# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk07083.fasta.nr -Q hk07083.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk07083, 994 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8946437 sequences Expectation_n fit: rho(ln(x))= 7.5459+/-0.00023; mu= 4.3572+/- 0.013 mean_var=247.9743+/-48.204, 0's: 40 Z-trim: 124 B-trim: 429 in 1/67 Lambda= 0.081446 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|132518|sp|P22670.1|RFX1_HUMAN RecName: Full=MHC ( 979) 6478 775.3 0 gi|119604793|gb|EAW84387.1| regulatory factor X, 1 ( 979) 6473 774.7 0 gi|114675711|ref|XP_524133.2| PREDICTED: regulator ( 979) 6468 774.1 0 gi|73986799|ref|XP_542024.2| PREDICTED: similar to ( 973) 6117 732.9 2.1e-208 gi|149037880|gb|EDL92240.1| regulatory factor X, 1 ( 964) 5537 664.7 6.9e-188 gi|34784952|gb|AAH57018.1| Regulatory factor X, 1 ( 963) 4803 578.5 6.3e-162 gi|26350635|dbj|BAC38954.1| unnamed protein produc ( 963) 4802 578.3 6.9e-162 gi|1350582|sp|P48377.1|RFX1_MOUSE RecName: Full=MH ( 963) 4798 577.9 9.5e-162 gi|109123701|ref|XP_001111344.1| PREDICTED: regula ( 809) 4704 566.7 1.8e-158 gi|26332070|dbj|BAC29765.1| unnamed protein produc ( 695) 4331 522.8 2.6e-145 gi|126323340|ref|XP_001377495.1| PREDICTED: simila (1099) 3619 439.4 5.2e-120 gi|141795697|gb|AAI39665.1| Zgc:162914 protein [Da ( 897) 3207 390.9 1.7e-105 gi|47212749|emb|CAF90595.1| unnamed protein produc ( 772) 3027 369.7 3.6e-99 gi|189515117|ref|XP_682728.2| PREDICTED: im:713736 ( 812) 2888 353.3 3.1e-94 gi|116487576|gb|AAI25863.1| Regulatory factor X, 3 ( 765) 2566 315.5 7.3e-83 gi|73946694|ref|XP_861094.1| PREDICTED: similar to ( 724) 2480 305.3 7.8e-80 gi|149270738|ref|XP_001479768.1| PREDICTED: simila ( 754) 2478 305.1 9.4e-80 gi|224091292|ref|XP_002195859.1| PREDICTED: hypoth ( 749) 2451 302.0 8.5e-79 gi|149736841|ref|XP_001491823.1| PREDICTED: regula ( 749) 2442 300.9 1.8e-78 gi|32172437|sp|P48380.2|RFX3_HUMAN RecName: Full=T ( 749) 2439 300.5 2.2e-78 gi|158260103|dbj|BAF82229.1| unnamed protein produ ( 749) 2439 300.5 2.2e-78 gi|109111667|ref|XP_001086729.1| PREDICTED: simila ( 749) 2435 300.1 3.1e-78 gi|73946688|ref|XP_533540.2| PREDICTED: similar to ( 749) 2434 300.0 3.4e-78 gi|67971974|dbj|BAE02329.1| unnamed protein produc ( 749) 2433 299.8 3.7e-78 gi|32172438|sp|P48381.2|RFX3_MOUSE RecName: Full=T ( 749) 2433 299.8 3.7e-78 gi|126335607|ref|XP_001364935.1| PREDICTED: simila ( 749) 2432 299.7 4e-78 gi|149062647|gb|EDM13070.1| rCG47137 [Rattus norve ( 749) 2430 299.5 4.7e-78 gi|111305724|gb|AAI21501.1| Rfx3 protein [Xenopus ( 783) 2428 299.3 5.7e-78 gi|114623634|ref|XP_001136079.1| PREDICTED: regula ( 724) 2424 298.8 7.5e-78 gi|26325973|dbj|BAC26730.1| unnamed protein produc ( 749) 2414 297.6 1.7e-77 gi|194034155|ref|XP_001925380.1| PREDICTED: regula ( 740) 2409 297.0 2.6e-77 gi|119900355|ref|XP_618263.3| PREDICTED: similar t ( 677) 2395 295.3 7.6e-77 gi|149412868|ref|XP_001506894.1| PREDICTED: simila ( 797) 2385 294.2 1.9e-76 gi|114623632|ref|XP_001136158.1| PREDICTED: regula ( 749) 2379 293.5 3e-76 gi|452404|emb|CAA53706.1| DNA binding protein RFX3 ( 707) 2378 293.3 3.1e-76 gi|109111669|ref|XP_001086606.1| PREDICTED: simila ( 673) 2374 292.8 4.2e-76 gi|74205536|dbj|BAE21069.1| unnamed protein produc ( 614) 2367 292.0 7e-76 gi|59861814|gb|AAH90314.1| Regulatory factor X, 2 ( 734) 2360 291.3 1.4e-75 gi|171846772|gb|AAI61512.1| Rfx2 protein [Xenopus ( 694) 2346 289.6 4.2e-75 gi|109111677|ref|XP_001086140.1| PREDICTED: simila ( 574) 2343 289.1 4.8e-75 gi|80479255|gb|AAI08518.1| MGC130921 protein [Xeno ( 694) 2331 287.8 1.4e-74 gi|73987045|ref|XP_868416.1| PREDICTED: similar to ( 702) 2330 287.7 1.6e-74 gi|149716393|ref|XP_001495252.1| PREDICTED: regula ( 702) 2313 285.7 6.2e-74 gi|73987043|ref|XP_868414.1| PREDICTED: similar to ( 654) 2312 285.5 6.4e-74 gi|114674883|ref|XP_001148654.1| PREDICTED: regula ( 690) 2304 284.6 1.3e-73 gi|149028165|gb|EDL83603.1| similar to DNA-binding ( 692) 2300 284.2 1.8e-73 gi|109123086|ref|XP_001086741.1| PREDICTED: