hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-00300961/chunk_1/iprscan-20080813-00300961.nocrc
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Query sequence: hk06194
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF06602.5.ls   Myotubularin-related                     245.4    1.2e-70   1
PF06602.5.fs   Myotubularin-related                     243.4    4.5e-70   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF06602.5.fs     1/1     157   273 ..     1   123 []   243.4  4.5e-70
PF06602.5.ls     1/1     157   273 ..     1   123 []   245.4  1.2e-70

Alignments of top-scoring domains:
PF06602.5.fs: domain 1 of 1, from 157 to 273: score 243.4, E = 4.5e-70
                   *->YelCpsYPakLvVPksisDdeLkkvAkFRsrgRlPVLswrHqengAv
                      Y++C++YP++L+VP+ +s   +++++kFRs+gR+PVLs++Hq  +A+
     hk06194   157    YKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAA 203  

                   IvRcSQPLvGfsgkRckeDEkllkailkanaiDekiqskklyIvDaRprt
                   I+RcSQPL+Gfs +Rc eDE+ll+ai+kan+      ++++y++D+Rp++
     hk06194   204 ICRCSQPLSGFS-ARCLEDEHLLQAISKANP-----VNRYMYVMDTRPKL 247  

                   nAlaNrAkGGGyEneenYpnaelvfl<-*
                   nA+aNrA+G+GyEne+nY+n++++f+   
     hk06194   248 NAMANRAAGKGYENEDNYSNIRFQFV    273  

PF06602.5.ls: domain 1 of 1, from 157 to 273: score 245.4, E = 1.2e-70
                   *->YelCpsYPakLvVPksisDdeLkkvAkFRsrgRlPVLswrHqengAv
                      Y++C++YP++L+VP+ +s   +++++kFRs+gR+PVLs++Hq  +A+
     hk06194   157    YKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAA 203  

                   IvRcSQPLvGfsgkRckeDEkllkailkanaiDekiqskklyIvDaRprt
                   I+RcSQPL+Gfs +Rc eDE+ll+ai+kan+      ++++y++D+Rp++
     hk06194   204 ICRCSQPLSGFS-ARCLEDEHLLQAISKANP-----VNRYMYVMDTRPKL 247  

                   nAlaNrAkGGGyEneenYpnaelvfl<-*
                   nA+aNrA+G+GyEne+nY+n++++f+   
     hk06194   248 NAMANRAAGKGYENEDNYSNIRFQFV    273  

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