hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-22475602/chunk_1/iprscan-20080812-22475602.nocrc
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Query sequence: hk04088
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosph  2054.5          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR02093   1/1      46   850 ..     1   822 []  2054.5        0

Alignments of top-scoring domains:
TIGR02093: domain 1 of 1, from 46 to 850: score 2054.5, E = 0
                   *->dkeqfkrnilehLeytlgksiedAtprdlYtAlakaVRdrlvdrWle
                      d++++++++++hL++tl+k++++Atprd+++Ala++VRd+lv rW++
     hk04088    46    DVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIR 92   

                   TqekyrdnnqKqVYYLSaEFLiGRlLgNNLlNLGLydevkeALeeLGldL
                   Tq++y+++++K++YYLS+EF++GR+L+N+++NLGL+++++eA+++LGldL
     hk04088    93 TQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDL 142  

                   eeileiEeDagLGNGGLGRLAACFlDSlATLglPavGYGIRYeYGlFkQk
                   ee++eiEeDagLGNGGLGRLAACFlDS+ATLgl+a+GYGIRYe+G+F+Qk
     hk04088   143 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQK 192  

                   IeDGwQVElPDdWLrygGNPWEirRpdrsveVrFgGrVelqpdedGrlrp
                   I++GwQVE  DdWLryg NPWE +Rp+++++V+F+GrVe++pd+     +
     hk04088   193 IVNGWQVEEADDWLRYG-NPWEKARPEYMLPVHFYGRVEHTPDG-----V 236  

                   rWvpaetVlAvPYDvPVpGYrtdtvNtLRLWsAeapseeFdldaFNaGdY
                   +W ++++VlA+PYD+PVpGY+++tvNt+RLWsA+a +++F+l++FN GdY
     hk04088   237 KWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKA-PNDFKLQDFNVGDY 285  

                   ieAveeknrAenIsrVLYPnDstyeGKeLRLkQQYFfVSASLQDIIrrhk
                   ieAv ++n AenIsrVLYPnD+++eGKeLRLkQ+YF V+ +LQDIIrr+k
     hk04088   286 IEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVASTLQDIIRRFK 335  

                   e.....kerthgdksledfpkKvaiQLNDTHPalAIPELMRLLiDEegld
                   +++ + +++++++  +e+fp+KvaiQLNDTHPal+IPELMR+L+D+e++d
     hk04088   336 SskfgcRDPVRTC--FETFPDKVAIQLNDTHPALSIPELMRILVDVEKVD 383  

                   WDeAWdITtkTfAYTNHTlLPEALEkWpvdLFekLLPRhleIIyEINaRF
                   WD+AW+IT+kT+AYTNHT+LPEALE+Wpv++FekLLPRhleIIy+IN+R+
     hk04088   384 WDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRH 433  

                   laelaakyPgDeakirrmsIIeEgqenasKrrVRMAnLAivGShsVNGVA
                   l+++aa +PgD++++rrms+IeEg   ++Kr ++MA+L+++GSh+VNGVA
     hk04088   434 LDHVAALFPGDVDRLRRMSVIEEG---DCKR-INMAHLCVIGSHAVNGVA 479  

                   aLHSELLKedllkDFyeLyPeKFnNKTNGITPRRWLalaNPgLSalltEt
                   ++HSE++K++++kDFyeL PeKF+NKTNGITPRRWL+l+NPgL+  + E+
     hk04088   480 RIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLANTIVEK 529  

                   IGTdeWltdLdlLkkLepyadDseFlekfaqvKqaNKqrLAayikeetGV
                   IG +e+ltdL++LkkL+p++ D++F++++a+vKq+NK +++a++ +e+ V
     hk04088   530 IG-EEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQENKLKFSAFLEKEYKV 578  

                   evdPnsiFDVQVKRlHEYKRQLLNvLhViylYnrIKedpskdRivPRTvI
                   +++P+s+FDV+VKR+HEYKRQLLN+LhV++lYnrIK+dp+k+ +vPRTv+
     hk04088   579 KINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKA-FVPRTVM 627  

                   FGGKAAPGYhmAKlIIKLINsVAevVNnDPaVgdkLKVVFvpNYnVSlAE
                   +GGKAAPGYhmAKlIIKL++s+++vVN+DP Vgd+LKV+F++NY+VSlAE
     hk04088   628 IGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAE 677  

                   lIiPAaDlSEQISTAGKEASGTGNMKFmLNGALTIGTlDGANVEIrEeVG
                   ++iPAaDlS+QISTAG+EASGTGNMKFmLNGALTIGT+DGANVE++Ee+G
     hk04088   678 KVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAG 727  

                   aENiFIFGltveEVeelrekGYnpsreyYeadPeLkrvldlissGtFspg
                   aEN FIFGl+ve+Ve+l +kGYn + eyY++ PeLk+++d+issG+Fsp+
     hk04088   728 AENLFIFGLRVEDVEALDRKGYNAR-EYYDHLPELKQAVDQISSGFFSPK 776  

                   dpdlfrplvdsLlnhyGkdegDpyfVLaDFeaYvdaQerVdalYrDqeeW
                   +pd+f+++v++L++      +D++ V+aD+eaY+++Q++Vd+lYr+++eW
     hk04088   777 EPDCFKDIVNMLMH------HDRFKVFADYEAYMQCQAQVDQLYRNPKEW 820  

                   tkksIlNiAnsGkFSSDRTIreYAkeIWhv<-*
                   tkk+I+NiA+sGkFSSDRTI+eYA+eIW+v   
     hk04088   821 TKKVIRNIACSGKFSSDRTITEYAREIWGV    850  

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