hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080813/iprscan-20080813-00473622/chunk_1/iprscan-20080813-00473622.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: hk06640y2 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00063.11.fs Myosin head (motor domain) 469.6 3.6e-138 2 PF00063.11.ls Myosin head (motor domain) 468.1 1e-137 1 PF00023.20.ls Ankyrin repeat 144.4 2.8e-40 5 PF00023.20.fs Ankyrin repeat 136.7 6e-38 6 PF00612.17.fs IQ calmodulin-binding motif 21.6 2.2e-05 1 PF00612.17.ls IQ calmodulin-binding motif 23.6 0.00063 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00023.20.fs 1/6 117 149 .. 1 33 [] 26.2 2.5e-06 PF00023.20.ls 1/5 117 149 .. 1 33 [] 28.2 2.6e-05 PF00023.20.fs 2/6 150 182 .. 1 33 [] 31.5 8.6e-08 PF00023.20.ls 2/5 150 182 .. 1 33 [] 33.5 7e-07 PF00023.20.fs 3/6 183 217 .. 1 33 [] 0.3 41 PF00023.20.ls 3/5 183 217 .. 1 33 [] 2.3 13 PF00023.20.fs 4/6 230 245 .. 18 33 .] 2.2 12 PF00023.20.ls 4/5 246 278 .. 1 33 [] 41.9 2.1e-09 PF00023.20.fs 5/6 246 278 .. 1 33 [] 39.9 3.9e-10 PF00023.20.ls 5/5 279 311 .. 1 33 [] 38.5 2.1e-08 PF00023.20.fs 6/6 279 311 .. 1 33 [] 36.5 3.4e-09 PF00063.11.fs 1/2 428 849 .. 1 483 [. 320.3 3.8e-94 PF00063.11.ls 1/1 428 1158 .. 1 791 [] 468.1 1e-137 PF00063.11.fs 2/2 869 1158 .. 504 791 .] 149.3 4.9e-44 PF00612.17.ls 1/1 1173 1193 .. 1 21 [] 23.6 0.00063 PF00612.17.fs 1/1 1173 1193 .. 1 21 [] 21.6 2.2e-05 Alignments of top-scoring domains: PF00023.20.fs: domain 1 of 6, from 117 to 149: score 26.2, E = 2.5e-06 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* G + LHl a+++n+ +++ L+++G ++n+qd hk06640y2 117 SGGSLLHLCARYDNAFIAEILIDRGVNVNHQDE 149 PF00023.20.ls: domain 1 of 5, from 117 to 149: score 28.2, E = 2.6e-05 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* G + LHl a+++n+ +++ L+++G ++n+qd hk06640y2 117 SGGSLLHLCARYDNAFIAEILIDRGVNVNHQDE 149 PF00023.20.fs: domain 2 of 6, from 150 to 182: score 31.5, E = 8.6e-08 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* d +TP H+A+ ++n+++v lL+ +GA++ +qd hk06640y2 150 DFWTPMHIACACDNPDIVLLLVLAGANVLLQDV 182 PF00023.20.ls: domain 2 of 5, from 150 to 182: score 33.5, E = 7e-07 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* d +TP H+A+ ++n+++v lL+ +GA++ +qd hk06640y2 150 DFWTPMHIACACDNPDIVLLLVLAGANVLLQDV 182 PF00023.20.fs: domain 3 of 6, from 183 to 217: score 0.3, E = 41 *->dGfTPLHlAalrg..nlevvklLlsqGAdlnaqdd<-* +G+ PL +A++ +++ ++++L ++G dl hk06640y2 183 