hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-23153037/chunk_1/iprscan-20080812-23153037.nocrc
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Query sequence: hk04568
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00160                                                 490.3   8.9e-143   2
SM00755                                                  83.8    2.1e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00160    1/2      29   158 ..     1   143 []   204.5  9.9e-57
SM00160    2/2     326   455 ..     1   143 []   285.8  3.1e-81
SM00755    1/1     697   744 ..     1    50 []    83.8  2.1e-20

Alignments of top-scoring domains:
SM00160: domain 1 of 2, from 29 to 158: score 204.5, E = 9.9e-57
                   *->fkPvvpLpdLLvEvkTGEEdEeviFsaRAKLYrfdnekkeWKERGvG
                      f+Pvv+ p+  vE+ TGEE+E v++s+  KL+rfd+e+ +WKERG+G
     hk04568    29    FEPVVQMPE-KVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLG 74   

                   dlKiLkskdnGlkkvRivMRrDSgvlKVcaNhpIvksMtlkplakgSASS
                   +lKiLk+  n  +k R +MRr+ +vlKVcaNh I+ +M lkpl ++    
     hk04568    75 NLKILKNEVN--GKLRMLMRRE-QVLKVCANHWITTTMNLKPLSGS---- 117  

                   GGSeralkwitpedfadgepklvllavrfktkeeAdelFkkiveea<-*
                      +ra+ w  ++df+dg +kl+ la++fkt e+A+e Fk ++ee+   
     hk04568   118 ---DRAWMW-SASDFSDGDAKLERLAAKFKTPELAEE-FKQKFEEC    158  

SM00160: domain 2 of 2, from 326 to 455: score 285.8, E = 3.1e-81
                   *->fkPvvpLpdLLvEvkTGEEdEeviFsaRAKLYrfdnekkeWKERGvG
                      f+PvvpLpd LvEv++GEE+E+v+Fs+RA +Yr+d+++++WKERG+G
     hk04568   326    FEPVVPLPD-LVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIG 371  

                   dlKiLkskdnGlkkvRivMRrDSgvlKVcaNhpIvksMtlkplakgSASS
                   d+KiL+++dn  k+vRivMRrD +vlK+caNh+I+++M+l++++++    
     hk04568   372 DIKILQNYDN--KQVRIVMRRD-QVLKLCANHRITPDMSLQNMKGT---- 414  

                   GGSeralkwitpedfadgepklvllavrfktkeeAdelFkkiveea<-*
                      er+++w t++dfadge+k+++lavrfk +++Ad+ Fkki++ea   
     hk04568   415 ---ERVWVW-TACDFADGERKVEHLAVRFKLQDVADS-FKKIFDEA    455  

SM00755: domain 1 of 1, from 697 to 744: score 83.8, E = 2.1e-20
                   *->eeanfEYLKNVllqFLtlresdnaeretLlpVistvLqlSpeEmqkl
                      + an+EYLKNVllqF++l++++  ere+LlpVi+t+LqlSpeE+ kl
     hk04568   697    SAANLEYLKNVLLQFIFLKPGS--ERERLLPVINTMLQLSPEEKGKL 741  

                   lev<-*
                    +v   
     hk04568   742 AAV    744  

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