regula ( 698) 2300 284.2 1.8e-73 gi|193785851|dbj|BAG51286.1| unnamed protein produ ( 653) 2297 283.8 2.2e-73 gi|119589522|gb|EAW69116.1| regulatory factor X, 2 ( 698) 2297 283.8 2.3e-73 gi|158255828|dbj|BAF83885.1| unnamed protein produ ( 698) 2295 283.6 2.7e-73 >>gi|132518|sp|P22670.1|RFX1_HUMAN RecName: Full=MHC cla (979 aa) initn: 6478 init1: 6478 opt: 6478 Z-score: 4128.0 bits: 775.3 E(): 0 Smith-Waterman score: 6478; 100.000% identity (100.000% similar) in 979 aa overlap (16-994:1-979) 10 20 30 40 50 60 hk0708 KKKKALFIIIFPTVGMATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT ::::::::::::::::::::::::::::::::::::::::::::: gi|132 MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT 10 20 30 40 70 80 90 100 110 120 hk0708 AAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 AAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV 50 60 70 80 90 100 130 140 150 160 170 180 hk0708 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN 110 120 130 140 150 160 190 200 210 220 230 240 hk0708 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT 170 180 190 200 210 220 250 260 270 280 290 300 hk0708 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQV 230 240 250 260 270 280 310 320 330 340 350 360 hk0708 PVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 PVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPA 290 300 310 320 330 340 370 380 390 400 410 420 hk0708 TSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 TSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG 350 360 370 380 390 400 430 440 450 460 470 480 hk0708 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL 410 420 430 440 450 460 490 500 510 520 530 540 hk0708 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ 470 480 490 500 510 520 550 560 570 580 590 600 hk0708 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD 530 540 550 560 570 580 610 620 630 640 650 660 hk0708 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ 590 600 610 620 630 640 670 680 690 700 710 720 hk0708 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS 650 660 670 680 690 700 730 740 750 760 770 780 hk0708 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL 710 720 730 740 750 760 790 800 810 820 830 840 hk0708 QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL 770 780 790 800 810 820 850 860 870 880 890 900 hk0708 DGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 DGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY 830 840 850 860 870 880 910 920 930 940 950 960 hk0708 MYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 MYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAA 890 900 910 920 930 940 970 980 990 hk0708 GGESPALGPETLEPPAKLARTDARGLFVQALPSS :::::::::::::::::::::::::::::::::: gi|132 GGESPALGPETLEPPAKLARTDARGLFVQALPSS 950 960 970 >>gi|119604793|gb|EAW84387.1| regulatory factor X, 1 (in (979 aa) initn: 6473 init1: 6473 opt: 6473 Z-score: 4124.8 bits: 774.7 E(): 0 Smith-Waterman score: 6473; 99.898% identity (100.000% similar) in 979 aa overlap (16-994:1-979) 10 20 30 40 50 60 hk0708 KKKKALFIIIFPTVGMATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT ::::::::::::::::::::::::::::::::::::::::::::: gi|119 MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT 10 20 30 40 70 80 90 100 110 120 hk0708 AAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV 50 60 70 80 90 100 130 140 150 160 170 180 hk0708 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN 110 120 130 140 150 160 190 200 210 220 230 240 hk0708 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT 170 180 190 200 210 220 250 260 270 280 290 300 hk0708 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQV 230 240 250 260 270 280 310 320 330 340 350 360 hk0708 PVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPA 290 300 310 320 330 340 370 380 390 400 410 420 hk0708 TSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|119 TSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG 350 360 370 380 