NGNIPLDYAVEGTesSSILLTYLDENGVDLTSLRQ 217 PF00023.20.ls: domain 3 of 5, from 183 to 217: score 2.3, E = 13 *->dGfTPLHlAalrg..nlevvklLlsqGAdlnaqdd<-* +G+ PL +A++ +++ ++++L ++G dl hk06640y2 183 NGNIPLDYAVEGTesSSILLTYLDENGVDLTSLRQ 217 PF00023.20.fs: domain 4 of 6, from 230 to 245: score 2.2, E = 12 *->vklLlsqGAdlnaqdd<-* vk +ls G ++n ++d hk06640y2 230 VKHFLSSGGNVNEKND 245 PF00023.20.ls: domain 4 of 5, from 246 to 278: score 41.9, E = 2.1e-09 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +G T LH+A+ +g++evv+l l++G dln++dd hk06640y2 246 EGVTLLHMACASGYKEVVSLILEHGGDLNIVDD 278 PF00023.20.fs: domain 5 of 6, from 246 to 278: score 39.9, E = 3.9e-10 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +G T LH+A+ +g++evv+l l++G dln++dd hk06640y2 246 EGVTLLHMACASGYKEVVSLILEHGGDLNIVDD 278 PF00023.20.ls: domain 5 of 5, from 279 to 311: score 38.5, E = 2.1e-08 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +TPLHlAa++g++++vklLl + A++++++ hk06640y2 279 QYWTPLHLAAKYGQTNLVKLLLMHQANPHLVNC 311 PF00023.20.fs: domain 6 of 6, from 279 to 311: score 36.5, E = 3.4e-09 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +TPLHlAa++g++++vklLl + A++++++ hk06640y2 279 QYWTPLHLAAKYGQTNLVKLLLMHQANPHLVNC 311 PF00063.11.fs: domain 1 of 2, from 428 to 849: score 320.3, E = 3.8e-94 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrLp +Dl+ L+ ln+ s+L+ ++kR+ + +IYT++G++L vNPYk+Lp hk06640y2 428 NDDLATLSELNDGSLLYEIQKRFG-NNQIYTFIGDILLLVNPYKELP 473 iYteeiikaY...rGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGE iY+ + + Y +++Gk + lpPH+F+ ++A ++ +++++Q+ ++sGE hk06640y2 474 IYSSMVSQLYfssSGKLCSSLPPHLFSCVERAFHQLFREQRPQCFILSGE 523 SGAGKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqilqsNPi G GK+E++K ++++l+ +g ++ + +++++++ i hk06640y2 524 RGSGKSEASKQIIRHLTCRAGASR---------ATLDSRFKHVVC----I 560 LEAFGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSR LEAFG AKTt N+ SS F K++e+qF + + l G++I tYLLEKSR hk06640y2 561 LEAFGHAKTTLNDLSSCFIKYFELQFCERKQQ---LTGARIYTYLLEKSR 607 VvyQtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgT. v Q+ g+ NF IFY L++g+sa+e k L+L + + +YLnq T hk06640y2 608 LVSQPLGQSNFLIFYLLMDGLSAEE-KYGLHLN---NLCAHRYLNQ--Ti 651 ....ynPcytvDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILh +++ ++++ ++ + e ++ Al+++Gf++ e + +f ilAAILh hk06640y2 652 qddaSTGERSL-----NREKLAVLKRALNVVGFSSLEVENLFVILAAILH 696 LGNieGFkqdqatTGneeqAGvtvsedteeileiiaeLLGvDaeeLekaL LG i+ F + +++A ++d++ le +a++L+v+ eL+ aL hk06640y2 697 