hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-00353745/chunk_1/iprscan-20080813-00353745.nocrc
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Query sequence: hk06295
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
TIGR00239  2oxo_dh_E1: 2-oxoglutarate dehydrogenase,   1017.7   1.3e-303   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
TIGR00239    1/1      75  1040 ..     1   990 []  1017.7 1.3e-303

Alignments of top-scoring domains:
TIGR00239: domain 1 of 1, from 75 to 1040: score 1017.7, E = 1.3e-303
                   *->flgganlgyieelyeaylkdPssvdpswretfdelpgpgipapeqfh
                      fl+g + +y+ee+y a+l++P sv+ sw+ +f +  +   p   +++
     hk06295    75    FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAG-APPGTAYQ 120  

                   apspsyfrrlagaapkgtvtagdp..denaslvkllqllcrayrfrGhlk
                   +p p     la  a+  + +   p+ d+ ++ ++ +q l ray++rGh  
     hk06295   121 SPLPLSRGSLAAVAHAQSLVEAQPnvDKLVEDHLAVQSLIRAYQIRGHHV 170  

                   anldPlgysfGsnwdepkppeld.....lsyyglteedldetfnlgpgvl
                   a ldPlg+   +  d ++p+++ +++++l +ygl e dld+ f l+   +
     hk06295   171 AQLDPLGIL-DADLDSSVPADIIsstdkLGFYGLDESDLDKVFHLPTTTF 219  

                   pkdardgpkklgnglelleylkktycgsiglefdhvpdfeekdWlqekie
                           + l  ++e++  l+  yc  ig+ef+ + d e+++W+++k e
     hk06295   220 IGG---QESALP-LREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFE 265  

                   sglepfqfnseeklsafldrltaaegferflgakfpgakrfsleGldalv
                   ++    qf+ eek+  +l rl  ++ fe+fl +k+  +krf+leG + l+
     hk06295   266 TP-GIMQFTNEEKRT-LLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLI 313  

                   PglkelirhsvksGtedvvlGmahrGrlnvlvnvlgkppeslfdefagkp
                   P lk++i++s++ G++ v++Gm hrGrlnvl+nv++k  e +f +f  k 
     hk06295   314 PALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKL 363  

                   asdlpsedPlesatdGtGdvkyhlGrfgsdf.ttdgklvhlplafnPshl
                      +          +G+GdvkyhlG++  + + + ++ + l+l++nPshl
     hk06295   364 EAAD----------EGSGDVKYHLGMYHRRInRVTDRNITLSLVANPSHL 403  

                   eivsPvvlGstrarlerlndlGyPvpeetkvlaillhGdaafaGqGvvqe
                   e  +Pvv+G+t+a +    d     +e  kv++illhGdaafaGqG+v+e
     hk06295   404 EAADPVVMGKTKAEQFYCGD-----TEGKKVMSILLHGDAAFAGQGIVYE 448  

                   tlnlsslrgysvGGtihivinnqiGfttsnpadarstpycsdlakgieaP
                   t  ls l+ y + Gt+h+v+nnqiGftt +p+ ars+py++d+a+ + aP
     hk06295   449 TFHLSDLPSYTTHGTVHVVVNNQIGFTT-DPRMARSSPYPTDVARVVNAP 497  

                   ifhvnaddpeavafafrlaveyrntfkrdvlidlvgyrrhGhneadePsa
                   ifhvn+ dpeav ++ ++a+e+r tf++dv++dlv+yrr+Ghne+deP +
     hk06295   498 IFHVNSGDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMF 547  

                   tqPllydkikkhptprkvyadklvsegvvteedvtehkkWvwnlyrdale
                   tqPl+y+ i+k++ + + ya+ lvs+gvv + + +e      ++ ++a+ 
     hk06295   548 TQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFA 597  

                   kgdd.vvpswrewltaawewlksPpelpeewlpgypdkvpesrlkelgkl
                    ++d+++   + wl + w ++ +    p  ++ +     + +  ++    
     hk06295   598 RSKDeKILHIKHWLDSPWPGFFTLDGQPRSMSCPSTGLTEDILTHIGNVA 647  

                   lgewpeglefhprlakiygdrgkalfdgeklldWglaeslafatllddGt
                    +  +e + +h  l++i++ r   +      +dW+lae +af++ll++G+
     hk06295   648 SSVPVENFTIHGGLSRILKTR-GEMVKNRT-VDWALAEYMAFGSLLKEGI 695  

                   pvrlsGedsgrGtffhrhavlhdqe.sgagytPlshlhngkgdfavwnsp
                    +rlsG+d++rGtf+hrh vlhdq+ +  + +P++hl  +++ ++v ns+
     hk06295   696 HIRLSGQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSS 745  

                   lseggvlgfeyGyaltsPetlvlWeaqfGdfangaqvvidqfisgGeqkW
                   lse+gvlgfe G+a++sP  lvlWeaqfGdf n+aq +idqfi  G++kW
     hk06295   746 LSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKW 795  

                   grkcGlvlllPhGyeGqGPehssgrlerflqlaaedPryfPseeklq...
                    r+ G+vlllPhG eG GPehss+r erflq++++dP  +P  ++   + 
     hk06295   796 VRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVLPDLKEANfdi 845  

                   rqhqdcnwqvcvpttpaqlfhilrrqaklllrefrrPlvllspksllrhP
                   +q  dcnw v++ +tp ++fh+lrrq    l  fr+Pl++++pksllrhP
     hk06295   846 NQLYDCNWVVVNCSTPGNFFHVLRRQI---LLPFRKPLIIFTPKSLLRHP 892  

                   lavssleelsegg.fqpvigeieegglsldpeevkrlvlcsGkvyydlsv
                    a+ss +e+  g++fq vi   e+g    +pe vkrl+ c+Gkvyydl  
     hk06295   893 EARSSFDEMLPGThFQRVI--PEDGPAAQNPENVKRLLFCTGKVYYDL-T 939  

                   heqrrengdkdlailrieqlyPfPhkglkellepypnlkeivWcqeePln
                    e++  +    +ai rieql PfP+  l + +++ypn  e+ Wcqee  n
     hk06295   940 RERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKN 988  

                   qGaWgysepyltevlpegdkykdvklryaGrppsgspavGypslhlkeed
                   qG + y++p+l++++          + yaGr p+++pa G +  hl e +
     hk06295   989 QGYYDYVKPRLRTTISRA-----KPVWYAGRDPAAAPATGNKKTHLTELQ 1033 

                   nllkdal<-*
                    ll  a+   
     hk06295  1034 RLLDTAF    1040 

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