# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk01625.fasta.nr -Q hk01625.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk01625, 476 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6836876 sequences Expectation_n fit: rho(ln(x))= 6.1913+/-0.000196; mu= 7.7418+/- 0.011 mean_var=107.3369+/-20.305, 0's: 36 Z-trim: 63 B-trim: 68 in 1/66 Lambda= 0.123794 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087240|dbj|BAD92067.1| AT rich interactive do ( 476) 3183 578.9 8.4e-163 gi|194384932|dbj|BAG60872.1| unnamed protein produ ( 470) 2567 468.9 1.1e-129 gi|4185569|gb|AAD09133.1| bright and dead ringer g ( 560) 2567 468.9 1.3e-129 gi|152013359|sp|Q8IVW6|ARI3B_HUMAN AT-rich interac ( 561) 2567 468.9 1.3e-129 gi|194378530|dbj|BAG63430.1| unnamed protein produ ( 444) 2560 467.6 2.5e-129 gi|27469393|gb|AAH41792.1| AT rich interactive dom ( 562) 2555 466.8 5.5e-129 gi|114658087|ref|XP_529731.2| PREDICTED: AT rich i ( 667) 2508 458.5 2.1e-126 gi|109081894|ref|XP_001099559.1| PREDICTED: simila ( 574) 2503 457.5 3.5e-126 gi|109081896|ref|XP_001099349.1| PREDICTED: simila ( 538) 2359 431.8 1.8e-118 gi|149691780|ref|XP_001492933.1| PREDICTED: AT ric ( 565) 2300 421.3 2.9e-115 gi|74000735|ref|XP_544771.2| PREDICTED: similar to ( 560) 2237 410.0 6.9e-112 gi|119913828|ref|XP_871546.2| PREDICTED: similar t ( 553) 2174 398.7 1.7e-108 gi|81870092|sp|Q9Z1N7|ARI3B_MOUSE AT-rich interact ( 568) 2026 372.3 1.5e-100 gi|187956533|gb|AAI50756.1| AT rich interactive do ( 568) 2026 372.3 1.5e-100 gi|149041815|gb|EDL95656.1| AT rich interactive do ( 565) 1958 360.2 7e-97 gi|126272478|ref|XP_001379446.1| PREDICTED: simila ( 565) 1827 336.8 7.7e-90 gi|38174524|gb|AAH60824.1| ARID3B protein [Homo sa ( 253) 1577 291.9 1.1e-76 gi|29436842|gb|AAH49776.1| Arid3b protein [Mus mus ( 282) 1295 241.5 1.8e-61 gi|74228331|dbj|BAE24019.1| unnamed protein produc ( 287) 1287 240.1 4.9e-61 gi|149639133|ref|XP_001511823.1| PREDICTED: simila ( 346) 1163 218.0 2.6e-54 gi|74186993|dbj|BAE20530.1| unnamed protein produc ( 212) 1107 207.9 1.9e-51 gi|124297222|gb|AAI31868.1| Arid3b protein [Danio ( 537) 1051 198.2 3.9e-48 gi|109139386|ref|XP_001119517.1| PREDICTED: simila ( 160) 1041 196.0 5.3e-48 gi|76779566|gb|AAI06446.1| LOC733349 protein [Xeno ( 490) 960 181.9 2.8e-43 gi|47224488|emb|CAG08738.1| unnamed protein produc ( 762) 871 166.1 2.4e-38 gi|163915555|gb|AAI57423.1| Unknown (protein for I ( 376) 852 162.5 1.5e-37 gi|82180257|sp|Q5XGD9|ARI3A_XENTR AT-rich interact ( 541) 845 161.4 4.6e-37 gi|82184626|sp|Q6GQD7|ARI3A_XENLA AT-rich interact ( 539) 842 160.8 6.7e-37 gi|152013358|sp|A2BEA6|ARI3A_DANRE AT-rich interac ( 570) 838 160.1 1.1e-36 gi|194668546|ref|XP_588589.4| PREDICTED: similar t ( 591) 832 159.1 2.5e-36 gi|56799575|gb|AAW30734.1| DRIL3 [Homo sapiens] ( 589) 830 158.7 3.2e-36 gi|12230034|sp|Q99856.2|ARI3A_HUMAN AT-rich intera ( 593) 830 158.7 3.2e-36 gi|119589986|gb|EAW69580.1| AT rich interactive do ( 593) 830 158.7 3.2e-36 gi|25808791|gb|AAN74028.1| E2F binding protein [Ho ( 593) 830 158.7 3.2e-36 gi|38173800|gb|AAH60828.1| AT rich interactive dom ( 593) 829 158.6 3.6e-36 gi|73987586|ref|XP_855193.1| PREDICTED: similar to ( 562) 825 157.8 5.7e-36 gi|189524939|ref|XP_001921286.1| PREDICTED: simila ( 525) 824 157.6 6.1e-36 gi|21620048|gb|AAH33163.1| ARID3A protein [Homo sa ( 443) 816 156.1 1.4e-35 gi|109122688|ref|XP_001092793.1| PREDICTED: AT ric ( 589) 816 156.2 1.8e-35 gi|3399674|gb|AAC28918.1| DRIL1 DNA binding protei ( 363) 809 154.8 2.9e-35 gi|114674385|ref|XP_524501.2| PREDICTED: similar t ( 722) 808 154.9 5.6e-35 gi|126323677|ref|XP_001374625.1| PREDICTED: simila ( 627) 807 154.6 5.7e-35 gi|29747922|gb|AAH50925.1| AT rich interactive dom ( 599) 806 154.4 6.3e-35 gi|148699676|gb|EDL31623.1| AT rich interactive do ( 667) 806 154.5 6.8e-35 gi|12230032|sp|Q62431.1|ARI3A_MOUSE AT-rich intera ( 601) 805 154.3 7.1e-35 gi|189524937|ref|XP_691265.3| PREDICTED: similar t ( 332) 796 152.5 1.4e-34 gi|47211166|emb|CAF95993.1| unnamed