360 370 380 160 170 hk0017 SHSQGGGRKPLPVTREQGVVLCRGGGPWG gi|119 KCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELCNK 390 400 410 420 430 440 >>gi|27371184|gb|AAH41629.1| MAZ protein [Homo sapiens] (264 aa) initn: 802 init1: 802 opt: 802 Z-score: 831.5 bits: 161.0 E(): 1.1e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:7-119) 10 20 30 40 50 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFR :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|273 MVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFR 10 20 30 40 50 60 60 70 80 90 100 110 hk0017 DVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|273 DVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRP 70 80 90 100 110 120 120 130 140 150 160 170 hk0017 ARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKGSHSQGGGRKPLPVTREQGVVLCRG gi|273 DHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDH 130 140 150 160 170 180 >>gi|73958473|ref|XP_849559.1| PREDICTED: similar to Myc (403 aa) initn: 802 init1: 802 opt: 802 Z-score: 829.3 bits: 161.2 E(): 1.5e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:146-258) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|739 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 120 130 140 150 160 170 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 180 190 200 210 220 230 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG ::::::::::::::::::::::: gi|739 VRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHT 240 250 260 270 280 290 >>gi|119600408|gb|EAW80002.1| MYC-associated zinc finger (470 aa) initn: 802 init1: 802 opt: 802 Z-score: 828.5 bits: 161.2 E(): 1.7e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:213-325) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|119 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 190 200 210 220 230 240 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 250 260 270 280 290 300 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG ::::::::::::::::::::::: gi|119 VRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHT 310 320 330 340 350 360 >>gi|3986438|gb|AAC84007.1| serum amyloid A-activating f (477 aa) initn: 802 init1: 802 opt: 802 Z-score: 828.5 bits: 161.3 E(): 1.7e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:237-349) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|398 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 210 220 230 240 250 260 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|398 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 270 280 290 300 310 320 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG ::::::::::::::::::::::: gi|398 VRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHT 330 340 350 360 370 380 >>gi|3024110|sp|P56270|MAZ_HUMAN Myc-associated zinc fin (477 aa) initn: 802 init1: 802 opt: 802 Z-score: 828.5 bits: 161.3 E(): 1.7e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:236-348) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|302 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 210 220 230 240 250 260 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 270 280 290 300 310 320 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG ::::::::::::::::::::::: gi|302 VRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHT 330 340 350 360 370 380 >>gi|22652730|gb|AAN03800.1|AF489858_1 serum amyloid A a (493 aa) initn: 802 init1: 802 opt: 802 Z-score: 828.3 bits: 161.3 E(): 1.7e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:236-348) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|226 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 210 220 230 240 250 260 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 270 280 290 300 310 320 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG ::::::::::::::::::::::: gi|226 VRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHT 330 340 350 360 370 380 >>gi|119600403|gb|EAW79997.1| MYC-associated zinc finger (493 aa) initn: 802 init1: 802 opt: 802 Z-score: 828.3 bits: 161.3 E(): 1.7e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:236-348) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|119 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 210 220 230 240 250 260 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 270 280 290 300 310 320 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG ::::::::::::::::::::::: gi|119 VRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHT 330 340 350 360 370 380 >>gi|119600409|gb|EAW80003.1| MYC-associated zinc finger (525 aa) initn: 802 init1: 802 opt: 802 Z-score: 828.0 bits: 161.3 E(): 1.8e-37 Smith-Waterman score: 802; 100.000% identity (100.000% similar) in 113 aa overlap (1-113:236-348) 10 20 30 hk0017 LSVPQLSGAGGGGGEAGAGGGAAAVAAGGV :::::::::::::::::::::::::::::: gi|119 RRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGV 210 220 230 240 250 260 40 50 60 70 80 90 hk0017 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYH 270 280 290 300 310 320 100 110 120 130 140 150 hk0017 VRSHDGAVHKPYNCSHCGKSFSRCARGLGRPLGRGEGGTRRRWPGRGWRGGRRLLRLGKG ::::::::::::::::::::::: gi|119 VRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHT 330 340 350 360 370 380 179 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 19:33:11 2008 done: Tue Aug 12 19:36:04 2008 Total Scan time: 611.640 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]