# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk03782.fasta.nr -Q hk03782.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk03782, 1186 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6835593 sequences Expectation_n fit: rho(ln(x))= 4.9385+/-0.000183; mu= 15.5718+/- 0.010 mean_var=70.4993+/-13.738, 0's: 33 Z-trim: 98 B-trim: 0 in 0/65 Lambda= 0.152750 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|109074756|ref|XP_001083325.1| PREDICTED: DNA di (1235) 7928 1757.2 0 gi|401012|sp|P30876.1|RPB2_HUMAN DNA-directed RNA (1174) 7858 1741.8 0 gi|194209129|ref|XP_001916826.1| PREDICTED: simila (1174) 7854 1740.9 0 gi|148744083|gb|AAI42268.1| POLR2B protein [Bos ta (1174) 7853 1740.7 0 gi|51702009|sp|Q8CFI7.2|RPB2_MOUSE DNA-directed RN (1174) 7852 1740.5 0 gi|126331583|ref|XP_001362455.1| PREDICTED: simila (1174) 7846 1739.2 0 gi|73975073|ref|XP_860930.1| PREDICTED: similar to (1180) 7831 1735.9 0 gi|73975079|ref|XP_861018.1| PREDICTED: similar to (1173) 7826 1734.7 0 gi|53127025|emb|CAG31004.1| hypothetical protein [ (1174) 7812 1731.7 0 gi|73975077|ref|XP_860990.1| PREDICTED: similar to (1179) 7804 1729.9 0 gi|23512288|gb|AAH38472.1| Polymerase (RNA) II (DN (1167) 7802 1729.5 0 gi|73975069|ref|XP_860865.1| PREDICTED: similar to (1180) 7796 1728.1 0 gi|73975071|ref|XP_860899.1| PREDICTED: similar to (1174) 7794 1727.7 0 gi|73975075|ref|XP_860963.1| PREDICTED: similar to (1175) 7793 1727.5 0 gi|194379208|dbj|BAG58155.1| unnamed protein produ (1167) 7790 1726.8 0 gi|73975067|ref|XP_860838.1| PREDICTED: similar to (1166) 7699 1706.8 0 gi|73975063|ref|XP_860777.1| PREDICTED: similar to (1173) 7638 1693.3 0 gi|114594588|ref|XP_001136218.1| PREDICTED: DNA di (1099) 7299 1618.6 0 gi|73975081|ref|XP_861044.1| PREDICTED: similar to (1099) 7294 1617.5 0 gi|194378878|dbj|BAG57990.1| unnamed protein produ (1099) 7291 1616.8 0 gi|91090964|ref|XP_974653.1| PREDICTED: similar to (1175) 7066 1567.3 0 gi|194386684|dbj|BAG61152.1| unnamed protein produ (1083) 7065 1567.0 0 gi|156215949|gb|EDO36897.1| predicted protein [Nem (1182) 6993 1551.2 0 gi|157017504|gb|EAA08858.3| AGAP003648-PA [Anophel (1175) 6949 1541.5 0 gi|190628505|gb|EDV44029.1| GF16238 [Drosophila an (1176) 6947 1541.0 0 gi|167866385|gb|EDS29768.1| DNA-directed RNA polym (1176) 6945 1540.6 0 gi|194166758|gb|EDW81659.1| GK12191 [Drosophila wi (1176) 6940 1539.5 0 gi|54638427|gb|EAL27829.1| GA16485-PA [Drosophila (1175) 6938 1539.1 0 gi|194102563|gb|EDW24606.1| GL24239 [Drosophila pe (1176) 6938 1539.1 0 gi|190651591|gb|EDV48846.1| GG16840 [Drosophila er (1176) 6934 1538.2 0 gi|12644108|sp|P08266|RPB2_DROME DNA-directed RNA (1176) 6932 1537.7 0 gi|194184008|gb|EDW97619.1| GE24221 [Drosophila ya (1176) 6932 1537.7 0 gi|193916095|gb|EDW14962.1| GI23040 [Drosophila mo (1176) 6931 1537.5 0 gi|194152856|gb|EDW68290.1| RNA polymerase II 140k (1176) 6925 1536.2 0 gi|194199414|gb|EDX12990.1| GD18948 [Drosophila si (1176) 6924 1536.0 0 gi|193892751|gb|EDV91617.1| GH19704 [Drosophila gr (1175) 6913 1533.5 0 gi|156538773|ref|XP_001607902.1| PREDICTED: simila (1175) 6910 1532.9 0 gi|5514652|emb|CAA29180.2| RNA polymerase [Drosoph (1123) 6638 1472.9 0 gi|187025225|emb|CAP35692.1| C. briggsae CBR-RPB-2 (1194) 6453 1432.2 0 gi|2507348|sp|Q10578|RPB2_CAEEL DNA-directed RNA p (1193) 6439 1429.1 0 gi|193713801|ref|XP_001948275.1| PREDICTED: simila (1101) 6166 1368.9 0 gi|73975057|ref|XP_860670.1| PREDICTED: similar to ( 932) 6128 1360.5 0 gi|38014674|gb|AAH60458.1| MGC68569 protein [Xenop ( 949) 6104 1355.2 0 gi|47208444|emb|CAF93098.1| unnamed protein produc (1217) 5826 1294.0 0 gi|73975059|ref|XP_860708.1| PREDICTED: similar to (1162) 5767 1281.0 0 gi|149602544|ref|XP_001521110.1| PREDICTED: simila ( 951) 5543 1231.6 0 gi|158592174|gb|EDP30776.1| DNA-directed RNA polym (1185) 5345 1188.0 0 gi|108710089|gb|ABF97884.1| DNA-directed RNA polym (1222) 5324 1183.4 0 gi|70794966|gb|AAZ08457.1| RNA polymerase II secon (1191) 5314 1181.2 0 gi|162682334|gb|EDQ68753.1| predicted protein [Phy (1185) 5309 1180.1 0 >>gi|109074756|ref|XP_001083325.1| PREDICTED: DNA direct (1235 aa) initn: 7928 init1: 7928 opt: 7928 Z-score: 9431.7 bits: 1757.2 E(): 0 Smith-Waterman score: 7928; 100.000% identity (100.000% similar) in 1184 aa overlap (3-1186:52-1235) 10 20 30 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPD :::::::::::::::::::::::::::::: gi|109 CAILGTSETEVTWSLAPGAGGFCALFVFDFELGAREPFGNMYDADEDMQYDEDDDEITPD 30 40 50 60 70 80 40 50 60 70 80 90 hk0378 LWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHASGEVEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHASGEVEE 90 100 110 120 130 140 100 110 120 130 140 150 hk0378 PPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTVIKEGEEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTVIKEGEEQL 150 160 170 180 190 200 160 170 180 190 200 210 hk0378 QTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEKM 210 220 230 240 250 260 220 230 240 250 260 270 hk0378 ATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATL 270 280 290 300 310 320 280 290 300 310 320 330 hk0378 PYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNF 330 340 350 360 370 380 340 350 360 370 380 390 hk0378 IGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRR 390 400 410 420 430 440 400 410 420 430 440 450 hk0378 ELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRII 450 460 470 480 490 500 460 470 480 490 500 510 hk0378 SDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQ 510 520 530 540 550 560 520 530 540 550 560 570 hk0378 LHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAA 570 580 590 600 610 620 580 590 600 610 620 630 hk0378 IADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGR 630 640 650 660 670 680 640 650 660 670 680 690 hk0378 ICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPD 690 700 710 720 730 740 700 710 720 730 740 750 hk0378 DLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNF 750 760 770 780 790 800 760 770 780 790 800 810 hk0378 HVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSA 810 820 830 840 850 860 820 830 840 850 860 870 hk0378 VDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRV 870 880 890 900 910 920 880 890 900 910 920 930 hk0378 SGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCK 930 940 950 960 970 980 940 950 960 970 980 990 hk0378 IRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGH 990 1000 1010 1020 1030 1040 1000 1010 1020 1030 1040 1050 hk0378 LIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQ 1050 1060 1070 1080 1090 1100 1060 1070 1080 1090 1100 1110 hk0378 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1110 1120 1130 1140 1150 1160 1120 1130 1140 1150 1160 1170 hk0378 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1170 1180 1190 1200 1210 1220 1180 hk0378 ELMSMSIAPRMMSV :::::::::::::: gi|109 ELMSMSIAPRMMSV 1230 >>gi|401012|sp|P30876.1|RPB2_HUMAN DNA-directed RNA poly (1174 aa) initn: 7858 init1: 7858 opt: 7858 Z-score: 9348.7 bits: 1741.8 E(): 0 Smith-Waterman score: 7858; 100.000% identity (100.000% similar) in 1174 aa overlap (13-1186:1-1174) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|401 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 720 hk0378 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA 650 660 670 680 690 700 730 740 750 760 770 780 hk0378 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR 710 720 730 740 750 760 790 800 810 820 830 840 hk0378 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV 770 780 790 800 810 820 850 860 870 880 890 900 hk0378 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT 830 840 850 860 870 880 910 920 930 940 950 960 hk0378 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ 890 900 910 920 930 940 970 980 990 1000 1010 1020 hk0378 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 hk0378 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 hk0378 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|401 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 hk0378 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::: gi|401 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 >>gi|194209129|ref|XP_001916826.1| PREDICTED: similar to (1174 aa) initn: 7854 init1: 7854 opt: 7854 Z-score: 9343.9 bits: 1740.9 E(): 0 Smith-Waterman score: 7854; 99.915% identity (100.000% similar) in 1174 aa overlap (13-1186:1-1174) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|194 KNLLKEVRIYAQKFIDRGKDFNLQLAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 720 hk0378 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA 650 660 670 680 690 700 730 740 750 760 770 780 hk0378 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR 710 720 730 740 750 760 790 800 810 820 830 840 hk0378 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV 770 780 790 800 810 820 850 860 870 880 890 900 hk0378 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT 830 840 850 860 870 880 910 920 930 940 950 960 hk0378 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ 890 900 910 920 930 940 970 980 990 1000 1010 1020 hk0378 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 hk0378 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 hk0378 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 hk0378 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::: gi|194 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 >>gi|148744083|gb|AAI42268.1| POLR2B protein [Bos taurus (1174 aa) initn: 7853 init1: 7853 opt: 7853 Z-score: 9342.7 bits: 1740.7 E(): 0 Smith-Waterman score: 7853; 99.915% identity (100.000% similar) in 1174 aa overlap (13-1186:1-1174) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 720 hk0378 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA 650 660 670 680 690 700 730 740 750 760 770 780 hk0378 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR 710 720 730 740 750 760 790 800 810 820 830 840 hk0378 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV 770 780 790 800 810 820 850 860 870 880 890 900 hk0378 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|148 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYT 830 840 850 860 870 880 910 920 930 940 950 960 hk0378 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ 890 900 910 920 930 940 970 980 990 1000 1010 1020 hk0378 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 hk0378 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 hk0378 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 hk0378 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::: gi|148 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 >>gi|51702009|sp|Q8CFI7.2|RPB2_MOUSE DNA-directed RNA po (1174 aa) initn: 7852 init1: 7852 opt: 7852 Z-score: 9341.5 bits: 1740.5 E(): 0 Smith-Waterman score: 7852; 99.915% identity (100.000% similar) in 1174 aa overlap (13-1186:1-1174) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|517 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 720 hk0378 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA 650 660 670 680 690 700 730 740 750 760 770 780 hk0378 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR 710 720 730 740 750 760 790 800 810 820 830 840 hk0378 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV 770 780 790 800 810 820 850 860 870 880 890 900 hk0378 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|517 FEKPTRETCQGMRHAIYEKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT 830 840 850 860 870 880 910 920 930 940 950 960 hk0378 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ 890 900 910 920 930 940 970 980 990 1000 1010 1020 hk0378 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 hk0378 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 hk0378 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 hk0378 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::: gi|517 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 >>gi|126331583|ref|XP_001362455.1| PREDICTED: similar to (1174 aa) initn: 7846 init1: 7846 opt: 7846 Z-score: 9334.4 bits: 1739.2 E(): 0 Smith-Waterman score: 7846; 99.830% identity (99.915% similar) in 1174 aa overlap (13-1186:1-1174) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|126 EFIQMSVQRIVEDAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 720 hk0378 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|126 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCA 650 660 670 680 690 700 730 740 750 760 770 780 hk0378 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR 710 720 730 740 750 760 790 800 810 820 830 840 hk0378 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV 770 780 790 800 810 820 850 860 870 880 890 900 hk0378 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT 830 840 850 860 870 880 910 920 930 940 950 960 hk0378 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ 890 900 910 920 930 940 970 980 990 1000 1010 1020 hk0378 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 hk0378 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 hk0378 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 hk0378 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::: gi|126 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 >>gi|73975073|ref|XP_860930.1| PREDICTED: similar to DNA (1180 aa) initn: 4331 init1: 4331 opt: 7831 Z-score: 9316.5 bits: 1735.9 E(): 0 Smith-Waterman score: 7831; 99.407% identity (99.492% similar) in 1180 aa overlap (13-1186:1-1180) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 hk0378 NNYS------WQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSM :::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NNYSEFFFFSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSM 650 660 670 680 690 700 720 730 740 750 760 770 hk0378 ILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTR 710 720 730 740 750 760 780 790 800 810 820 830 hk0378 SMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKG 770 780 790 800 810 820 840 850 860 870 880 890 hk0378 FDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|739 FDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEG 830 840 850 860 870 880 900 910 920 930 940 950 hk0378 TNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQK 890 900 910 920 930 940 960 970 980 990 1000 1010 hk0378 GTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPF 950 960 970 980 990 1000 1020 1030 1040 1050 1060 1070 hk0378 NDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSR 1010 1020 1030 1040 1050 1060 1080 1090 1100 1110 1120 1130 hk0378 ARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLC 1070 1080 1090 1100 1110 1120 1140 1150 1160 1170 1180 hk0378 GIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 1180 >>gi|73975079|ref|XP_861018.1| PREDICTED: similar to DNA (1173 aa) initn: 3980 init1: 3980 opt: 7826 Z-score: 9310.6 bits: 1734.7 E(): 0 Smith-Waterman score: 7826; 99.659% identity (99.830% similar) in 1174 aa overlap (13-1186:1-1173) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY ::::::::: .:::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KLRRQMDII-PDVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 720 hk0378 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA 650 660 670 680 690 700 730 740 750 760 770 780 hk0378 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR 710 720 730 740 750 760 790 800 810 820 830 840 hk0378 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV 770 780 790 800 810 820 850 860 870 880 890 900 hk0378 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYT 830 840 850 860 870 880 910 920 930 940 950 960 hk0378 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ 890 900 910 920 930 940 970 980 990 1000 1010 1020 hk0378 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 hk0378 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 hk0378 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 hk0378 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::: gi|739 