# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk04051.fasta.nr -Q hk04051.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk04051, 247 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6831431 sequences Expectation_n fit: rho(ln(x))= 5.3207+/-0.000188; mu= 8.4838+/- 0.011 mean_var=79.4495+/-15.737, 0's: 34 Z-trim: 133 B-trim: 2197 in 1/64 Lambda= 0.143889 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|13633613|sp|Q9UL25.3|RAB21_HUMAN Ras-related pr ( 225) 1496 319.4 2.7e-85 gi|114645863|ref|XP_522469.2| PREDICTED: similar t ( 224) 1476 315.3 4.8e-84 gi|2500067|sp|P55745|RAB21_CANFA Ras-related prote ( 223) 1464 312.8 2.7e-83 gi|109097798|ref|XP_001117520.1| PREDICTED: simila ( 223) 1458 311.5 6.3e-83 gi|122144675|sp|Q17R06|RAB21_BOVIN Ras-related pro ( 222) 1438 307.4 1.1e-81 gi|194037756|ref|XP_001925094.1| PREDICTED: simila ( 222) 1433 306.3 2.3e-81 gi|81884468|sp|Q6AXT5.1|RAB21_RAT Ras-related prot ( 223) 1425 304.7 7.3e-81 gi|46577689|sp|P35282|RAB21_MOUSE Ras-related prot ( 222) 1418 303.2 2e-80 gi|126339429|ref|XP_001370428.1| PREDICTED: simila ( 227) 1416 302.8 2.7e-80 gi|118082329|ref|XP_001233648.1| PREDICTED: simila ( 220) 1381 295.5 4.1e-78 gi|38014530|gb|AAH60498.1| MGC68816 protein [Xenop ( 221) 1371 293.4 1.7e-77 gi|89266851|emb|CAJ82566.1| RAB21, member RAS onco ( 221) 1371 293.4 1.7e-77 gi|115313619|gb|AAI24523.1| Zgc:154045 [Danio reri ( 216) 1295 277.7 9.5e-73 gi|47212281|emb|CAF89513.1| unnamed protein produc ( 217) 1270 272.5 3.5e-71 gi|149743106|ref|XP_001490458.1| PREDICTED: simila ( 181) 1135 244.4 8.3e-63 gi|73535741|pdb|1YZT|A Chain A, Gppnhp-Bound Rab21 ( 184) 1109 239.0 3.5e-61 gi|73535743|pdb|1YZU|A Chain A, Gppnhp-Bound Rab21 ( 170) 1108 238.8 3.8e-61 gi|73535747|pdb|1Z08|A Chain A, Gppnhp-Bound Rab21 ( 170) 1099 236.9 1.4e-60 gi|190579637|gb|EDV19728.1| hypothetical protein T ( 209) 1020 220.6 1.4e-55 gi|156213990|gb|EDO34991.1| predicted protein [Nem ( 216) 1015 219.5 3e-55 gi|149898836|gb|ABR27886.1| Ras-related small GTPa ( 218) 979 212.1 5.3e-53 gi|156547415|ref|XP_001604485.1| PREDICTED: simila ( 222) 972 210.6 1.5e-52 gi|193654889|ref|XP_001948825.1| PREDICTED: simila ( 226) 972 210.6 1.5e-52 gi|91078236|ref|XP_966494.1| PREDICTED: similar to ( 216) 930 201.9 6.1e-50 gi|30580479|sp|Q8WQ53|RAB21_GEOCY Ras-related prot ( 229) 891 193.8 1.7e-47 gi|89258431|gb|ABD65439.1| Rab21 [Suberites domunc ( 222) 857 186.8 2.3e-45 gi|66548006|ref|XP_393353.2| PREDICTED: similar to ( 222) 845 184.3 1.3e-44 gi|304604|gb|AAC37383.1| RabB gi|739977|prf||2 ( 213) 844 184.0 1.4e-44 gi|166208512|sp|P34142.2|RAB21_DICDI Ras-related p ( 212) 833 181.8 6.9e-44 gi|72132814|ref|XP_793125.1| PREDICTED: similar to ( 180) 788 172.4 4e-41 gi|190617160|gb|EDV32684.1| GF22152 [Drosophila an ( 225) 740 162.5 4.7e-38 gi|158596123|gb|EDP34522.1| ras-related protein Ra ( 219) 737 161.8 7.1e-38 gi|193908415|gb|EDW07282.1| GI14949 [Drosophila mo ( 222) 737 161.8 7.2e-38 gi|194149713|gb|EDW65404.1| GJ18919 [Drosophila vi ( 229) 737 161.9 7.3e-38 gi|162682061|gb|EDQ68482.1| Rab21-family small GTP ( 222) 736 161.6 8.3e-38 gi|21429138|gb|AAM50288.1| RE42508p [Drosophila me ( 222) 730 160.4 2e-37 gi|190650402|gb|EDV47680.1| GG17497 [Drosophila er ( 222) 729 160.2 2.3e-37 gi|194189572|gb|EDX03156.1| GE15254 [Drosophila ya ( 222) 728 160.0 2.6e-37 gi|194104976|gb|EDW27019.1| GL16463 [Drosophila pe ( 223) 728 160.0 2.6e-37 gi|194129619|gb|EDW51662.1| GM10050 [Drosophila se ( 224) 728 160.0 2.6e-37 gi|113193645|gb|EAA46055.2| CG17515-PB, isoform B ( 273) 728 160.0 3.1e-37 gi|193901559|gb|EDW00426.1| GH12858 [Drosophila gr ( 229) 727 159.8 3.1e-37 gi|194160261|gb|EDW75162.1| GK20025 [Drosophila wi ( 230) 723 158.9 5.5e-37 