hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080812/iprscan-20080812-23274041/chunk_1/iprscan-20080812-23274041.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: hk04772 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF07714.7.ls Protein tyrosine kinase 497.2 1.8e-146 1 PF07714.7.fs Protein tyrosine kinase 495.3 6.5e-146 1 PF03623.4.fs Focal adhesion targeting region 360.4 3.5e-124 1 PF03623.4.ls Focal adhesion targeting region 362.3 7.1e-106 1 PF00069.15.fs Protein kinase domain 148.4 4.8e-42 1 PF00069.15.ls Protein kinase domain 150.3 4.9e-42 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.ls 1/1 374 628 .. 1 287 [] 150.3 4.9e-42 PF00069.15.fs 1/1 374 628 .. 1 287 [] 148.4 4.8e-42 PF07714.7.fs 1/1 374 628 .. 1 272 [] 495.3 6.5e-146 PF07714.7.ls 1/1 374 628 .. 1 272 [] 497.2 1.8e-146 PF03623.4.fs 1/1 869 1007 .] 1 139 [] 360.4 3.5e-124 PF03623.4.ls 1/1 869 1007 .] 1 139 [] 362.3 7.1e-106 Alignments of top-scoring domains: PF00069.15.ls: domain 1 of 1, from 374 to 628: score 150.3, E = 4.9e-42 *->yelleklGsGsfGtVykakhkgtgk...iVAvKiikkrkekskkdkt +el++++G+G fG V +++ + + + VA+K+ k ++ +s ++ hk04772 374 IELGRCIGEGQFGDVHQGIYMSPENpalAVAIKTCKNCTSDS--VRE 418 arrlsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdy ++++ E+ ++ ++Hp+Iv+li+v +++ +++++E+c G +L ++ hk04772 419 KFLQ-EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG----ELRSF 462 lsetrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldn l+ rk +l + ++ +a+Q+ +l+YL s++++HRD+ N+L+++ hk04772 463 LQ--VRKYSL--DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 508 ngvvdaflKiaDFGlAkklst.sss.lttfvGTpw..YmAPEvllggngy n+ v K++DFGl++ + s+ ++ G ++ ++mAPE ++ + hk04772 509 NDCV----KLGDFGLSRY--MeDSTyYKASKGKLPikWMAPESIN-FRRF 551 gtkvDvWSlGvilyellt.GkpPFsgevqds.ldqlqlirkilgpplefd ++++DvW +Gv ++e l +G PF+g +++d + +i++ + p + + hk04772 552 TSASDVWMFGVCMWEILMhGVKPFQGV---KnNDVIGRIENGERLPMPPN 598 spewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf< +p +++ +L++kc+++DPs+R+ ++e++ + hk04772 599 CP-----------------PTLYSLMTKCWAYDPSRRPRFTELKAQ--L 628 -* hk04772 - - PF00069.15.fs: domain 1 of 1, from 374 to 628: score 148.4, E = 4.8e-42 *->yelleklGsGsfGtVykakhkgtgk...iVAvKiikkrkekskkdkt +el++++G+G fG V +++ + + + VA+K+ k ++ +s ++ hk04772 374 IELGRCIGEGQFGDVHQGIYMSPENpalAVAIKTCKNCTSDS--VRE 418 arrlsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdy ++++ E+ ++ ++Hp+Iv+li+v +++ +++++E+c G +L ++ hk04772 419 KFLQ-EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG----ELRSF 462 lsetrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldn l+ rk +l + ++ +a+Q+ +l+YL s++++HRD+ N+L+++ hk04772 463 LQ--VRKYSL--DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 508 ngvvdaflKiaDFGlAkklst.sss.lttfvGTpw..YmAPEvllggngy n+ v K++DFGl++ + s+ ++ G ++ ++mAPE ++ + hk04772 509 NDCV----KLGDFGLSRY--MeDSTyYKASKGKLPikWMAPESIN-FRRF 551 gtkvDvWSlGvilyellt.GkpPFsgevqds.ldqlqlirkilgpplefd ++++DvW +Gv ++e l +G PF+g +++d + +i++ + p + + hk04772 552 TSASDVWMFGVCMWEILMhGVKPFQGV---KnNDVIGRIENGERLPMPPN 598 spewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf< +p +++ +L++kc+++DPs+R+ ++e++ + hk04772 599 CP-----------------PTLYSLMTKCWAYDPSRRPRFTELKAQ--L 628 -* hk04772 - - PF07714.7.fs: domain 1 of 1, from 374 to 628: score 495.3, E = 