hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080812/iprscan-20080812-19584185/chunk_1/iprscan-20080812-19584185.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: hk00294 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00596.11.fs Class II Aldolase and Adducin N-terminal 277.7 2.3e-81 1 PF00596.11.ls Class II Aldolase and Adducin N-terminal 279.6 5.5e-81 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00596.11.fs 1/1 151 350 .. 1 229 [] 277.7 2.3e-81 PF00596.11.ls 1/1 151 350 .. 1 229 [] 279.6 5.5e-81 Alignments of top-scoring domains: PF00596.11.fs: domain 1 of 1, from 151 to 350: score 277.7, E = 2.3e-81 *->qelaaacrllalyGLvtgtaGniSvrvrergeqdlflIkPsGvpyde ++laa +rl++l+G+++ ++++i+ rv+ + q++flI P+G++y+e hk00294 151 CKLAAFYRLADLFGWSQLIYNHITTRVNSE--QEHFLIVPFGLLYSE 195 mtasDlvvvDldgGevleGespgetkflkPssetplHlalYrarPdvgai +tas+lv+++l+g +v+ G+ t+ ++++++++lH+a+Y+arPdv+++ hk00294 196 VTASSLVKINLQGDIVDRGS----TNLGVNQAGFTLHSAIYAARPDVKCV 241 vHtHsphatalSqlgeglpplgtthadyfgvmrygdvpctdyagYdeEiv vH+H+p+++a+S++++gl+p++ +++ ++ +v+++dy+g i hk00294 242 VHIHTPAGAAVSAMKCGLLPISPEALSLG------EVAYHDYHG----IL 281 gdyeenTGgEkVevellakalgapkgrpAvLlrnHGpvtwGkdaetaeeA +d+e e+ l++k+lg++ + +++lrnHG+v++G e++eeA hk00294 282 VDEE--------EKVLIQKNLGPKSK--VLILRNHGLVSVG---ESVEEA 318 avvleeveraaeiqlllksagipmdplllpke<-* +++++++ a+eiq+++++ + ++d+l l+ hk00294 319 FYYIHNLVVACEIQVRTLASAGGPDNLVLLNP 350 PF00596.11.ls: domain 1 of 1, from 151 to 350: score 279.6, E = 5.5e-81 *->qelaaacrllalyGLvtgtaGniSvrvrergeqdlflIkPsGvpyde ++laa +rl++l+G+++ ++++i+ rv+ + q++flI P+G++y+e hk00294 151 CKLAAFYRLADLFGWSQLIYNHITTRVNSE--QEHFLIVPFGLLYSE 195 mtasDlvvvDldgGevleGespgetkflkPssetplHlalYrarPdvgai +tas+lv+++l+g +v+ G+ t+ ++++++++lH+a+Y+arPdv+++ hk00294 196 VTASSLVKINLQGDIVDRGS----TNLGVNQAGFTLHSAIYAARPDVKCV 241 vHtHsphatalSqlgeglpplgtthadyfgvmrygdvpctdyagYdeEiv vH+H+p+++a+S++++gl+p++ +++ ++ +v+++dy+g i hk00294 242 VHIHTPAGAAVSAMKCGLLPISPEALSLG------EVAYHDYHG----IL 281 gdyeenTGgEkVevellakalgapkgrpAvLlrnHGpvtwGkdaetaeeA +d+e e+ l++k+lg++ + +++lrnHG+v++G e++eeA hk00294 282 VDEE--------EKVLIQKNLGPKSK--VLILRNHGLVSVG---ESVEEA 318 avvleeveraaeiqlllksagipmdplllpke<-* +++++++ a+eiq+++++ + ++d+l l+ hk00294 319 FYYIHNLVVACEIQVRTLASAGGPDNLVLLNP 350 //