# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk01079.fasta.nr -Q hk01079.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk01079, 421 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6833771 sequences Expectation_n fit: rho(ln(x))= 6.0029+/-0.000191; mu= 7.9945+/- 0.011 mean_var=94.7687+/-18.503, 0's: 45 Z-trim: 90 B-trim: 78 in 1/66 Lambda= 0.131747 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087714|dbj|BAD92304.1| bruno-like 5, RNA bind ( 421) 2847 551.0 1.7e-154 gi|74762534|sp|Q8N6W0|CELF5_HUMAN CUG-BP- and ETR- ( 485) 2046 398.8 1.3e-108 gi|12746396|gb|AAK07476.1|AF329266_1 CUG-BP and ET ( 481) 2045 398.6 1.4e-108 gi|28839403|gb|AAH47522.1| BRUNOL5 protein [Homo s ( 402) 1999 389.8 5.3e-106 gi|189339278|ref|NP_795928.2| bruno-like 5, RNA bi ( 395) 1742 340.9 2.7e-91 gi|152013396|sp|A0JM51|CELF5_XENTR CUG-BP- and ETR ( 486) 1727 338.2 2.3e-90 gi|109481517|ref|XP_001075513.1| PREDICTED: simila ( 445) 1714 335.7 1.2e-89 gi|109480191|ref|XP_234928.4| PREDICTED: similar t ( 703) 1714 335.8 1.7e-89 gi|94732637|emb|CAK04399.1| novel protein similar ( 506) 1468 288.9 1.5e-75 gi|194668831|ref|XP_610805.4| PREDICTED: similar t ( 519) 1464 288.2 2.7e-75 gi|190339155|gb|AAI63416.1| Unknown (protein for M ( 528) 1446 284.8 2.9e-74 gi|73987469|ref|XP_854891.1| PREDICTED: similar to ( 414) 1436 282.8 8.9e-74 gi|73981468|ref|XP_862464.1| PREDICTED: similar to ( 424) 1423 280.3 5e-73 gi|126313732|ref|XP_001366746.1| PREDICTED: simila ( 424) 1412 278.2 2.1e-72 gi|28279033|gb|AAH45711.1| BRUNOL4 protein [Homo s ( 448) 1401 276.2 9.5e-72 gi|148878073|gb|AAI46143.1| BRUNOL4 protein [Bos t ( 475) 1399 275.8 1.3e-71 gi|27753638|gb|AAO22167.1| bruno-like 4 protein [M ( 495) 1399 275.8 1.3e-71 gi|148664598|gb|EDK97014.1| bruno-like 4, RNA bind ( 501) 1399 275.8 1.4e-71 gi|114672887|ref|XP_512100.2| PREDICTED: similar t ( 524) 1396 275.3 2.1e-71 gi|194379036|dbj|BAG58069.1| unnamed protein produ ( 454) 1394 274.8 2.4e-71 gi|75075903|sp|Q4R535|CELF4_MACFA CUG-BP- and ETR- ( 474) 1394 274.8 2.5e-71 gi|118103583|ref|XP_424495.2| PREDICTED: similar t ( 492) 1389 273.9 5e-71 gi|118103585|ref|XP_001231286.1| PREDICTED: simila ( 504) 1389 273.9 5.1e-71 gi|148664594|gb|EDK97010.1| bruno-like 4, RNA bind ( 485) 1386 273.3 7.3e-71 gi|33872777|gb|AAH04167.2| Bruno-like 4, RNA bindi ( 484) 1383 272.8 1.1e-70 gi|26339326|dbj|BAC33334.1| unnamed protein produc ( 484) 1381 272.4 1.4e-70 gi|29387384|gb|AAH48405.1| Brunol4 protein [Mus mu ( 504) 1381 272.4 1.5e-70 gi|148664596|gb|EDK97012.1| bruno-like 4, RNA bind ( 510) 1381 272.4 1.5e-70 gi|55730138|emb|CAH91793.1| hypothetical protein [ ( 456) 1369 270.1 6.5e-70 gi|187761301|ref|NP_001020259.1| bruno-like 4, RNA ( 484) 1369 270.1 6.8e-70 gi|55732010|emb|CAH92712.1| hypothetical protein [ ( 457) 1363 268.9 1.4e-69 gi|55960555|emb|CAI17167.1| trinucleotide repeat c ( 415) 1358 268.0 2.6e-69 gi|148706791|gb|EDL38738.1| trinucleotide repeat c ( 538) 1357 267.9 3.6e-69 gi|22760138|dbj|BAC11082.1| unnamed protein produc ( 484) 1356 267.6 3.8e-69 gi|145306688|gb|ABP57108.1| CUG-BP and ETR-3-like ( 445) 1355 267.4 4e-69 gi|149638168|ref|XP_001508614.1| PREDICTED: simila ( 446) 1349 266.3 8.9e-69 gi|148706793|gb|EDL38740.1| trinucleotide repeat c ( 466) 1348 266.1 1.1e-68 gi|183637597|gb|ACC64599.1| trinucleotide repeat c ( 459) 1346 265.7 1.4e-68 gi|81914478|sp|Q8CIN6|CELF3_MOUSE CUG-BP- and ETR- ( 465) 1346 265.7 1.4e-68 gi|73981464|ref|XP_862411.1| PREDICTED: similar to ( 419) 1344 265.3 1.6e-68 