LGDIR-FTALN----EGNSA---FVSDLQL-LEQVAGMLQVSTDELASAL 737 lsrriktG.gggkRretvtkpqnveqAryaRDALAKaiYsRLFdWiVeki t + + ++ +++ + +++ A + RD LAK +YsRLF ++V+ hk06640y2 738 ------TTdIQYFKGDMIIRRHTIQIAEFFRDLLAKSLYSRLFSFLVNTM 781 NkaLsakeQasdSrGGqaaegdDTVSITVVdlPraaldktasf....IGv N L++++ ++ s+++ +IG+ hk06640y2 782 NSCLHSQD------------------------------EQKSMqtldIGI 801 LDIyGFEIFaekNSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIe< LDI+GFE F +kN FEQLc+N +NEK+ + N+ F EQ E ++Eg++ hk06640y2 802 LDIFGFEEF-QKNEFEQLCVNMTNEKMHHYINEVLFLHEQVECVQEGVT 849 -* hk06640y2 - - PF00063.11.ls: domain 1 of 1, from 428 to 1158: score 468.1, E = 1e-137 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrLp +Dl+ L+ ln+ s+L+ ++kR+ + +IYT++G++L vNPYk+Lp hk06640y2 428 NDDLATLSELNDGSLLYEIQKRFG-NNQIYTFIGDILLLVNPYKELP 473 iYteeiikaY...rGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGE iY+ + + Y +++Gk + lpPH+F+ ++A ++ +++++Q+ ++sGE hk06640y2 474 IYSSMVSQLYfssSGKLCSSLPPHLFSCVERAFHQLFREQRPQCFILSGE 523 SGAGKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqilqsNPi G GK+E++K ++++l+ +g ++ + +++++++ i hk06640y2 524 RGSGKSEASKQIIRHLTCRAGASR---------ATLDSRFKHVVC----I 560 LEAFGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSR LEAFG AKTt N+ SS F K++e+qF + + l G++I tYLLEKSR hk06640y2 561 LEAFGHAKTTLNDLSSCFIKYFELQFCERKQQ---LTGARIYTYLLEKSR 607 VvyQtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgT. v Q+ g+ NF IFY L++g+sa+e k L+L + + +YLnq T hk06640y2 608 LVSQPLGQSNFLIFYLLMDGLSAEE-KYGLHLN---NLCAHRYLNQ--Ti 651 ....ynPcytvDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILh +++ ++++ ++ + e ++ Al+++Gf++ e + +f ilAAILh hk06640y2 652 qddaSTGERSL-----NREKLAVLKRALNVVGFSSLEVENLFVILAAILH 696 LGNieGFkqdqatTGneeqAGvtvsedteeileiiaeLLGvDaeeLekaL LG i+ F + +++A ++d++ le +a++L+v+ eL+ aL hk06640y2 697 LGDIR-FTALN----EGNSA---FVSDLQL-LEQVAGMLQVSTDELASAL 737 lsrriktG.gggkRretvtkpqnveqAryaRDALAKaiYsRLFdWiVeki t + + ++ +++ + +++ A + RD LAK +YsRLF ++V+ hk06640y2 738 ------TTdIQYFKGDMIIRRHTIQIAEFFRDLLAKSLYSRLFSFLVNTM 781 NkaLsakeQasdSrGGqaaegdDTVSITVVdlPraaldktasf....IGv N L++++ ++ s+++ +IG+ hk06640y2 782 NSCLHSQD------------------------------EQKSMqtldIGI 801 LDIyGFEIFaekNSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIeW LDI+GFE F +kN FEQLc+N +NEK+ + N+ F EQ E ++Eg++ hk06640y2 802 LDIFGFEEF-QKNEFEQLCVNMTNEKMHHYINEVLFLHEQVECVQEGVT- 849 tfIdyglDnqacidLIEkK..kPpGIlslLDEeCrfPkatDqtFldKLlq ++ y nq +++ +kP G l+lLDEe+ + + ++ F +KL + hk06640y2 850 