# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk05083.fasta.nr -Q hk05083.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk05083, 1192 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6842540 sequences Expectation_n fit: rho(ln(x))= 5.0134+/-0.000183; mu= 15.1250+/- 0.010 mean_var=70.0863+/-13.736, 0's: 45 Z-trim: 54 B-trim: 0 in 0/67 Lambda= 0.153200 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|12643730|sp|Q16531.1|DDB1_HUMAN DNA damage-bind (1140) 7452 1657.1 0 gi|73983859|ref|XP_533275.2| PREDICTED: similar to (1140) 7447 1656.0 0 gi|418316|sp|P33194|DDB1_CERAE DNA damage-binding (1140) 7444 1655.3 0 gi|75041202|sp|Q5R649.1|DDB1_PONAB DNA damage-bind (1140) 7441 1654.7 0 gi|134034086|sp|A1A4K3|DDB1_BOVIN DNA damage-bindi (1140) 7438 1654.0 0 gi|149062405|gb|EDM12828.1| damage-specific DNA bi (1140) 7435 1653.4 0 gi|1136228|gb|AAA88883.1| UV-damaged DNA binding f (1140) 7433 1652.9 0 gi|134034087|sp|Q3U1J4|DDB1_MOUSE DNA damage-bindi (1140) 7432 1652.7 0 gi|74215029|dbj|BAE33503.1| unnamed protein produc (1140) 7429 1652.0 0 gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum G (1140) 7428 1651.8 0 gi|74138855|dbj|BAE27231.1| unnamed protein produc (1140) 7426 1651.4 0 gi|149725200|ref|XP_001502072.1| PREDICTED: simila (1140) 7420 1650.0 0 gi|5353754|gb|AAD42230.1|AF159853_1 damage-specifi (1140) 7402 1646.1 0 gi|74178494|dbj|BAE32502.1| unnamed protein produc (1140) 7394 1644.3 0 gi|81868411|sp|Q9ESW0|DDB1_RAT DNA damage-binding (1140) 7390 1643.4 0 gi|119594342|gb|EAW73936.1| damage-specific DNA bi (1146) 7378 1640.8 0 gi|114637852|ref|XP_508472.2| PREDICTED: similar t (1140) 7313 1626.4 0 gi|109105941|ref|XP_001082958.1| PREDICTED: damage (1197) 7286 1620.4 0 gi|82098863|sp|Q805F9|DDB1_CHICK DNA damage-bindin (1140) 7262 1615.1 0 gi|38303806|gb|AAH61946.1| MGC68476 protein [Xenop (1140) 7026 1563.0 0 gi|119594339|gb|EAW73933.1| damage-specific DNA bi (1094) 6998 1556.8 0 gi|16197726|emb|CAC94909.1| damaged-DNA recognitio ( 994) 6413 1427.4 0 gi|148709424|gb|EDL41370.1| damage specific DNA bi ( 968) 6300 1402.4 0 gi|119594340|gb|EAW73934.1| damage-specific DNA bi ( 923) 6019 1340.3 0 gi|194389106|dbj|BAG61570.1| unnamed protein produ (1009) 5915 1317.4 0 gi|119594343|gb|EAW73937.1| damage-specific DNA bi ( 896) 5781 1287.7 0 gi|34784892|gb|AAH56837.1| Zgc:63840 [Danio rerio] ( 897) 5402 1203.9 0 gi|156545998|ref|XP_001607743.1| PREDICTED: simila (1137) 5206 1160.7 0 gi|66509028|ref|XP_396048.2| PREDICTED: similar to (1138) 5174 1153.6 0 gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anophele (1138) 5077 1132.2 0 gi|167876915|gb|EDS40298.1| conserved hypothetical (1138) 5045 1125.1 0 gi|108882186|gb|EAT46411.1| DNA repair protein xp- (1138) 5025 1120.7 0 gi|194381178|dbj|BAG64157.1| unnamed protein produ ( 826) 4828 1077.0 0 gi|190652020|gb|EDV49275.1| GG19434 [Drosophila er (1140) 4602 1027.2 0 gi|194183580|gb|EDW97191.1| GE26244 [Drosophila ya (1140) 4580 1022.3 0 gi|190626115|gb|EDV41639.1| GF17579 [Drosophila an (1140) 4578 1021.9 0 gi|194102843|gb|EDW24886.1| GL24391 [Drosophila pe (1140) 4578 1021.9 0 gi|4928452|gb|AAD33592.1|AF132145_1 damage-specifi (1140) 4578 1021.9 0 gi|54638233|gb|EAL27635.1| GA20574-PA [Drosophila (1140) 4576 1021.5 0 gi|194168382|gb|EDW83283.1| GK22405 [Drosophila wi (1140) 4569 1019.9 0 gi|194120319|gb|EDW42362.1| GM24084 [Drosophila se (1140) 4564 1018.8 0 gi|194199542|gb|EDX13118.1| GD18880 [Drosophila si (1140) 4545 1014.6 0 gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila vi (1140) 4537 1012.8 0 gi|193894369|gb|EDV93235.1| GH18378 [Drosophila gr (1140) 4518 1008.6 0 gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mo (1140) 4515 1008.0 0 gi|108882187|gb|EAT46412.1| DNA repair protein xp- ( 980) 4374 976.8 0 gi|190588721|gb|EDV28743.1| hypothetical protein T (1134) 3878 867.2 0 gi|91087281|ref|XP_975549.1| PREDICTED: similar to (1149) 3715 831.2 0 gi|74208347|dbj|BAE26370.1| unnamed protein produc ( 599) 3521 788.1 0 gi|193644722|ref|XP_001942922.1| PREDICTED: simila (1156) 3416 765.1 0 >>gi|12643730|sp|Q16531.1|DDB1_HUMAN DNA damage-binding (1140 aa) initn: 7452 init1: 7452 opt: 7452 Z-score: 8891.1 bits: 1657.1 E(): 0 Smith-Waterman score: 7452; 100.000% identity (100.000% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|126 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|126 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|73983859|ref|XP_533275.2| PREDICTED: similar to DNA (1140 aa) initn: 7447 init1: 7447 opt: 7447 Z-score: 8885.2 bits: 1656.0 E(): 0 Smith-Waterman score: 7447; 99.912% identity (100.000% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|739 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|739 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|739 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|418316|sp|P33194|DDB1_CERAE DNA damage-binding prot (1140 aa) initn: 7444 init1: 7444 opt: 7444 Z-score: 8881.6 bits: 1655.3 E(): 0 Smith-Waterman score: 7444; 99.912% identity (100.000% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN ::::::::::::::::::::.::::::::: gi|418 MSYNYVVTAQKPTAVNGCVTAHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|418 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|418 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|75041202|sp|Q5R649.1|DDB1_PONAB DNA damage-binding (1140 aa) initn: 7441 init1: 7441 opt: 7441 Z-score: 8878.0 bits: 1654.7 E(): 0 Smith-Waterman score: 7441; 99.825% identity (99.912% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|750 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|750 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNVCILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YPMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|750 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|134034086|sp|A1A4K3|DDB1_BOVIN DNA damage-binding p (1140 aa) initn: 7438 init1: 7438 opt: 7438 Z-score: 