gi|73981454|ref|XP_862276.1| PREDICTED: similar to ( 426) 1344 265.3 1.7e-68 gi|73981472|ref|XP_862518.1| PREDICTED: similar to ( 446) 1344 265.3 1.7e-68 gi|122132428|sp|Q08E07|CELF3_BOVIN CUG-BP- and ETR ( 461) 1344 265.3 1.8e-68 gi|73981474|ref|XP_862540.1| PREDICTED: similar to ( 462) 1344 265.3 1.8e-68 gi|12746392|gb|AAK07474.1|AF329264_1 CUG-BP and ET ( 462) 1344 265.3 1.8e-68 gi|194036214|ref|XP_001929662.1| PREDICTED: simila ( 463) 1344 265.3 1.8e-68 gi|25807801|gb|AAN73884.1| CUG-BP and ETR-3 like f ( 465) 1344 265.3 1.8e-68 gi|74756184|sp|Q5SZQ8.1|CELF3_HUMAN CUG-BP- and ET ( 465) 1344 265.3 1.8e-68 gi|163781027|gb|ABY40803.1| trinucleotide repeat c ( 471) 1344 265.3 1.8e-68 gi|149030747|gb|EDL85784.1| similar to trinucleoti ( 473) 1344 265.3 1.8e-68 >>gi|62087714|dbj|BAD92304.1| bruno-like 5, RNA binding (421 aa) initn: 2847 init1: 2847 opt: 2847 Z-score: 2929.0 bits: 551.0 E(): 1.7e-154 Smith-Waterman score: 2847; 100.000% identity (100.000% similar) in 421 aa overlap (1-421:1-421) 10 20 30 40 50 60 hk0107 RRRRRRLGPAPAMARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RRRRRRLGPAPAMARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF 10 20 30 40 50 60 70 80 90 100 110 120 hk0107 VGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE 70 80 90 100 110 120 130 140 150 160 170 180 hk0107 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG 130 140 150 160 170 180 190 200 210 220 230 240 hk0107 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG 190 200 210 220 230 240 250 260 270 280 290 300 hk0107 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL 250 260 270 280 290 300 310 320 330 340 350 360 hk0107 PATPIAPASGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PATPIAPASGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTA 310 320 330 340 350 360 370 380 390 400 410 420 hk0107 AITPIAHSVPQPPPLLQQQQREGVWRHGADADVPTLRQYHFLQGVYGSSYQPEQVFRLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AITPIAHSVPQPPPLLQQQQREGVWRHGADADVPTLRQYHFLQGVYGSSYQPEQVFRLRE 370 380 390 400 410 420 hk0107 L : gi|620 L >>gi|74762534|sp|Q8N6W0|CELF5_HUMAN CUG-BP- and ETR-3-li (485 aa) initn: 2020 init1: 1993 opt: 2046 Z-score: 2105.4 bits: 398.8 E(): 1.3e-108 Smith-Waterman score: 2434; 93.687% identity (93.687% similar) in 396 aa overlap (13-383:1-396) 10 20 30 40 50 60 hk0107 RRRRRRLGPAPAMARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF :::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF 10 20 30 40 70 80 90 100 110 120 hk0107 VGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 VGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE 50 60 70 80 90 100 130 140 150 160 170 180 hk0107 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG 110 120 130 140 150 160 190 200 210 220 230 240 hk0107 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG 170 180 190 200 210 220 250 260 270 280 290 300 hk0107 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL 230 240 250 260 270 280 310 320 330 hk0107 PATPIAPASG-------------------------VVPFPGGHPALETVYANGLVPYPAQ :::::::::: ::::::::::::::::::::::::: gi|747 PATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVYANGLVPYPAQ 290 300 310 320 330 340 340 350 360 370 380 390 hk0107 SPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGVWRHGADADVPT :::::::::::::::::::::::::::::::::::::::::::::::: gi|747 SPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLP 350 360 370 380 390 400 400 410 420 hk0107 LRQYHFLQGVYGSSYQPEQVFRLREL gi|747 QEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGM 