hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-16054893/chunk_1/iprscan-20090618-16054893.nocrc
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Query sequence: hk00381
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR01197 nramp: metal ion transporter, metal ion (Mn2   961.6     1e-286   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR01197   1/1      81   480 ..     1   429 []   961.6   1e-286

Alignments of top-scoring domains:
TIGR01197: domain 1 of 1, from 81 to 480: score 961.6, E = 1e-286
                   *->RkllkFiGPGFlvSiAYiDPGNysTdlqAGaaagYkLLwviLlSNil
                      Rkl++F+GPGFl+SiAY+DPGN+++dlq+Ga+ag+kLLw++Ll++++
     hk00381    81    RKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLV 127  

                   AlllQrLcARLGvVTGldLaevCrehyPkvlritLwilaElAIIATDlAE
                   +lllQrL+ARLGvVTGl+LaevC+++yPkv+r +Lw+++ElAII++D++E
     hk00381   128 GLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQE 177  

                   VIGTAIALnlLshgrIPLwgGViITivDvFliLfldkpGegSmkGlRiLE
                   VIG+AIA+nlLs grIPLwgGV+ITi+D+F++Lfldk+      GlR+LE
     hk00381   178 VIGSAIAINLLSVGRIPLWGGVLITIADTFVFLFLDKY------GLRKLE 221  

                   afvalLvvvvaisFavelfvakpgtqvkvlfggFvPScavfgtdgllqAv
                   af+++L++++a++F++e++++kp+ q++vl+g+FvPSc++++t++++qAv
     hk00381   222 AFFGFLITIMALTFGYEYVTVKPS-QSQVLKGMFVPSCSGCRTPQIEQAV 270  

                   GILGAtVMPHsLYLhSALVqsRlvdrdvkegnYtvseanmdkvkkskste
                   GI+GA++MPH++YLhSALV+sR+v+r +k++   v+ean+          
     hk00381   271 GIVGAVIMPHNMYLHSALVKSRQVNRNNKQE---VREANK---------- 307  

                   eimeekydnYrpieaaIalslsFsivelvialFtaAlfvntnilvVagCk
                            Y++ie++Ial++sF+i+++v+++F++A+f++tn +vV++C 
     hk00381   308 ---------YFFIESCIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVCT 348  

                   nkSlydAtlynsnnvadaaDLfsiyelLgcllspaAgyiFavgLLaaGqS
                   n S+++A l++++n+++a+D+++++++Lgc+++paA+yi+avg+LaaGqS
     hk00381   349 NTSSPHAGLFPKDNSTLAVDIYKGGVVLGCYFGPAALYIWAVGILAAGQS 398  

                   sgmVgTlSGQiVmEGFlNwrlspwlRRliTRaIAIIPcllvaafagregL
                   s+m+gT+SGQ+VmEGFlN+++s+++R+++TR+IAIIP+llva+f+++e+L
     hk00381   399 STMTGTYSGQFVMEGFLNLKWSRFARVVLTRSIAIIPTLLVAVFQDVEHL 448  

                   tgaLnaSqVvLSllLPFaliPLimFTSskkIM<-*
                   tg++++++V++Sl+LPFaliP+++FTS++++M   
     hk00381   449 TGMNDFLNVLQSLQLPFALIPILTFTSLRPVM    480  

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