# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk00816.fasta.nr -Q hk00816.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk00816, 501 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6831239 sequences Expectation_n fit: rho(ln(x))= 5.5717+/-0.000188; mu= 9.8804+/- 0.011 mean_var=84.6712+/-16.276, 0's: 38 Z-trim: 121 B-trim: 0 in 0/66 Lambda= 0.139382 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087386|dbj|BAD92140.1| pre-mRNA splicing fact ( 501) 3386 690.7 2.1e-196 gi|55961249|emb|CAI13321.1| cell division cycle 40 ( 539) 3376 688.7 8.8e-196 gi|17380181|sp|O60508|PRP17_HUMAN Pre-mRNA-process ( 579) 3376 688.7 9.3e-196 gi|62897001|dbj|BAD96441.1| pre-mRNA splicing fact ( 579) 3371 687.7 1.9e-195 gi|109073035|ref|XP_001088397.1| PREDICTED: cell d ( 579) 3368 687.1 2.8e-195 gi|55731949|emb|CAH92683.1| hypothetical protein [ ( 579) 3352 683.9 2.6e-194 gi|187469667|gb|AAI66724.1| Cdc40 protein [Rattus ( 579) 3345 682.5 7e-194 gi|194216331|ref|XP_001916161.1| PREDICTED: simila ( 578) 3336 680.7 2.5e-193 gi|18202857|sp|Q9DC48|PRP17_MOUSE Pre-mRNA-process ( 579) 3335 680.5 2.8e-193 gi|73973753|ref|XP_532261.2| PREDICTED: similar to ( 579) 3317 676.9 3.5e-192 gi|112362206|gb|AAI20036.1| Cell division cycle 40 ( 579) 3310 675.5 9.2e-192 gi|126310424|ref|XP_001368656.1| PREDICTED: hypoth ( 579) 3238 661.0 2.1e-187 gi|149260820|ref|XP_001477345.1| PREDICTED: cell d ( 583) 3223 658.0 1.7e-186 gi|3283220|gb|AAC25166.1| splicing factor hPRP17 [ ( 542) 3147 642.7 6.4e-182 gi|53128313|emb|CAG31290.1| hypothetical protein [ ( 580) 3048 622.8 6.7e-176 gi|149638880|ref|XP_001508497.1| PREDICTED: hypoth ( 591) 2918 596.6 5e-168 gi|51895851|gb|AAH81103.1| MGC83346 protein [Xenop ( 567) 2896 592.2 1e-166 gi|56972624|gb|AAH88565.1| Cell division cycle 40 ( 567) 2891 591.2 2.1e-166 gi|148726099|emb|CAN88173.1| novel protein (zgc:86 ( 578) 2822 577.3 3.2e-162 gi|56972114|gb|AAH88381.1| Cell division cycle 40 ( 578) 2817 576.3 6.4e-162 gi|148673015|gb|EDL04962.1| mCG15486, isoform CRA_ ( 550) 2789 570.7 3.1e-160 gi|114608847|ref|XP_001154334.1| PREDICTED: cell d ( 476) 2716 556.0 7.2e-156 gi|47224591|emb|CAG03575.1| unnamed protein produc ( 578) 2527 518.0 2.3e-144 gi|72099627|ref|XP_789449.1| PREDICTED: similar to ( 577) 2217 455.7 1.3e-125 gi|66506328|ref|XP_396966.2| PREDICTED: similar to ( 578) 2187 449.6 8.8e-124 gi|156217908|gb|EDO38815.1| predicted protein [Nem ( 576) 2186 449.4 1e-123 gi|156551023|ref|XP_001601045.1| PREDICTED: simila ( 587) 2183 448.8 1.5e-123 gi|74183133|dbj|BAE22524.1| unnamed protein produc ( 338) 2160 444.0 2.5e-122 gi|190584497|gb|EDV24566.1| hypothetical protein T ( 563) 2126 437.4 4.2e-120 gi|193917446|gb|EDW16313.1| GI22293 [Drosophila mo ( 570) 2102 432.5 1.2e-118 gi|194169774|gb|EDW84675.1| GK13002 [Drosophila wi ( 573) 2101 432.3 1.4e-118 gi|194200293|gb|EDX13869.1| GD18480 [Drosophila si ( 576) 2098 431.7 2.1e-118 gi|194121088|gb|EDW43131.1| GM23670 [Drosophila se ( 576) 2097 431.5 2.4e-118 gi|55235235|gb|EAA14836.2| AGAP008925-PA [Anophele ( 587) 2097 431.5 2.5e-118 gi|91091570|ref|XP_967396.1| PREDICTED: similar to ( 562) 2091 430.3 5.5e-118 gi|7300806|gb|AAF55949.1| CG6015-PA [Drosophila me ( 576) 2090 430.1 6.5e-118 gi|190627059|gb|EDV42583.1| GF16948 [Drosophila an ( 570) 2086 429.3 1.1e-117 gi|190656968|gb|EDV54200.1| GG12541 [Drosophila er ( 575) 2086 429.3 1.1e-117 gi|194184336|gb|EDW97947.1| GE24061 [Drosophila ya ( 579) 2086 429.3 1.1e-117 gi|194151888|gb|EDW67322.1| GJ24085 [Drosophila vi ( 570) 2085 429.1 1.3e-117 gi|193895542|gb|EDV94408.1| GH19818 [Drosophila gr ( 569) 2083 428.7 1.7e-117 gi|167879655|gb|EDS43038.1| pre-mRNA-processing fa ( 570) 2079 427.9 3e-117 gi|108880162|gb|EAT44387.1| pre-mrna splicing fact ( 594) 2070 426.1 1.1e-116 gi|54638714|gb|EAL28116.1| GA19297-PA [Drosophila ( 575) 2067 425.5 1.6e-116 gi|193657091|ref|XP_001951193.1| PREDICTED: simila ( 563) 2025 417.1 5.5e-114 