410 420 430 440 450 460 >>gi|12746396|gb|AAK07476.1|AF329266_1 CUG-BP and ETR-3 (481 aa) initn: 2019 init1: 1992 opt: 2045 Z-score: 2104.4 bits: 398.6 E(): 1.4e-108 Smith-Waterman score: 2433; 93.434% identity (93.687% similar) in 396 aa overlap (13-383:1-396) 10 20 30 40 50 60 hk0107 RRRRRRLGPAPAMARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF :::::::::::::::::::::::::::::::::::::::::::::::: gi|127 MARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF 10 20 30 40 70 80 90 100 110 120 hk0107 VGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 VGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE 50 60 70 80 90 100 130 140 150 160 170 180 hk0107 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG 110 120 130 140 150 160 190 200 210 220 230 240 hk0107 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG 170 180 190 200 210 220 250 260 270 280 290 300 hk0107 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|127 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL 230 240 250 260 270 280 310 320 330 hk0107 PATPIAPASG-------------------------VVPFPGGHPALETVYANGLVPYPAQ ::::.::::: ::::::::::::::::::::::::: gi|127 PATPVAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVYANGLVPYPAQ 290 300 310 320 330 340 340 350 360 370 380 390 hk0107 SPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGVWRHGADADVPT :::::::::::::::::::::::::::::::::::::::::::::::: gi|127 SPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLP 350 360 370 380 390 400 400 410 420 hk0107 LRQYHFLQGVYGSSYQPEQVFRLREL gi|127 QEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGM 410 420 430 440 450 460 >>gi|28839403|gb|AAH47522.1| BRUNOL5 protein [Homo sapie (402 aa) initn: 2170 init1: 1985 opt: 1999 Z-score: 2058.2 bits: 389.8 E(): 5.3e-106 Smith-Waterman score: 1999; 92.169% identity (94.880% similar) in 332 aa overlap (13-337:1-332) 10 20 30 40 50 60 hk0107 RRRRRRLGPAPAMARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF :::::::::::::::::::::::::::::::::::::::::::::::: gi|288 MARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLF 10 20 30 40 70 80 90 100 110 120 hk0107 VGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|288 VGQIPRHLDEKDLKPLLEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHE 50 60 70 80 90 100 130 140 150 160 170 180 hk0107 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|288 QKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRG 110 120 130 140 150 160 190 200 210 220 230 240 hk0107 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|288 PDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVG 170 180 190 200 210 220 250 260 270 280 290 300 hk0107 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|288 QLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGL 230 240 250 260 270 280 310 320 330 340 350 hk0107 PATPIAPASGV--VPFPGGH--PALETVYANGL---VPYPAQSPTVAETLHPAFSGVQQY ::::::::::. :. : :.: . .::. ::. .: gi|288 PATPIAPASGLHSPPLLGTTAVPGLVAPITNGFAGVVPFSRWAPCPGNRLCQWPCALPSS 290 300 310 320 330 340 360 370 380 390 400 410 hk0107 TAMYPTAAITPIAHSVPQPPPLLQQQQREGVWRHGADADVPTLRQYHFLQGVYGSSYQPE gi|288 EPDCGRDTASCLLRSPAVHSHVPHRGHHAHRAQRPPAAAPPAAAAARRSLETRS 350 360 370 380 390 400 >>gi|189339278|ref|NP_795928.2| bruno-like 5, RNA bindin (395 aa) initn: 2145 init1: 1694 opt: 1742 Z-score: 1794.4 bits: 340.9 E(): 2.7e-91 Smith-Waterman score: 2327; 89.646% identity (92.172% similar) in 396 aa overlap (51-421:1-395) 30 40 50 60 70 80 hk0107 ARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQF :::::::::::::::::: :.::::::::: gi|189 MKDLDAIKLFVGQIPRHLHEQDLKPLFEQF 10 20 30 90 100 110 120 130 140 hk0107 GRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSES ::::::::::::.::.:::::::::::::::::::::::::::::::::::::::::::: gi|189 GRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSES 40 50 60 70 80 90 150 160 170 180 190 200 hk0107 RGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQ 100 110 120 130 140 150 210 220 230 240 250 260 hk0107 AAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 AAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYA 160 170 180 190 200 210 270 280 290 300 310 hk0107 QALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASG---------- :::::::::::::::::::::::: ::::::::::::::::::::::::: gi|189 QALMQQQTTVLSTSGSYLSPGVAFPPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTA 220 230 240 250 260 270 320 330 340 350 hk0107 ---------------VVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTA :.::::.:::::::::::::::::::::::::::::::::::::: gi|189 AVPGLMAPIPNGFPGVLPFPGSHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTA 280 290 300 310 320 330 360 370 380 390 400 410 hk0107 MYPTAAITPIAHSVPQPPPLLQQQQREGVWRHGADADVPTLRQYHFLQGVYGSSYQPEQV :::::::.:.:::::::: ::::: :::::::::: ::: :::::.:::::::.:::::: gi|189 MYPTAAIAPVAHSVPQPPHLLQQQ-REGVWRHGADPDVPPLRQYHLLQGVYGSGYQPEQV 340 350 360 370 380 420 hk0107 FRLREL ::.::: gi|189 FRIREL 390 >>gi|152013396|sp|A0JM51|CELF5_XENTR CUG-BP- and ETR-3-l (486 aa) initn: 1202 init1: 818 opt: 1727 Z-score: 1777.7 bits: 338.2 E(): 2.3e-90 Smith-Waterman score: 1993; 77.363% identity (87.562% similar) in 402 aa overlap (13-383:1-397) 10 20 30 40 50 hk0107 RRRRRRLGPAPAMARLTESEARRQQQQ----LLQPRPSPVGSSGPEPPGGQPDGMKDLDA :::::: :::::::: ::: :. ::::::. : :.:::::: gi|152 MARLTEREARRQQQQHPPQQQQPRACPM--SGPEPPAQQSDSMKDLDA 10 20 30 40 60 70 80 90 100 110 hk0107 IKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQT ::::::::::.:.::::::::::::.::::::::: :::::::::::::::::::::::: gi|152 IKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQT 50 60 70 80 90 100 120 130 140 150 160 170 hk0107 ALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECT ::::::::::::::::::::::::::: :::::::::.::::::.: .:: :: :.::. gi|152 ALHEQKTLPGMARPIQVKPADSESRGG-DRKLFVGMLSKQQSEEEVTSMFQAFGSIEECS 110 120 130 140 150 160 180 190 200 210 220 230 hk0107 VLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQ ::::::::::::::::::::.::::::.:::::::::::::::::::::::::::::::: gi|152 VLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQ 170 180 190 200 210 220 240 250 260 270 280 290 hk0107 QMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTS-GSYLSPGVAFSPCHIQQIGAV ::::::::.::::.::.::::::::::::::::::::: ::::::.::: ::::::::: gi|152 QMVGQLGIFTPSLALPISPYSAYAQALMQQQTTVLSTSHGSYLSPSVAFPSCHIQQIGAV 230 240 250 260 270 280 300 310 320 330 hk0107 SLNGLPATPIAPASGV-------------------------VPFPGGHPALETVYANGLV .::::::.::.::::. ::::..::::.:.:.:..: gi|152 NLNGLPAAPITPASGLHSPPVIGTAAVPGLVAPLTNGFPGLVPFPSSHPALDTIYTNSIV 290 300 310 320 330 340 340 350 360 370 380 hk0107 PYPAQSPTVA-ETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGVWRHGA :::::::... :.:::.:.:::::.:.:::::.::..::.:::::.::: ::: gi|152 PYPAQSPALTVESLHPSFTGVQQYSAIYPTAALTPVTHSTPQPPPILQQ--REGPEGCNL 350 360 370 380 390 400 390 400 410 420 hk0107 DADVPTLRQYHFLQGVYGSSYQPEQVFRLREL gi|152 FIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMN 410 420 430 440 450 460 >>gi|109481517|ref|XP_001075513.1| PREDICTED: similar to (445 aa) initn: 1535 init1: 1083 opt: 1714 Z-score: 1764.9 