gi|187036824|emb|CAP23489.1| C. briggsae CBR-RAB-2 ( 206) 715 157.2 1.6e-36 gi|162685267|gb|EDQ71663.1| Rab21-family small GTP ( 208) 711 156.4 2.9e-36 gi|3879231|emb|CAA91296.1| C. elegans protein T01B ( 207) 708 155.8 4.4e-36 gi|194160896|gb|EDW75797.1| GK15003 [Drosophila wi ( 223) 704 155.0 8.3e-36 gi|119920369|ref|XP_001249324.1| PREDICTED: hypoth ( 106) 693 152.5 2.3e-35 gi|125551885|gb|EAY97594.1| hypothetical protein O ( 210) 688 151.6 7.9e-35 gi|54291745|gb|AAV32114.1| unknown protein [Oryza ( 212) 688 151.7 8e-35 >>gi|13633613|sp|Q9UL25.3|RAB21_HUMAN Ras-related protei (225 aa) initn: 1496 init1: 1496 opt: 1496 Z-score: 1686.5 bits: 319.4 E(): 2.7e-85 Smith-Waterman score: 1496; 100.000% identity (100.000% similar) in 225 aa overlap (23-247:1-225) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR :::::::::::::::::::::::::::::::::::::: gi|136 MAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG 160 170 180 190 200 210 hk0405 GGCCSSG ::::::: gi|136 GGCCSSG 220 >>gi|114645863|ref|XP_522469.2| PREDICTED: similar to GT (224 aa) initn: 1476 init1: 1476 opt: 1476 Z-score: 1664.1 bits: 315.3 E(): 4.8e-84 Smith-Waterman score: 1476; 99.552% identity (100.000% similar) in 223 aa overlap (25-247:2-224) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR ::.::::::::::::::::::::::::::::::::: gi|114 MAAAGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG 160 170 180 190 200 210 hk0405 GGCCSSG ::::::: gi|114 GGCCSSG 220 >>gi|2500067|sp|P55745|RAB21_CANFA Ras-related protein R (223 aa) initn: 1445 init1: 1445 opt: 1464 Z-score: 1650.7 bits: 312.8 E(): 2.7e-83 Smith-Waterman score: 1464; 98.222% identity (99.111% similar) in 225 aa overlap (23-247:1-223) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR :::::::::::: :::::::::::::::::::::::: gi|250 MAAAGGGGGGAA--GRAYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::.:: gi|250 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEPQAQSSG 160 170 180 190 200 210 hk0405 GGCCSSG ::::::: gi|250 GGCCSSG 220 >>gi|109097798|ref|XP_001117520.1| PREDICTED: similar to (223 aa) initn: 1455 init1: 1455 opt: 1458 Z-score: 1643.9 bits: 311.5 E(): 6.3e-83 Smith-Waterman score: 1458; 98.667% identity (99.111% similar) in 225 aa overlap (23-247:1-223) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR ::::::.: :::::::::::::::::::::::::::: gi|109 MAAAGGSG--AAAAGRAYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG 160 170 180 190 200 210 hk0405 GGCCSSG ::::::: gi|109 GGCCSSG 220 >>gi|122144675|sp|Q17R06|RAB21_BOVIN Ras-related protein (222 aa) initn: 1424 init1: 1424 opt: 1438 Z-score: 1621.5 bits: 307.4 E(): 1.1e-81 Smith-Waterman score: 1438; 96.444% identity (98.222% similar) in 225 aa overlap (23-247:1-222) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR :::::::: :::::.::::::::::::::::::::: gi|122 MAAAGGGG---AAAGRTYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|122 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::. : gi|122 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEPQAQSVG 160 170 180 190 200 210 hk0405 GGCCSSG ::::::: gi|122 GGCCSSG 220 >>gi|194037756|ref|XP_001925094.1| PREDICTED: similar to (222 aa) initn: 1419 init1: 1419 opt: 1433 Z-score: 1615.9 bits: 306.3 E(): 2.3e-81 Smith-Waterman score: 1433; 96.444% identity (98.667% similar) in 225 aa overlap (23-247:1-222) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR :::::::: :::.::::::::::::::::::::::: gi|194 MAAAGGGG---AAAARAYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG :::::::::::::::::::::::::::::::::::::::::..::::::::::::::..: gi|194 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGATRRGVQIIDDEPQAQSGG 160 170 180 190 200 210 hk0405 GGCCSSG ::::::: gi|194 GGCCSSG 220 >>gi|81884468|sp|Q6AXT5.1|RAB21_RAT Ras-related protein (223 aa) initn: 1422 init1: 1422 opt: 1425 Z-score: 1606.9 bits: 304.7 E(): 7.3e-81 Smith-Waterman score: 1425; 96.000% identity (98.667% similar) in 225 aa overlap (23-247:1-223) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR :::::::. :::::::::::::::::::::::::::: gi|818 MAAAGGGA--AAAAGRAYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 YDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG ::::::::::::::::::::::::::::::::::::::: :.:::::::::::::::... gi|818 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEPQAQSGS 160 170 180 190 200 210 hk0405 GGCCSSG ::::::: gi|818 GGCCSSG 220 >>gi|46577689|sp|P35282|RAB21_MOUSE Ras-related protein (222 aa) initn: 1471 init1: 1392 opt: 1418 Z-score: 1599.1 bits: 303.2 E(): 2e-80 Smith-Waterman score: 1418; 96.444% identity (98.222% similar) in 225 aa overlap (23-247:1-222) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR :::::::. :::::::::::::::::::::::::::: gi|465 MAAAGGGA--AAAAGRAYSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 YDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG ::::::::::::::::::::::::::::::::::::::: :.:::::::::::::::.:: gi|465 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRGVQIIDDEPQAQSSG 160 170 180 190 200 210 hk0405 GGCCSSG : ::::: gi|465 G-CCSSG 220 >>gi|126339429|ref|XP_001370428.1| PREDICTED: similar to (227 aa) initn: 1593 init1: 1385 opt: 1416 Z-score: 1596.7 bits: 302.8 E(): 2.7e-80 Smith-Waterman score: 1416; 95.133% identity (97.788% similar) in 226 aa overlap (24-247:3-227) 10 20 30 40 50 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAA--GRAYSFKVVLLGEGCVGKTSLV :::::::::.:.: :::::::::::::::::::::: gi|126 MAAAAGGGGGGGAGASGGRAYSFKVVLLGEGCVGKTSLV 10 20 30 60 70 80 90 100 110 hk0405 LRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAI 40 50 60 70 80 90 120 130 140 150 160 170 hk0405 LVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGA :::::::::::::::::::::::::::::::::::::::::::::::.::::.::::::: gi|126 LVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYAESVGA 100 110 120 130 140 150 180 190 200 210 220 230 hk0405 KHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQT ::::::::::::::::::::::::::::::::::::::::: : :::::::::::::.:. gi|126 KHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQQGMARRGVQIIDDEPQGQS 160 170 180 190 200 210 240 hk0405 SGGGCCSSG ::: ::::: gi|126 SGG-CCSSG 220 >>gi|118082329|ref|XP_001233648.1| PREDICTED: similar to (220 aa) initn: 1357 init1: 1357 opt: 1381 Z-score: 1557.6 bits: 295.5 E(): 4.1e-78 Smith-Waterman score: 1381; 94.954% identity (98.624% similar) in 218 aa overlap (30-247:4-220) 10 20 30 40 50 60 hk0405 RRCRGCREGGATLGLGRPGSDGMAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLR : ::::.::..:::::::::::::::::::: gi|118 MAAGTGAAAGGRSFSFKVVLLGEGCVGKTSLVLR 10 20 30 70 80 90 100 110 120 hk0405 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 YCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILV 40 50 60 70 80 90 130 140 150 160 170 180 hk0405 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH :::::::::::::::::::::::::::::::::::::::::::::.::::.::::::::: gi|118 YDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSVQEAETYAESVGAKH 100 110 120 130 140 150 190 200 210 220 230 240 hk0405 YHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSG ::::::::::::::::::::::::::::::::.:::::: :::::::::::::::.:.:: gi|118 YHTSAKQNKGIEELFLDLCKRMIETAQVDERARGNGSSQSGTARRGVQIIDDEPQVQSSG 160 170 180 190 200 210 hk0405 GGCCSSG : ::::: gi|118 G-CCSSG 220 247 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 22:39:53 2008 done: Tue Aug 12 22:42:36 2008 Total Scan time: 685.660 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]