METAYSAGNQN--GVLDFFfqKPSGFLTLLDEESQMIWSVESNFPKKLQS 897 tfsskhprlthFAqkpgrfkkgksrqgk.teFiikHYAGdVeYnaegfle + + ++ ++ + +++ + ++ +t+F+i HYAG+V+Y++ g +e hk06640y2 898 LL-ESSNTNAVYSPMK-DGNGNVALKDHgTAFTIMHYAGRVMYDVVGAIE 945 KNkDpLfddlisllksSsdepllaeLFpeeel................se KNkD L+++l+ ++k S + + LF++ l+++++ + ++ + + hk06640y2 946 KNKDSLSQNLLFVMKTSEN-VVINHLFQS-KLsqtgslvsaypsfkfrGH 993 AaNltlkapdfeadfdeeeaaaksaklgsgkgksgkkknfle.....Tvg + l+ k +++ + e + +kl ++kg s+ +++ e++++ T + hk06640y2 994 KSALLSKKMTASSIIGENKNYLELSKLLKKKGTSTFLQRL-ErgdpvTIA 1042 sqfkeslgeLmktLsstAnlnPHfvRCIKPNekKkagqFDaslVlhQlrc sq + sl + L ++ +PHf+ CI+PN+ K +++FD+ V Ql++ hk06640y2 1043 SQLRKSLMDIIGKLQKC---TPHFIHCIRPNNSKLPDTFDNFYVSAQLQY 1089 lGvLEigiRirraGFPnRitfdeFlqRYrlLapktwpsgfrpewvgdakk GvLE + i r G+P R+ f++Fl+RY+ La ++ r++ + +a + hk06640y2 1090 IGVLE-MVKIFRYGYPVRLSFSDFLSRYKPLADTFL----REKKEQSAAE 1134 gceliLqslrqtpgnlDkeeyrfGkTKiFfR<-* c+l+Lq+ +l +++G K+F++ hk06640y2 1135 RCRLVLQQC-----KL--QGWQMGVRKVFLK 1158 PF00063.11.fs: domain 2 of 2, from 869 to 1158: score 149.3, E = 4.9e-44 *->kPpGIlslLDEeCrfPkatDqtFldKLlqtfsskhprlthFAqkpgr kP G l+lLDEe+ + + ++ F +KL + + + ++ ++ + hk06640y2 869 KPSGFLTLLDEESQMIWSVESNFPKKLQSLL-ESSNTNAVYSPMK-D 913 fkkgksrqgk.teFiikHYAGdVeYnaegfleKNkDpLfddlisllksSs +++ + ++ +t+F+i HYAG+V+Y++ g +eKNkD L+++l+ ++k S hk06640y2 914 GNGNVALKDHgTAFTIMHYAGRVMYDVVGAIEKNKDSLSQNLLFVMKTSE 963 depllaeLFpeeel................seAaNltlkapdfeadfdee + + LF++ l+++++ + ++ + + + l+ k +++ + e hk06640y2 964 N-VVINHLFQS-KLsqtgslvsaypsfkfrGHKSALLSKKMTASSIIGEN 1011 eaaaksaklgsgkgksgkkknfle.....TvgsqfkeslgeLmktLsstA + +kl ++kg s+ +++ e++++ T +sq + sl + L ++ hk06640y2 1012 KNYLELSKLLKKKGTSTFLQRL-ErgdpvTIASQLRKSLMDIIGKLQKC- 1059 nlnPHfvRCIKPNekKkagqFDaslVlhQlrclGvLEigiRirraGFPnR +PHf+ CI+PN+ K +++FD+ V Ql++ GvLE + i r G+P R hk06640y2 1060 --TPHFIHCIRPNNSKLPDTFDNFYVSAQLQYIGVLE-MVKIFRYGYPVR 1106 itfdeFlqRYrlLapktwpsgfrpewvgdakkgceliLqslrqtpgnlDk + f++Fl+RY+ La ++ r++ + +a + c+l+Lq+ +l hk06640y2 1107 LSFSDFLSRYKPLADTFL----REKKEQSAAERCRLVLQQC-----KL-- 1145 eeyrfGkTKiFfR<-* +++G K+F++ hk06640y2 1146 QGWQMGVRKVFLK 1158 PF00612.17.ls: domain 1 of 1, from 1173 to 1193: score 23.6, E = 0.00063 *->rraaikIQaawRGylaRkryk<-* +r +i+ Q+++RG+laR+++ hk06640y2 1173 QRKIITCQKVIRGFLARQHLL 1193 PF00612.17.fs: domain 1 of 1, from 1173 to 1193: score 21.6, E = 2.2e-05 *->rraaikIQaawRGylaRkryk<-* +r +i+ Q+++RG+laR+++ hk06640y2 1173 QRKIITCQKVIRGFLARQHLL 1193 //