bits: 335.7 E(): 1.2e-89 Smith-Waterman score: 2058; 89.106% identity (91.620% similar) in 358 aa overlap (51-383:1-356) 30 40 50 60 70 80 hk0107 ARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQF :::::::::::::::::: :.::::::::: gi|109 MKDLDAIKLFVGQIPRHLHEQDLKPLFEQF 10 20 30 90 100 110 120 130 140 hk0107 GRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSES ::::::::::::.::.:::::::::::::::::::::::::::::::::::::::::::. gi|109 GRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSEN 40 50 60 70 80 90 150 160 170 180 190 200 hk0107 RGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQ ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RGG-DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQ 100 110 120 130 140 210 220 230 240 250 260 hk0107 AAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYA 150 160 170 180 190 200 270 280 290 300 310 hk0107 QALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASG---------- :::::::::::::::::::::::: ::::::::.:::::::::::::::: gi|109 QALMQQQTTVLSTSGSYLSPGVAFPPCHIQQIGTVSLNGLPATPIAPASGLHSPPLLGTA 210 220 230 240 250 260 320 330 340 350 hk0107 ---------------VVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTA :.::::.:::::::::::::::::::::::::::::::::::::: gi|109 AVPGLMTSIPSGFPGVLPFPGSHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTA 270 280 290 300 310 320 360 370 380 390 400 410 hk0107 MYPTAAITPIAHSVPQPPPLLQQQQREGVWRHGADADVPTLRQYHFLQGVYGSSYQPEQV :::::::.:.:::::::: ::::: ::: gi|109 MYPTAAIAPVAHSVPQPPHLLQQQ-REGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIIS 330 340 350 360 370 380 >>gi|109480191|ref|XP_234928.4| PREDICTED: similar to br (703 aa) initn: 1535 init1: 1083 opt: 1714 Z-score: 1762.0 bits: 335.8 E(): 1.7e-89 Smith-Waterman score: 2058; 89.106% identity (91.620% similar) in 358 aa overlap (51-383:1-356) 30 40 50 60 70 80 hk0107 ARRQQQQLLQPRPSPVGSSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQF :::::::::::::::::: :.::::::::: gi|109 MKDLDAIKLFVGQIPRHLHEQDLKPLFEQF 10 20 30 90 100 110 120 130 140 hk0107 GRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSES ::::::::::::.::.:::::::::::::::::::::::::::::::::::::::::::. gi|109 GRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSEN 40 50 60 70 80 90 150 160 170 180 190 200 hk0107 RGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQ ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RGG-DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQ 100 110 120 130 140 210 220 230 240 250 260 hk0107 AAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYA 150 160 170 180 190 200 270 280 290 300 310 hk0107 QALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASG---------- :::::::::::::::::::::::: ::::::::.:::::::::::::::: gi|109 QALMQQQTTVLSTSGSYLSPGVAFPPCHIQQIGTVSLNGLPATPIAPASGLHSPPLLGTA 210 220 230 240 250 260 320 330 340 350 hk0107 ---------------VVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTA :.::::.:::::::::::::::::::::::::::::::::::::: gi|109 AVPGLMTSIPSGFPGVLPFPGSHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTA 270 280 290 300 310 320 360 370 380 390 400 410 hk0107 MYPTAAITPIAHSVPQPPPLLQQQQREGVWRHGADADVPTLRQYHFLQGVYGSSYQPEQV :::::::.:.:::::::: ::::: ::: gi|109 MYPTAAIAPVAHSVPQPPHLLQQQ-REGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIIS 330 340 350 360 370 380 >>gi|94732637|emb|CAK04399.1| novel protein similar to v (506 aa) initn: 1010 init1: 716 opt: 1468 Z-score: 1511.4 bits: 288.9 E(): 1.5e-75 Smith-Waterman score: 1691; 65.271% identity (84.236% similar) in 406 