protein produc ( 297) 795 152.2 1.4e-34 gi|122049754|sp|Q4H3P5|DRI_CIOIN Protein dead ring ( 571) 788 151.2 5.6e-34 gi|119578842|gb|EAW58438.1| AT rich interactive do ( 367) 766 147.1 6.1e-33 gi|126335024|ref|XP_001378753.1| PREDICTED: simila ( 457) 767 147.4 6.4e-33 >>gi|62087240|dbj|BAD92067.1| AT rich interactive domain (476 aa) initn: 3183 init1: 3183 opt: 3183 Z-score: 3078.0 bits: 578.9 E(): 8.4e-163 Smith-Waterman score: 3183; 100.000% identity (100.000% similar) in 476 aa overlap (1-476:1-476) 10 20 30 40 50 60 hk0162 AAASSAARKPGVPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AAASSAARKPGVPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPH 10 20 30 40 50 60 70 80 90 100 110 120 hk0162 LAPLQMDAREKQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LAPLQMDAREKQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVA 70 80 90 100 110 120 130 140 150 160 170 180 hk0162 QVFERGNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QVFERGNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSN 130 140 150 160 170 180 190 200 210 220 230 240 hk0162 LLPAPGLPPHGQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LLPAPGLPPHGQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRG 190 200 210 220 230 240 250 260 270 280 290 300 hk0162 REISRDFAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 REISRDFAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEK 250 260 270 280 290 300 310 320 330 340 350 360 hk0162 GGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAI 310 320 330 340 350 360 370 380 390 400 410 420 hk0162 DGNRREGRRPSYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DGNRREGRRPSYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPR 370 380 390 400 410 420 430 440 450 460 470 hk0162 ISPATTLRKGQQGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ISPATTLRKGQQGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ 430 440 450 460 470 >>gi|194384932|dbj|BAG60872.1| unnamed protein product [ (470 aa) initn: 2567 init1: 2567 opt: 2567 Z-score: 2483.5 bits: 468.9 E(): 1.1e-129 Smith-Waterman score: 2567; 100.000% identity (100.000% similar) in 389 aa overlap (42-430:1-389) 20 30 40 50 60 70 hk0162 VPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPHLAPLQMDAREK :::::::::::::::::::::::::::::: gi|194 MEPLQQQQQQQQQQQKQPHLAPLQMDAREK 10 20 30 80 90 100 110 120 130 hk0162 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE 40 50 60 70 80 90 140 150 160 170 180 190 hk0162 PEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG 100 110 120 130 140 150 200 210 220 230 240 250 hk0162 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY 160 170 180 190 200 210 260 270 280 290 300 310 hk0162 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 220 230 240 250 260 270 320 330 340 350 360 370 hk0162 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS 280 290 300 310 320 330 380 390 400 410 420 430 hk0162 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGD 340 350 360 370 380 390 440 450 460 470 hk0162 QGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ gi|194 GAPVTTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQ 400 410 420 430 440 450 >>gi|4185569|gb|AAD09133.1| bright and dead ringer gene (560 aa) initn: 2567 init1: 2567 opt: 2567 Z-score: 2482.4 bits: 468.9 E(): 1.3e-129 Smith-Waterman score: 2567; 100.000% identity (100.000% similar) in 389 aa overlap (42-430:1-389) 20 30 40 50 60 70 hk0162 VPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPHLAPLQMDAREK :::::::::::::::::::::::::::::: gi|418 MEPLQQQQQQQQQQQKQPHLAPLQMDAREK 10 20 30 80 90 100 110 120 130 hk0162 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE 40 50 60 70 80 90 140 150 160 170 180 190 hk0162 PEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 PEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG 100 110 120 130 140 150 200 210 220 230 240 250 hk0162 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY 160 170 180 190 200 210 260 270 280 290 300 310 hk0162 