8874.4 bits: 1654.0 E(): 0 Smith-Waterman score: 7438; 99.737% identity (99.912% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|134 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|134 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: : gi|134 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARIAK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|134 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|149062405|gb|EDM12828.1| damage-specific DNA bindin (1140 aa) initn: 7435 init1: 7435 opt: 7435 Z-score: 8870.8 bits: 1653.4 E(): 0 Smith-Waterman score: 7435; 99.737% identity (100.000% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|149 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|149 RNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|149 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|149 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGESNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|149 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|1136228|gb|AAA88883.1| UV-damaged DNA binding facto (1140 aa) initn: 7433 init1: 7433 opt: 7433 Z-score: 8868.4 bits: 1652.9 E(): 0 Smith-Waterman score: 7433; 99.737% identity (99.912% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|113 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|113 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::..::::::::::::::::::::::::::::::: gi|113 YSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|113 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|113 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|134034087|sp|Q3U1J4|DDB1_MOUSE DNA damage-binding p (1140 aa) initn: 7432 init1: 7432 opt: 7432 Z-score: 8867.3 bits: 1652.7 E(): 0 Smith-Waterman score: 7432; 99.649% identity (100.000% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|134 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|134 RNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|134 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|134 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|134 HLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|134 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|74215029|dbj|BAE33503.1| unnamed protein product [M (1140 aa) initn: 7429 init1: 7429 opt: 7429 Z-score: 8863.7 bits: 1652.0 E(): 0 Smith-Waterman score: 7429; 99.561% identity (100.000% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|742 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|742 RNGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|742 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|742 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|742 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQRDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|742 HLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|742 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 >>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group (1140 aa) initn: 7428 init1: 7428 opt: 7428 Z-score: 8862.5 bits: 1651.8 E(): 0 Smith-Waterman score: 7428; 99.649% identity (99.825% similar) in 1140 aa overlap (53-1192:1-1140) 30 40 50 60 70 80 hk0508 CALLGATCLFACVPLSSVALESRRAAPSLDMSYNYVVTAQKPTAVNGCVTGHFTSAEDLN :::::::::::::::::::::::::::::: gi|263 MSYNYVVTAQKPTAVNGCVTGHFTSAEDLN 10 20 30 90 100 110 120 130 140 hk0508 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILE 40 50 60 70 80 90 150 160 170 180 190 200 hk0508 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNK 100 110 120 130 140 150 210 220 230 240 250 260 hk0508 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQE 160 170 180 190 200 210 270 280 290 300 310 320 hk0508 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSR 220 230 240 250 260 270 330 340 350 360 370 380 hk0508 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGD 280 290 300 310 320 330 390 400 410 420 430 440 hk0508 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRII 340 350 360 370 380 390 450 460 470 480 490 500 hk0508 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMG 400 410 420 430 440 450 510 520 530 540 550 560 hk0508 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 460 470 480 490 500 510 570 580 590 600 610 620 hk0508 AVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|263 AVGRALYYLQIHPQELRQISHTGMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 520 530 540 550 560 570 630 640 650 660 670 680 hk0508 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 580 590 600 610 620 630 690 700 710 720 730 740 hk0508 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 640 650 660 670 680 690 750 760 770 780 790 800 hk0508 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTT 700 710 720 730 740 750 810 820 830 840 850 860 hk0508 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN 760 770 780 790 800 810 870 880 890 900 910 920 hk0508 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|263 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGDV 820 830 840 850 860 870 930 940 950 960 970 980 hk0508 YSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSV :::::::::::::::::::::::::::..::::::::::::::::::::::::::::::: gi|263 YSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSV 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 hk0508 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQ 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 hk0508 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNL 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 hk0508 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVA 1060 1070 1080 1090 1100 1110 1170 1180 1190 hk0508 NLQYDDGSGMKREATADDLIKVVEELTRIH :::::::::::::::::::::::::::::: gi|263 NLQYDDGSGMKREATADDLIKVVEELTRIH 1120 1130 1140 1192 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 23:42:36 2008 done: Tue Aug 12 23:44:50 2008 Total Scan time: 1142.830 Total Display time: 0.850 Function used was FASTA [version 34.26.5 April 26, 2007]