hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-21472267/chunk_1/iprscan-20080812-21472267.nocrc
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Query sequence: hk02176
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00870 trp: transient-receptor-potential calcium ch  1015.4   6.3e-303   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00870   1/1     119   847 ..     1   871 []  1015.4 6.3e-303

Alignments of top-scoring domains:
TIGR00870: domain 1 of 1, from 119 to 847: score 1015.4, E = 6.3e-303
                   *->RehifttrknrLygkldirkgveaeeielseeekaflpavergdvas
                      ++             l+i           +  ++a +++++r     
     hk02176   119    KP------------LLRI----------TARIWRACCSSCRRA---- 139  

                   vkrkleeaklvyklninwkkgCvdrlgrsaLlsaAieNenleLteLLlnl
                     r+        + + +    +   lg  +   a +  ++      +l l
     hk02176   140 --RSTSQ-----TTSSK----VAPALGSGRAP-ALACPDP------PLCL 171  

                   srtskylTDSeyqrgevGdaLLhaisleyvdavEailllllkaaresgpl
                   s            ++e+G+++L++++l+++d+++ ++ lll +ar++++l
     hk02176   172 S------------DPETGKTCLLKAMLNLHDGQNTTIPLLLEIARQTDSL 209  

                   sPlEqELrDDDelandqytseftpgiTaLhLAihrqnyeiVklLLerGAs
                   +          el+n++yt+++++g+TaLh+Ai+r+n+ +V+lL+e+GA+
     hk02176   210 K----------ELVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGAD 249  

                   VprPHDarangdefvPEDFKLtNKksqgvdslyhgespLnaaaclaspsi
                   V+    a+a+gd+f+         k++g++++y+ge+pL++aac+++  i
     hk02176   250 VQ----AAAHGDFFK---------KTKGRPGFYFGELPLSLAACTNQLGI 286  

                   vaLlsedPhQPAdiltadsLGNtllhllvmenEFkaEyeelstqmynfal
                   v++l+++++Q Adi+++ds+GNt+lh+lv++++++a++++++t+myn++l
     hk02176   287 VKFLLQNSWQTADISARDSVGNTVLHALVEVADNTADNTKFVTSMYNEIL 336  

                   slldklrdskeLEvIlNhqgltPlkLaakegkielfrlkLaIkYkg.lcr
                   +l++kl+++ +LE+ +N +g tPl+Laa  gki++++++L++++ +++cr
     hk02176   337 ILGAKLHPTLKLEELTNKKGMTPLALAAGTGKIGVLAYILQREIQEpECR 386  

                   .LqkKFvawpngqqllslywleeldgwrrkqsvlelivvfviglkfPels
                   +L++KF++w++g++++sly+l+++d+++++ svle+i+++++  ++P+++
     hk02176   387 hLSRKFTEWAYGPVHSSLYDLSCIDTCEKN-SVLEVIAYSSS--ETPNRH 433  

                   dmyliaPlskLgkfkwKpFikfifhsasylyfLyLliftsvayyrPlktL
                   dm+l++Pl++L+++kw++F+k+if++++++y+Ly++ift++ayyrP+  L
     hk02176   434 DMLLVEPLNRLLQDKWDRFVKRIFYFNFLVYCLYMIIFTMAAYYRPVDGL 483  

                   lnfkenrtdledqifrvrgleqtllemliltwvdglilseekliwlgGvf
                   ++fk ++t                        +d++++++e+l++lgGv+
     hk02176   484 PPFKMEKT------------------------GDYFRVTGEILSVLGGVY 509  

                   eyildlwnildfgmnsfylatfllrpfailfvtqaqayvdiyflvlrehw
                   +++++++++l++  +++ +++f++++++ lf+ q+       +++l +++
     hk02176   510 FFFRGIQYFLQR--RPSMKTLFVDSYSEMLFFLQS-------LFMLATVV 550  

                   lpfdptlieeaLfafAlvlSwlnLlYifrgnqhlGPlqimlgrMIlgDil
                   l+f+  ++++a+++f+l+l+w+n+lY++rg+q++G++++m+++MIl+D++
     hk02176   551 LYFSHLKEYVASMVFSLALGWTNMLYYTRGFQQMGIYAVMIEKMILRDLC 600  

                   rFlfiYavVLfaFacglnqLyqyydalklnecsNaTtlkphrcdidepek
                   rF+f+Y+v+Lf+F++++++L++++++++l+ +s   t +  r+ ++ p  
     hk02176   601 RFMFVYIVFLFGFSTAVVTLIEDGKNDSLPSES---TSHRWRGPACRPP- 646  

                   ACyignaystlfEtlqeLFwaiiGlvdLvsvnlknehkftefvglllfga
                         +y++l++t++eLF+++iG++dL    +++e++++++v+++l++a
     hk02176   647 ----DSSYNSLYSTCLELFKFTIGMGDL----EFTENYDFKAVFIILLLA 688  

                   YnviaiilLLNMLIAMMgntYqlIaeeaDeeWKfqraklwlsyereggKE
                   Y+++++ilLLNMLIA+Mg+t+++Ia+e++++WK+qra+++l++e+++   
     hk02176   689 YVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFL-- 736  

                   RLAtlppPfniipspksfvgdrlikliekklgkkrerwcrRveevnwttw
                      ++++ ++++++++++vg        +++gk+++rwc+Rv+evnwttw
     hk02176   737 ---KCMR-KAFRSGKLLQVG-------YTPDGKDDYRWCFRVDEVNWTTW 775  

                   erkaetlsedpgncervketlsfteqlvlllryqevmkrlikryVlaeqr
                   ++++++++edpgnce+vk+tlsf+  l++ +++++ +k+++ +++l+e++
     hk02176   776 NTNVGIINEDPGNCEGVKRTLSFS--LRSSRVSGRHWKNFALVPLLREAS 823  

                   prdsdegtteeeikelkqdisSlRfE<-*
                    rd  +  ++ e++ l+q  +Sl++E   
     hk02176   824 ARD--RQSAQPEEVYLRQFSGSLKPE    847  

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