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 220 230 240 250 260 270 320 330 340 350 360 370 hk0162 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS 280 290 300 310 320 330 380 390 400 410 420 430 hk0162 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGD 340 350 360 370 380 390 440 450 460 470 hk0162 QGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ gi|418 GAPVTTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQ 400 410 420 430 440 450 >>gi|152013359|sp|Q8IVW6|ARI3B_HUMAN AT-rich interactive (561 aa) initn: 2567 init1: 2567 opt: 2567 Z-score: 2482.4 bits: 468.9 E(): 1.3e-129 Smith-Waterman score: 2567; 100.000% identity (100.000% similar) in 389 aa overlap (42-430:1-389) 20 30 40 50 60 70 hk0162 VPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPHLAPLQMDAREK :::::::::::::::::::::::::::::: gi|152 MEPLQQQQQQQQQQQKQPHLAPLQMDAREK 10 20 30 80 90 100 110 120 130 hk0162 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE 40 50 60 70 80 90 140 150 160 170 180 190 hk0162 PEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 PEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG 100 110 120 130 140 150 200 210 220 230 240 250 hk0162 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY 160 170 180 190 200 210 260 270 280 290 300 310 hk0162 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 220 230 240 250 260 270 320 330 340 350 360 370 hk0162 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS 280 290 300 310 320 330 380 390 400 410 420 430 hk0162 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGD 340 350 360 370 380 390 440 450 460 470 hk0162 QGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ gi|152 GAPVTTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQ 400 410 420 430 440 450 >>gi|194378530|dbj|BAG63430.1| unnamed protein product [ (444 aa) initn: 2560 init1: 2560 opt: 2560 Z-score: 2477.1 bits: 467.6 E(): 2.5e-129 Smith-Waterman score: 2560; 99.743% identity (99.743% similar) in 389 aa overlap (42-430:1-389) 20 30 40 50 60 70 hk0162 VPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPHLAPLQMDAREK :::::::::::::::::::::::::::::: gi|194 MEPLQQQQQQQQQQQKQPHLAPLQMDAREK 10 20 30 80 90 100 110 120 130 hk0162 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSE 40 50 60 70 80 90 140 150 160 170 180 190 hk0162 PEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PEEEDGGWEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHG 100 110 120 130 140 150 200 210 220 230 240 250 hk0162 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY 160 170 180 190 200 210 260 270 280 290 300 310 hk0162 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 220 230 240 250 260 270 320 330 340 350 360 370 hk0162 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPS 280 290 300 310 320 330 380 390 400 410 420 430 hk0162 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGD 340 350 360 370 380 390 440 450 460 470 hk0162 QGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ gi|194 GAPVTTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASGTWCQ 400 410 420 430 440 >>gi|27469393|gb|AAH41792.1| AT rich interactive domain (562 aa) initn: 2539 init1: 2539 opt: 2555 Z-score: 2470.8 bits: 466.8 E(): 5.5e-129 Smith-Waterman score: 2555; 99.744% identity (99.744% similar) in 390 aa overlap (42-430:1-390) 20 30 40 50 60 70 hk0162 VPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQ-KQPHLAPLQMDARE ::::::::::::::: :::::::::::::: gi|274 MEPLQQQQQQQQQQQQKQPHLAPLQMDARE 10 20 30 80 90 100 110 120 130 hk0162 KQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 KQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNS 40 50 60 70 80 90 140 150 160 170 180 190 hk0162 EPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 EPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPH 100 110 120 130 140 150 200 210 220 230 240 250 hk0162 GQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 GQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKL 160 170 180 190 200 210 