hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-19475196/chunk_1/iprscan-20080812-19475196.nocrc
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Query sequence: hk00208
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07528.4.fs DZF                                            525.1   3.5e-167   1
PF07528.4.ls DZF                                            527.1   1.8e-155   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07528.4.fs   1/1     103   351 ..     1   261 []   525.1 3.5e-167
PF07528.4.ls   1/1     103   351 ..     1   261 []   527.1 1.8e-155

Alignments of top-scoring domains:
PF07528.4.fs: domain 1 of 1, from 103 to 351: score 525.1, E = 3.5e-167
                   *->rVGsfaKGTllkGdnvadvVlilktlPTselvealarkveedltsLt
                      rVG++aKG+llkGd+++++Vl++k++PT++l++++a++++++l   +
     hk00208   103    RVGLVAKGLLLKGDLDLELVLLCKEKPTTALLDKVADNLAIQLA--A 147  

                   vepdkYEileSvDealiviknykepqmelgilITSavvrkvrllIvllPe
                   v++dkYEil+SvD+a+ivikn+kep+++l+i++TS+vvr +++++vl++e
     hk00208   148 VTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVR-EEMEKVLAGE 196  

                   nlrklEpelhLDkklclsaLASiRHtkWFeenahhLkPaFiqscqvlIRv
                   +l++++p+++LD+++cl+aLAS+RH+kWF+++a++Lk     sc+++IRv
     hk00208   197 TLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLK-----SCVIVIRV 241  

                   LkDLrrRypefaPLsdWkleLLahkaImNnpsrqalglgeAFRRvfelLA
                   L+DL++R+p+++PL++W+leLL++k+I+  ++++++g+geA+RRv+e+LA
     hk00208   242 LRDLCTRVPTWGPLRGWPLELLCEKSIG--TANRPMGAGEALRRVLECLA 289  

                   SGiflPgSagitDPcEkghtrvltaLTleQqdsvcmtAQtlvRvlAfGnD
                   SGi++P+++gi+DPcEk++t+++++L+++Q+++++++AQ+++R++AfG  
     hk00208   290 SGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFG-- 337  

                   gyhkILGldgltsv<-*
                   ++hk+LG+d+l+s+   
     hk00208   338 QLHKVLGMDPLPSK    351  

PF07528.4.ls: domain 1 of 1, from 103 to 351: score 527.1, E = 1.8e-155
                   *->rVGsfaKGTllkGdnvadvVlilktlPTselvealarkveedltsLt
                      rVG++aKG+llkGd+++++Vl++k++PT++l++++a++++++l   +
     hk00208   103    RVGLVAKGLLLKGDLDLELVLLCKEKPTTALLDKVADNLAIQLA--A 147  

                   vepdkYEileSvDealiviknykepqmelgilITSavvrkvrllIvllPe
                   v++dkYEil+SvD+a+ivikn+kep+++l+i++TS+vvr +++++vl++e
     hk00208   148 VTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVR-EEMEKVLAGE 196  

                   nlrklEpelhLDkklclsaLASiRHtkWFeenahhLkPaFiqscqvlIRv
                   +l++++p+++LD+++cl+aLAS+RH+kWF+++a++Lk     sc+++IRv
     hk00208   197 TLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLK-----SCVIVIRV 241  

                   LkDLrrRypefaPLsdWkleLLahkaImNnpsrqalglgeAFRRvfelLA
                   L+DL++R+p+++PL++W+leLL++k+I+  ++++++g+geA+RRv+e+LA
     hk00208   242 LRDLCTRVPTWGPLRGWPLELLCEKSIG--TANRPMGAGEALRRVLECLA 289  

                   SGiflPgSagitDPcEkghtrvltaLTleQqdsvcmtAQtlvRvlAfGnD
                   SGi++P+++gi+DPcEk++t+++++L+++Q+++++++AQ+++R++AfG  
     hk00208   290 SGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFG-- 337  

                   gyhkILGldgltsv<-*
                   ++hk+LG+d+l+s+   
     hk00208   338 QLHKVLGMDPLPSK    351  

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