gi|119568707|gb|EAW48322.1| cell division cycle 40 ( 340) 1862 384.1 2.7e-104 gi|56753191|gb|AAW24805.1| SJCHGC09311 protein [Sc ( 561) 1849 381.7 2.5e-103 gi|149027747|gb|EDL83241.1| cell division cycle 40 ( 334) 1771 365.8 8.7e-99 gi|119568706|gb|EAW48321.1| cell division cycle 40 ( 321) 1763 364.2 2.6e-98 gi|158590119|gb|EDP28871.1| pre-mRNA splicing fact ( 571) 1742 360.2 7.5e-97 >>gi|62087386|dbj|BAD92140.1| pre-mRNA splicing factor 1 (501 aa) initn: 3386 init1: 3386 opt: 3386 Z-score: 3681.4 bits: 690.7 E(): 2.1e-196 Smith-Waterman score: 3386; 100.000% identity (100.000% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEVA 10 20 30 40 50 60 70 80 90 100 110 120 hk0081 VKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHIN 70 80 90 100 110 120 130 140 150 160 170 180 hk0081 DFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKF 130 140 150 160 170 180 190 200 210 220 230 240 hk0081 KENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTIL 190 200 210 220 230 240 250 260 270 280 290 300 hk0081 HVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSG 250 260 270 280 290 300 310 320 330 340 350 360 hk0081 HLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDT 310 320 330 340 350 360 370 380 390 400 410 420 hk0081 ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV 370 380 390 400 410 420 430 440 450 460 470 480 hk0081 NTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM 430 440 450 460 470 480 490 500 hk0081 DNQILIFGAQNRFRLNKKKNF ::::::::::::::::::::: gi|620 DNQILIFGAQNRFRLNKKKNF 490 500 >>gi|55961249|emb|CAI13321.1| cell division cycle 40 hom (539 aa) initn: 3490 init1: 3376 opt: 3376 Z-score: 3670.1 bits: 688.7 E(): 8.8e-196 Smith-Waterman score: 3376; 99.800% identity (99.800% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|559 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMRVPQSFQNLKEVTAGPQEG 490 500 510 520 530 >>gi|17380181|sp|O60508|PRP17_HUMAN Pre-mRNA-processing (579 aa) initn: 3490 init1: 3376 opt: 3376 Z-score: 3669.6 bits: 688.7 E(): 9.3e-196 Smith-Waterman score: 3376; 99.800% identity (99.800% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|173 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT 490 500 510 520 530 540 >>gi|62897001|dbj|BAD96441.1| pre-mRNA splicing factor 1 (579 aa) initn: 3485 init1: 3371 opt: 3371 Z-score: 3664.2 bits: 687.7 E(): 1.9e-195 Smith-Waterman score: 3371; 99.601% identity (99.800% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|628 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSEAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|628 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT 490 500 510 520 530 540 >>gi|109073035|ref|XP_001088397.1| PREDICTED: cell divis (579 aa) initn: 3482 init1: 3368 opt: 3368 Z-score: 3660.9 bits: 687.1 E(): 2.8e-195 Smith-Waterman score: 3368; 99.401% identity (99.800% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|109 MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSAKPSLAVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|109 GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|109 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT 490 500 510 520 530 540 >>gi|55731949|emb|CAH92683.1| hypothetical protein [Pong (579 aa) initn: 3466 init1: 3352 opt: 3352 Z-score: 3643.6 bits: 683.9 E(): 2.6e-194 Smith-Waterman score: 3352; 99.002% identity (99.601% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|557 MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSAKPSLAVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|557 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKAEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|557 FKENDASNIDGSLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|557 GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|557 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT 490 500 510 520 530 540 >>gi|187469667|gb|AAI66724.1| Cdc40 protein [Rattus