390 400 430 440 450 460 470 480 hk0708 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL 410 420 430 440 450 460 490 500 510 520 530 540 hk0708 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ 470 480 490 500 510 520 550 560 570 580 590 600 hk0708 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD 530 540 550 560 570 580 610 620 630 640 650 660 hk0708 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ 590 600 610 620 630 640 670 680 690 700 710 720 hk0708 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS 650 660 670 680 690 700 730 740 750 760 770 780 hk0708 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL 710 720 730 740 750 760 790 800 810 820 830 840 hk0708 QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL 770 780 790 800 810 820 850 860 870 880 890 900 hk0708 DGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY 830 840 850 860 870 880 910 920 930 940 950 960 hk0708 MYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAA 890 900 910 920 930 940 970 980 990 hk0708 GGESPALGPETLEPPAKLARTDARGLFVQALPSS :::::::::::::::::::::::::::::::::: gi|119 GGESPALGPETLEPPAKLARTDARGLFVQALPSS 950 960 970 >>gi|114675711|ref|XP_524133.2| PREDICTED: regulatory fa (979 aa) initn: 6468 init1: 6468 opt: 6468 Z-score: 4121.6 bits: 774.1 E(): 0 Smith-Waterman score: 6468; 99.796% identity (100.000% similar) in 979 aa overlap (16-994:1-979) 10 20 30 40 50 60 hk0708 KKKKALFIIIFPTVGMATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT ::::::::::::::::::::::::::::::::::::::::::::: gi|114 MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT 10 20 30 40 70 80 90 100 110 120 hk0708 AAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV 50 60 70 80 90 100 130 140 150 160 170 180 hk0708 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN 110 120 130 140 150 160 190 200 210 220 230 240 hk0708 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT 170 180 190 200 210 220 250 260 270 280 290 300 hk0708 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQV 230 240 250 260 270 280 310 320 330 340 350 360 hk0708 PVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|114 PVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTAAQVSTPA 290 300 310 320 330 340 370 380 390 400 410 420 hk0708 TSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|114 TSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG 350 360 370 380 390 400 430 440 450 460 470 480 hk0708 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL 410 420 430 440 450 460 490 500 510 520 530 540 hk0708 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ 470 480 490 500 510 520 550 560 570 580 590 600 hk0708 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD 530 540 550 560 570 580 610 620 630 640 650 660 hk0708 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ 590 600 610 620 630 640 670 680 690 700 710 720 hk0708 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS 650 660 670 680 690 700 730 740 750 760 770 780 hk0708 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL 710 720 730 740 750 760 790 800 810 820 830 840 hk0708 QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL 770 780 790 800 810 820 850 860 870 880 890 900 hk0708 DGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY 830 840 850 860 870 880 910 920 930 940 950 960 hk0708 MYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAA 890 900 910 920 930 940 970 980 990 hk0708 GGESPALGPETLEPPAKLARTDARGLFVQALPSS :::::::::::::::::::::::::::::::::: gi|114 GGESPALGPETLEPPAKLARTDARGLFVQALPSS 950 960 970 >>gi|73986799|ref|XP_542024.2| PREDICTED: similar to MHC (973 aa) initn: 4017 init1: 3879 opt: 6117 Z-score: 3898.8 bits: 732.9 E(): 2.1e-208 Smith-Waterman score: 6117; 95.204% identity (98.061% similar) in 980 aa overlap (16-994:1-973) 10 20 30 40 50 hk0708 KKKKALFIIIFPTVGMATQAY-TELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPP ::: :: ::::::: ::::::: :: ::::::::::::::: gi|739 MATPAYVTELQAAPQPSQPPQAQPQ-----PPPPPPAAPQPPQPP 10 20 30 40 60 