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 >>gi|53127025|emb|CAG31004.1| hypothetical protein [Gall (1174 aa) initn: 7812 init1: 7812 opt: 7812 Z-score: 9293.9 bits: 1731.7 E(): 0 Smith-Waterman score: 7812; 99.404% identity (99.830% similar) in 1174 aa overlap (13-1186:1-1174) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD ::::::::::::::::::::::::: ::::::::::.::::::::::: gi|531 MYDADEDMQYDEDDDEITPDLWQEARWIVISSYFDEEGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|531 EFIQMSVQRIVEDAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|531 MPNEARLRNLTYSAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 720 hk0378 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCA ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|531 NNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCA 650 660 670 680 690 700 730 740 750 760 770 780 hk0378 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 SIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR 710 720 730 740 750 760 790 800 810 820 830 840 hk0378 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEV ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|531 FRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEV 770 780 790 800 810 820 850 860 870 880 890 900 hk0378 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|531 FEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFT 830 840 850 860 870 880 910 920 930 940 950 960 hk0378 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 KRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQ 890 900 910 920 930 940 970 980 990 1000 1010 1020 hk0378 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 YRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNV 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 hk0378 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 QKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQ 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 hk0378 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 ILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIA 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 hk0378 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::: gi|531 NTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 >>gi|73975077|ref|XP_860990.1| PREDICTED: similar to DNA (1179 aa) initn: 7497 init1: 3980 opt: 7804 Z-score: 9284.3 bits: 1729.9 E(): 0 Smith-Waterman score: 7804; 99.153% identity (99.322% similar) in 1180 aa overlap (13-1186:1-1179) 10 20 30 40 50 60 hk0378 FQELGAREPFGNMYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFD 10 20 30 40 70 80 90 100 110 120 hk0378 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPM 50 60 70 80 90 100 130 140 150 160 170 180 hk0378 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTD 110 120 130 140 150 160 190 200 210 220 230 240 hk0378 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENS 170 180 190 200 210 220 250 260 270 280 290 300 hk0378 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHI 230 240 250 260 270 280 310 320 330 340 350 360 hk0378 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEML 290 300 310 320 330 340 370 380 390 400 410 420 hk0378 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMF 350 360 370 380 390 400 430 440 450 460 470 480 hk0378 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQ 410 420 430 440 450 460 490 500 510 520 530 540 hk0378 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLAL 470 480 490 500 510 520 550 560 570 580 590 600 hk0378 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLR 530 540 550 560 570 580 610 620 630 640 650 660 hk0378 KLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY ::::::::: .:::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KLRRQMDII-PDVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREY 590 600 610 620 630 640 670 680 690 700 710 hk0378 NNYS------WQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSM :::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NNYSEFFFFSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSM 650 660 670 680 690 700 720 730 740 750 760 770 hk0378 ILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTR 710 720 730 740 750 760 780 790 800 810 820 830 hk0378 SMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKG 770 780 790 800 810 820 840 850 860 870 880 890 hk0378 FDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|739 FDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEG 830 840 850 860 870 880 900 910 920 930 940 950 hk0378 TNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQK 890 900 910 920 930 940 960 970 980 990 1000 1010 hk0378 GTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPF 950 960 970 980 990 1000 1020 1030 1040 1050 1060 1070 hk0378 NDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSR 1010 1020 1030 1040 1050 1060 1080 1090 1100 1110 1120 1130 hk0378 ARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLC 1070 1080 1090 1100 1110 1120 1140 1150 1160 1170 1180 hk0378 GIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV 1130 1140 1150 1160 1170 1186 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 22:34:24 2008 done: Tue Aug 12 22:36:37 2008 Total Scan time: 1132.480 Total Display time: 0.890 Function used was FASTA [version 34.26.5 April 26, 2007]