260 270 280 290 300 310 hk0162 YELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 YELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKK 220 230 240 250 260 270 320 330 340 350 360 370 hk0162 IWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 IWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRP 280 290 300 310 320 330 380 390 400 410 420 430 hk0162 SYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|274 SYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKG 340 350 360 370 380 390 440 450 460 470 hk0162 QQGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ gi|274 DGAPVTTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLV 400 410 420 430 440 450 >>gi|114658087|ref|XP_529731.2| PREDICTED: AT rich inter (667 aa) initn: 2272 init1: 2272 opt: 2508 Z-score: 2424.4 bits: 458.5 E(): 2.1e-126 Smith-Waterman score: 2508; 99.221% identity (99.481% similar) in 385 aa overlap (46-430:113-495) 20 30 40 50 60 70 hk0162 GLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPHLAPLQMDAREKQGQQ :::::::::::::::::::::::::::::: gi|114 RRPKTRSAPHRFRPGVPGGLCPGSESCHSRQQQQQQQQQQQKQPHLAPLQMDAREKQGQQ 90 100 110 120 130 140 80 90 100 110 120 130 hk0162 MREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEE 150 160 170 180 190 200 140 150 160 170 180 190 hk0162 DGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHGQQAK ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|114 DGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVAHQDPRVAPMSNLLPAPGLPPHGQQAK 210 220 230 240 250 260 200 210 220 230 240 250 hk0162 EDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLYELDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLYELDG 270 280 290 300 310 320 260 270 280 290 300 310 hk0162 DPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREI 330 340 350 360 370 380 320 330 340 350 360 370 hk0162 TKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSS 390 400 410 420 430 440 380 390 400 410 420 430 hk0162 LFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGQQGSW ::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|114 LFGYSPAAATAAA--GAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGDGAPV 450 460 470 480 490 500 440 450 460 470 hk0162 GRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ gi|114 TTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQQAFQ 510 520 530 540 550 560 >>gi|109081894|ref|XP_001099559.1| PREDICTED: similar to (574 aa) initn: 2267 init1: 2267 opt: 2503 Z-score: 2420.5 bits: 457.5 E(): 3.5e-126 Smith-Waterman score: 2503; 96.692% identity (98.473% similar) in 393 aa overlap (39-430:10-402) 10 20 30 40 50 60 hk0162 KPGVPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQPHLAPLQMDA . ... ::::::::::::::::::::::: gi|109 MEPLQQQQQQQQQQQQQQQQQQQQQQQKQPHLAPLQMDA 10 20 30 70 80 90 100 110 120 hk0162 REKQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNM ::::::::::::::::::::::::::::: ::::::::::::::::::.::::::::::. gi|109 REKQGQQMREAQFLYAQKLVTQPTLLSATPGRPSGSTPLGPLARVPPTTAVAQVFERGNV 40 50 60 70 80 90 130 140 150 160 170 180 hk0162 NSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLP 100 110 120 130 140 150 190 200 210 220 230 240 hk0162 PHGQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFA ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|109 PHGQQAKEDHTKDASKAPPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFA 160 170 180 190 200 210 250 260 270 280 290 300 hk0162 KLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIIN 220 230 240 250 260 270 310 320 330 340 350 360 hk0162 KKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGR 280 290 300 310 320 330 370 380 390 400 410 420 hk0162 RPSYSSSLFGYSPAAATAAAAA-GAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTL :::::::::::::::::::::: :::::::::::::::::::::::.::::::::::::: gi|109 RPSYSSSLFGYSPAAATAAAAAAGAPALLSPPKIRFPILGLGSSSGSNTSSPRISPATTL 340 350 360 370 380 390 430 440 450 460 470 hk0162 RKGQQGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ ::: gi|109 