hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-23332827/chunk_1/iprscan-20080812-23332827.nocrc
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Query sequence: hk04943
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF00774.10.fs Dihydropyridine sensitive L-type calcium   592.8   4.6e-190   1
PF00774.10.ls Dihydropyridine sensitive L-type calcium   594.8   7.5e-176   1
PF00018.18.ls SH3 domain                                   0.8      0.015   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF00018.18.ls   1/1      73   136 ..     1    59 []     0.8    0.015
PF00774.10.fs   1/1     233   457 ..     1   225 []   592.8 4.6e-190
PF00774.10.ls   1/1     233   457 ..     1   225 []   594.8 7.5e-176

Alignments of top-scoring domains:
PF00018.18.ls: domain 1 of 1, from 73 to 136: score 0.8, E = 0.015
                   *->kkvvALYDYearesdE.......LsFkkGDvitvleksddpgWWkgr
                        v+    Y a ++d+ + ++  +sF+  D+++v ek ++ +WW gr
     hk04943    73    FAVRTNVSYSAAHEDDvpvpgmaISFEAKDFLHVKEKFNN-DWWIGR 118  

                   lkgtgG.keGliPsNYVepv<-*
                   l    G + G+iPs  V +    
     hk04943   119 LVKE-GcEIGFIPSP-VKLE    136  

PF00774.10.fs: domain 1 of 1, from 233 to 457: score 592.8, E = 4.6e-190
                   *->vvPsmRPvvLvGPsLKGYEvtDmmqKAlFDfLKHRFdGRisitRvtA
                      vvPsmRPvvLvGPsLKGYEvtDmmqKAlFDfLKHRF+GRisitRvtA
     hk04943   233    VVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTA 279  

                   DisLAKRsvLnnPsKraiiERsntRsslaEvqsEiERiFELartlqLvvL
                   DisLAKRsvLnnPsK+aiiERsntRsslaEvqsEiERiFELartlqLvvL
     hk04943   280 DISLAKRSVLNNPSKHAIIERSNTRSSLAEVQSEIERIFELARTLQLVVL 329  

                   DaDtinHPaqLsKtsLAPiivyvKissPKvLqRLiksRGKsqskhlnvqm
                   DaDtinHPaqLsKtsLAPiivyvKissPKvLqRLiksRGKsq+khlnvqm
     hk04943   330 DADTINHPAQLSKTSLAPIIVYVKISSPKVLQRLIKSRGKSQAKHLNVQM 379  

                   vAadKLaqCppElFDviLDEnqLEDACEHLAeylEaYWkAtHpPvssppn
                   vAadKLaqCppElFDviLDEnqLEDACEHLA+ylEaYWkAtHpP+ss+pn
     hk04943   380 VAADKLAQCPPELFDVILDENQLEDACEHLADYLEAYWKATHPPSSSLPN 429  

                   plenrtlatailglqpalaqelqgerge<-*
                   pl++rtlat++l+l+p+la+++qg++g+   
     hk04943   430 PLLSRTLATSSLPLSPTLASNSQGSQGD    457  

PF00774.10.ls: domain 1 of 1, from 233 to 457: score 594.8, E = 7.5e-176
                   *->vvPsmRPvvLvGPsLKGYEvtDmmqKAlFDfLKHRFdGRisitRvtA
                      vvPsmRPvvLvGPsLKGYEvtDmmqKAlFDfLKHRF+GRisitRvtA
     hk04943   233    VVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTA 279  

                   DisLAKRsvLnnPsKraiiERsntRsslaEvqsEiERiFELartlqLvvL
                   DisLAKRsvLnnPsK+aiiERsntRsslaEvqsEiERiFELartlqLvvL
     hk04943   280 DISLAKRSVLNNPSKHAIIERSNTRSSLAEVQSEIERIFELARTLQLVVL 329  

                   DaDtinHPaqLsKtsLAPiivyvKissPKvLqRLiksRGKsqskhlnvqm
                   DaDtinHPaqLsKtsLAPiivyvKissPKvLqRLiksRGKsq+khlnvqm
     hk04943   330 DADTINHPAQLSKTSLAPIIVYVKISSPKVLQRLIKSRGKSQAKHLNVQM 379  

                   vAadKLaqCppElFDviLDEnqLEDACEHLAeylEaYWkAtHpPvssppn
                   vAadKLaqCppElFDviLDEnqLEDACEHLA+ylEaYWkAtHpP+ss+pn
     hk04943   380 VAADKLAQCPPELFDVILDENQLEDACEHLADYLEAYWKATHPPSSSLPN 429  

                   plenrtlatailglqpalaqelqgerge<-*
                   pl++rtlat++l+l+p+la+++qg++g+   
     hk04943   430 PLLSRTLATSSLPLSPTLASNSQGSQGD    457  

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