hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090630/iprscan-20090630-18350809/chunk_1/iprscan-20090630-18350809.nocrc
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Query sequence: hk06136s1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00642.15.fs Zinc finger C-x8-C-x5-C-x3-H type (and simil    34.6    9.6e-11   1
PF00642.15.ls Zinc finger C-x8-C-x5-C-x3-H type (and simil    36.6      8e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00642.15.fs   1/1      39    65 ..     1    27 []    34.6  9.6e-11
PF00642.15.ls   1/1      39    65 ..     1    27 []    36.6    8e-08

Alignments of top-scoring domains:
PF00642.15.fs: domain 1 of 1, from 39 to 65: score 34.6, E = 9.6e-11
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                        +  Cr++++tG C yG++C+F Hg+   
   hk06136s1    39    TAETQCRNWLKTGNCLYGNTCRFVHGP    65   

PF00642.15.ls: domain 1 of 1, from 39 to 65: score 36.6, E = 8e-08
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                        +  Cr++++tG C yG++C+F Hg+   
   hk06136s1    39    TAETQCRNWLKTGNCLYGNTCRFVHGP    65   

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