RKGDGAPVTTVPVPNRLAVPVTLANQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQ 400 410 420 430 440 450 >>gi|109081896|ref|XP_001099349.1| PREDICTED: similar to (538 aa) initn: 2158 init1: 2123 opt: 2359 Z-score: 2281.9 bits: 431.8 E(): 1.8e-118 Smith-Waterman score: 2359; 98.361% identity (99.180% similar) in 366 aa overlap (66-430:1-366) 40 50 60 70 80 90 hk0162 VKLEAKMEPLQQQQQQQQQQQKQPHLAPLQMDAREKQGQQMREAQFLYAQKLVTQPTLLS :::::::::::::::::::::::::::::: gi|109 MDAREKQGQQMREAQFLYAQKLVTQPTLLS 10 20 30 100 110 120 130 140 150 hk0162 ATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEEDGGLEDEDGDDEVAEVAEKE :: ::::::::::::::::::.::::::::::.::::::::::::::::::::::::::: gi|109 ATPGRPSGSTPLGPLARVPPTTAVAQVFERGNVNSEPEEEDGGLEDEDGDDEVAEVAEKE 40 50 60 70 80 90 160 170 180 190 200 210 hk0162 TQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHGQQAKEDHTKDASKASPSVSTAGQP :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|109 TQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHGQQAKEDHTKDASKAPPSVSTAGQP 100 110 120 130 140 150 220 230 240 250 260 270 hk0162 NWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLFVFMQKRGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLFVFMQKRGT 160 170 180 190 200 210 280 290 300 310 320 330 hk0162 PINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQ 220 230 240 250 260 270 340 350 360 370 380 390 hk0162 YMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAAA-GAPA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|109 YMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAAAAGAPA 280 290 300 310 320 330 400 410 420 430 440 450 hk0162 LLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGQQGSWGRRKKGRKGCQFPVFKTGV :::::::::::::::::::.:::::::::::::::: gi|109 LLSPPKIRFPILGLGSSSGSNTSSPRISPATTLRKGDGAPVTTVPVPNRLAVPVTLANQQ 340 350 360 370 380 390 460 470 hk0162 LGQEGQLWIGPAPVPLQVMEPQ gi|109 AGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLVQQAFQRNFFTMARQLPMKIRINGR 400 410 420 430 440 450 >>gi|149691780|ref|XP_001492933.1| PREDICTED: AT rich in (565 aa) initn: 2022 init1: 2022 opt: 2300 Z-score: 2224.7 bits: 421.3 E(): 2.9e-115 Smith-Waterman score: 2300; 89.114% identity (95.443% similar) in 395 aa overlap (42-430:1-394) 20 30 40 50 60 hk0162 VPRTGLDPVCLVGCAQVQSHATLWVKLEAKMEPLQQQQQQQQQQQKQP------HLAPLQ ::: :::.:::::::. : ::: :: gi|149 MEPQQQQKQQQQQQQQPPPQPPPAHLAALQ 10 20 30 70 80 90 100 110 120 hk0162 MDAREKQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFER ::.::::::::::::::::::::.: ::.::: :.:::: :::::::: . ::..:::: gi|149 MDTREKQGQQMREAQFLYAQKLVSQQTLFSATPGKPSGSPALGPLARVPQAPAVTRVFER 40 50 60 70 80 90 130 140 150 160 170 180 hk0162 GNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAP ...:::::::.: ::::.:::::.::::::.::::::::.::.::::::.::.:.::::: gi|149 SSVNSEPEEEEGCLEDEEGDDEVTEVAEKEAQAASKYFHAQKLARQDPRAAPVSGLLPAP 100 110 120 130 140 150 190 200 210 220 230 240 hk0162 GLPPHGQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISR :::::::::::::::::::: ::::.::::.:::::::::::::::::::::.::::::: gi|149 GLPPHGQQAKEDHTKDASKAPPSVSAAGQPSWNLDEQLKQNGGLAWSDDADGSRGREISR 160 170 180 190 200 210 250 260 270 280 290 300 hk0162 DFAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DFAKLYELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVE 220 230 240 250 260 270 310 320 330 340 350 360 hk0162 IINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRR 280 290 300 310 320 330 370 380 390 400 410 420 hk0162 EGRRPSYSSSLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPAT ::::::::::::::::.::::::: ::::::::::::::::::::::::::::::::::: gi|149 EGRRPSYSSSLFGYSPTAATAAAA-GAPALLSPPKIRFPILGLGSSSGTNTSSPRISPAT 340 350 360 370 380 430 440 450 460 470 hk0162 TLRKGQQGSWGRRKKGRKGCQFPVFKTGVLGQEGQLWIGPAPVPLQVMEPQ ::::: gi|149 TLRKGDGVSVTTVPVPNRLAVPVALAGQQATTRTATLEQLRERLESGEPPEKKTSRLSEE 390 400 410 420 430 440 476 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 20:58:58 2008 done: Tue Aug 12 21:01:19 2008 Total Scan time: 870.830 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]