6.5e-146 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie ++lg+ +GeG+FG+V++G++ s++++ + VA+Kt+k+ +s++ hk04772 374 IELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCKN-CTSDSV-- 416 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGdL re+Fl+EA +M+++ dHp+iV+L+Gv+t + P ++i++E++ +G L hk04772 417 REKFLQEALTMRQF-DHPHIVKLIGVIT--ENP----VWIIMELCTLGEL 459 ldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLVs ++fL+ + + +L+l L+ +a+Q + +++YLesk+fvHRD+AARN+LVs hk04772 460 RSFLQVR--KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 507 enlvVKIsDFGLaRdiynddyYvrkkgggklPvkWmAPEslkygkFtskS +n +VK +DFGL+R++ +d++Y +k ++gklP+kWmAPEs+++++Fts+S hk04772 508 SNDCVKLGDFGLSRYM-EDSTY-YKASKGKLPIKWMAPESINFRRFTSAS 555 DVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCPdel DVW+FGV++WEi+ G +P ++g++n++v+ ++ e+G+RLp+P+nCP+ l hk04772 556 DVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI-ENGERLPMPPNCPPTL 603 YdlMlqCWaedPedRPtFselveeL<-* Y+lM++CWa+dP++RP+F+el +L hk04772 604 YSLMTKCWAYDPSRRPRFTELKAQL 628 PF07714.7.ls: domain 1 of 1, from 374 to 628: score 497.2, E = 1.8e-146 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie ++lg+ +GeG+FG+V++G++ s++++ + VA+Kt+k+ +s++ hk04772 374 IELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCKN-CTSDSV-- 416 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGdL re+Fl+EA +M+++ dHp+iV+L+Gv+t + P ++i++E++ +G L hk04772 417 REKFLQEALTMRQF-DHPHIVKLIGVIT--ENP----VWIIMELCTLGEL 459 ldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLVs ++fL+ + + +L+l L+ +a+Q + +++YLesk+fvHRD+AARN+LVs hk04772 460 RSFLQVR--KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 507 enlvVKIsDFGLaRdiynddyYvrkkgggklPvkWmAPEslkygkFtskS +n +VK +DFGL+R++ +d++Y +k ++gklP+kWmAPEs+++++Fts+S hk04772 508 SNDCVKLGDFGLSRYM-EDSTY-YKASKGKLPIKWMAPESINFRRFTSAS 555 DVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCPdel DVW+FGV++WEi+ G +P ++g++n++v+ ++ e+G+RLp+P+nCP+ l hk04772 556 DVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI-ENGERLPMPPNCPPTL 603 YdlMlqCWaedPedRPtFselveeL<-* Y+lM++CWa+dP++RP+F+el +L hk04772 604 YSLMTKCWAYDPSRRPRFTELKAQL 628 PF03623.4.fs: domain 1 of 1, from 869 to 1007: score 360.4, E = 3.5e-124 *->tanldRadDeVYlnvtllVkavleLsqevekappEgYvelVKnVGlk tanldR++D+VY+nvt+lVkav+e+s+++++appE+Yv++VK+VGl+ hk04772 869 TANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLA 915 LRkLLtSVDeilpiLPAsalkEiemAqklLnkDLaELinkMrLAQQYsvT LR+LL++VDe p LPAs+++EiemAqklLn+DL ELinkM+LAQQY++T hk04772 916 LRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMT 965 sLdeEYkkqMLtAAHvLAvDAKNLLDvVDqarlryqllfpPs<-* sL++EYkkqMLtAAH+LAvDAKNLLDv+Dqarl++ + +P+ hk04772 966 SLQQEYKKQMLTAAHALAVDAKNLLDVIDQARLKMLGQTRPH 1007 PF03623.4.ls: domain 1 of 1, from 869 to 1007: score 362.3, E = 7.1e-106 *->tanldRadDeVYlnvtllVkavleLsqevekappEgYvelVKnVGlk tanldR++D+VY+nvt+lVkav+e+s+++++appE+Yv++VK+VGl+ hk04772 869 TANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLA 915 LRkLLtSVDeilpiLPAsalkEiemAqklLnkDLaELinkMrLAQQYsvT LR+LL++VDe p LPAs+++EiemAqklLn+DL ELinkM+LAQQY++T hk04772 916 LRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMT 965 sLdeEYkkqMLtAAHvLAvDAKNLLDvVDqarlryqllfpPs<-* sL++EYkkqMLtAAH+LAvDAKNLLDv+Dqarl++ + +P+ hk04772 966 SLQQEYKKQMLTAAHALAVDAKNLLDVIDQARLKMLGQTRPH 1007 //