norv (579 aa) initn: 3457 init1: 3345 opt: 3345 Z-score: 3635.9 bits: 682.5 E(): 7e-194 Smith-Waterman score: 3345; 98.403% identity (99.800% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::.:::::::::::::::::::.::::.::::::::: gi|187 MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKPSLTVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|187 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFETGQKKTEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS :::::::::::::::::::::::::::..::::::::::::::::::::::::::::::: gi|187 LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|187 GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|187 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT 490 500 510 520 530 540 >>gi|194216331|ref|XP_001916161.1| PREDICTED: similar to (578 aa) initn: 3336 init1: 3336 opt: 3336 Z-score: 3626.2 bits: 680.7 E(): 2.5e-193 Smith-Waterman score: 3336; 98.597% identity (99.800% similar) in 499 aa overlap (1-499:2-500) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::..::::::::::::::::::.:::::::::::::: gi|194 MSAAIAALAASYGSGSGSESDSDSEGGRCPLPAADSLMHLTKSPSAKPSLAVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::.:::::::::::::::::::::::: ::::: gi|194 NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|194 LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|194 GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: gi|194 MDNQILIFGAQNRFRLNKKKFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTK 490 500 510 520 530 540 >>gi|18202857|sp|Q9DC48|PRP17_MOUSE Pre-mRNA-processing (579 aa) initn: 3447 init1: 3335 opt: 3335 Z-score: 3625.1 bits: 680.5 E(): 2.8e-193 Smith-Waterman score: 3335; 98.403% identity (99.601% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::.:::::::::::::::::::.: ::.::::::::: gi|182 MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKLSLTVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS :::::::::::::::::::::::::::..::::::::::::::::::::::::::::::: gi|182 LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|182 GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|182 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT 490 500 510 520 530 540 >>gi|73973753|ref|XP_532261.2| PREDICTED: similar to Pre (579 aa) initn: 3429 init1: 3317 opt: 3317 Z-score: 3605.5 bits: 676.9 E(): 3.5e-192 Smith-Waterman score: 3317; 98.004% identity (99.202% similar) in 501 aa overlap (1-501:2-502) 10 20 30 40 50 hk0081 SAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV ::::::::::::::::::::::::..:: ::::::::::::: :.:::::::::::::: gi|739 MSAAIAALAASYGSGSGSESDSDSEGGRCCLPAADSLMHLTKSASTKPSLAVAVDSAPEV 10 20 30 40 50 60 60 70 80 90 100 110 hk0081 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI 70 80 90 100 110 120 120 130 140 150 160 170 hk0081 NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK :::::::::::::::::::::::::::::.:::::::::::::::::::::::: ::::: gi|739 NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKK 130 140 150 160 170 180 180 190 200 210 220 230 hk0081 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI 190 200 210 220 230 240 240 250 260 270 280 290 hk0081 LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|739 LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS 250 260 270 280 290 300 300 310 320 330 340 350 hk0081 GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD 310 320 330 340 350 360 360 370 380 390 400 410 hk0081 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA 370 380 390 400 410 420 420 430 440 450 460 470 hk0081 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS 430 440 450 460 470 480 480 490 500 hk0081 MDNQILIFGAQNRFRLNKKKNF :::::::::::::::::::: : gi|739 MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT 490 500 510 520 530 540 501 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 20:25:26 2008 done: Tue Aug 12 20:27:45 2008 Total Scan time: 876.840 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]