aa overlap (8-383:19-418) 10 20 30 40 hk0107 RRRRRRLGPAPAMARLTESEARRQQQQLLQPRPSPVGSSGPEPPGGQPD : ::.. : ..: :. : :.:. .: : . .:. gi|947 QHPQPPHPAYSSLLFTGPGAAPTQHPLLLIPHQHQYAQI--PFPKPM--NGSESISIHPE 10 20 30 40 50 50 60 70 80 90 100 hk0107 G--MKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCA . ::: ::::::.:::::.:.::::::::::::.:.::::::: ::::::::::::::: gi|947 NGTMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCA 60 70 80 90 100 110 110 120 130 140 150 160 hk0107 RDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQ :.::::::.:::::::::::.:::::::::::::: :::::::::::::.:::: :::. gi|947 RESAIKAQNALHEQKTLPGMTRPIQVKPADSESRG--DRKLFVGMLNKQQTEEDVYRLFE 120 130 140 150 160 170 170 180 190 200 210 220 hk0107 PFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTD :.:::.::::::::::.::::::::::.:.:::.:: ::::::::::::::::::::::: gi|947 PYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTD 180 190 200 210 220 230 230 240 250 260 270 280 hk0107 KERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTS-GSYLSPGVAFSP ::::.:::::::::.::..:...:::: ::.::.::::::......: :.::.:.::: gi|947 KERTIRRMQQMVGQFGIFNPAIALPFSTYSTYAHALMQQQAALMAASHGGYLAPSVAFPT 240 250 260 270 280 290 290 300 310 320 hk0107 CHIQQIGAVSLNGLPATPIAPASG----------------VVPF----------PGGHPA .:.:.::...:.:: ::..:.:: :.:. :.:::: gi|947 TQIHQMGALNINSLPPTPMTPVSGLSSPPANITTSAVPSIVTPIVNGFTSIPHQPNGHPA 300 310 320 330 340 350 330 340 350 360 370 380 hk0107 LETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQ .:.::.::: :: .::::.:.::. ::.:::::::.::....:::..:.:::: ..:::: gi|947 VEAVYTNGLPPYSTQSPTAADTLQQAFTGVQQYTAIYPATTLTPIGQSLPQPPQVIQQQQ 360 370 380 390 400 410 390 400 410 420 hk0107 -REGVWRHGADADVPTLRQYHFLQGVYGSSYQPEQVFRLREL ::: gi|947 QREGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPA 420 430 440 450 460 470 >>gi|194668831|ref|XP_610805.4| PREDICTED: similar to br (519 aa) initn: 1427 init1: 1400 opt: 1464 Z-score: 1507.1 bits: 288.2 E(): 2.7e-75 Smith-Waterman score: 1864; 79.016% identity (81.865% similar) in 386 aa overlap (26-383:59-430) 10 20 30 40 50 hk0107 RRRRRRLGPAPAMARLTESEARRQQQQLLQPRPSPVG-SSGPEPPGGQ-PDGMKD : :..: : : : . . : : :: . gi|194 GEQRAEYRDVCNGERKPVGGGRVNVTAASSQTLMSPTPLPRGWKVALAPARTQVPDVARA 30 40 50 60 70 80 60 70 80 90 100 110 hk0107 LD-AIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAI :. :: : .. : . :: :.. : : :::::::::::::: gi|194 LSRAIGLNINTRPAR-------------GR-SPLSLRPPPLRGPLYGCAFLTYCARDSAI 90 100 110 120 130 120 130 140 150 160 170 hk0107 KAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVI 140 150 160 170 180 190 180 190 200 210 220 230 hk0107 DECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTL 200 210 220 230 240 250 240 250 260 270 280 290 hk0107 RRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQI 260 270 280 290 300 310 300 310 320 hk0107 GAVSLNGLPATPIAPASG-------------------------VVPFPGGHPALETVYAN :::::::::::::::::: ::::::::::::::::: gi|194 GAVSLNGLPATPIAPASGLHSPPLLGTATVPGLVAPITNGFAGVVPFPGGHPALETVYAN 320 330 340 350 360 370 330 340 350 360 370 380 hk0107 GLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGVWRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPLLQQQQREGPEGC 380 390 400 410 420 430 390 400 410 420 hk0107 GADADVPTLRQYHFLQGVYGSSYQPEQVFRLREL gi|194 NLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQTAIQA 440 450 460 470 480 490 421 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 20:31:10 2008 done: Tue Aug 12 20:33:36 2008 Total Scan time: 829.440 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]