70 80 90 100 110 hk0708 TAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVT ..:::::::::::::::::::::::.::::::::::.:.::::.:::::::: ::::::: gi|739 ATAATPQPQYVTELQSPQPQAQPPGSQKQYVTELPATPTPSQPAGAPTPSPASQQYIVVT 50 60 70 80 90 100 120 130 140 150 160 170 hk0708 VSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT 110 120 130 140 150 160 180 190 200 210 220 230 hk0708 NIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAP :: :::::::::::::::.::::::::::::::::::::::::.:::::::::::::::: gi|739 NIPVPQQALPTQRLVVQSTAPGSKGGQVSLTVHGTQQVHSPPERSPVQANSSSSKTAGAP 170 180 190 200 210 220 240 250 260 270 280 290 hk0708 TGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQ :::::::::::::::::::::::::::::::::: :::: :::::::::::::::::::: gi|739 TGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKAGPVQQLTVQGLQPVHVAQEVQQLQQ 230 240 250 260 270 280 300 310 320 330 340 350 hk0708 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTP ::::::::::::::::::::::::::::::: :::::::::::.::::::::::.::::: gi|739 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYPYPETPLYTQTAGTSYYEAAGTAAQVSTP 290 300 310 320 330 340 360 370 380 390 400 410 hk0708 ATSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTG :::::::::::.::::::::::.::.:.:.::::::.:. :::::::::::::.:.:: : gi|739 ATSQAVASSGSVPMYVSGSQVVTSSTSSGGGASNSSSGS-SGGGGGGGGGGGGSGGGS-G 350 360 370 380 390 420 430 440 450 460 470 hk0708 GGGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GGSSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL 400 410 420 430 440 450 480 490 500 510 520 530 hk0708 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ 460 470 480 490 500 510 540 550 560 570 580 590 hk0708 QHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLP :::::::::::::::::::::::::::::::: : .:::::::::::::::::::::::: gi|739 QHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGPQQATGLSDISAQVQQYQQFLDASRSLP 520 530 540 550 560 570 600 610 620 630 640 650 hk0708 DFTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DFSELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS 580 590 600 610 620 630 660 670 680 690 700 710 hk0708 QPSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIP ::.:::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|739 QPNEAPPLAVHDEAEKRLPKASLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIP 640 650 660 670 680 690 720 730 740 750 760 770 hk0708 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV 700 710 720 730 740 750 780 790 800 810 820 830 hk0708 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW 760 770 780 790 800 810 840 850 860 870 880 890 hk0708 LDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE 820 830 840 850 860 870 900 910 920 930 940 950 hk0708 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA ::::::::::::::::::::::::::::.:::::::::::::::.:::.::::::::::: gi|739 YMYYLIEHRVAQAKGETPIAVMGEFANLTTSLNPLDPDKDEEEEKEEENEDELPQDISLA 880 890 900 910 920 930 960 970 980 990 hk0708 AGGESPALGPETLEPPAKLARTDARGLFVQALPSS ::::::::::..::::::::::::::::::::::: gi|739 AGGESPALGPDALEPPAKLARTDARGLFVQALPSS 940 950 960 970 >>gi|149037880|gb|EDL92240.1| regulatory factor X, 1 (in (964 aa) initn: 3686 init1: 2719 opt: 5537 Z-score: 3530.5 bits: 664.7 E(): 6.9e-188 Smith-Waterman score: 5864; 92.449% identity (96.939% similar) in 980 aa overlap (16-994:1-964) 10 20 30 40 50 hk0708 KKKKALFIIIFPTVGMATQAY-TELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPP ::::.: ::::::: :::::::::: :::: :::::::: gi|149 MATQSYVTELQAAPQASQPPQAPPQALPQPP---PPAAPQPP--- 10 20 30 60 70 80 90 100 110 hk0708 TAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVT :::::::::::::::::::.::::.:::::.::::.::::::. .:.:::. ::::::: gi|149 -AAATPQPQYVTELQSPQPQTQPPGSQKQYVAELPAAPAPSQPA-TPAPSPVAQQYIVVT 40 50 60 70 80 90 120 130 140 150 160 170 hk0708 VSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT :::::::::::::::::.::::::::::::::::::::::::::.::::::::::::::: gi|149 VSEGAMRASETVSEASPSSTASQTGVPTQVVQQVQGTQQRLLVQASVQAKPGHVSPLQLT 100 110 120 130 140 150 180 190 200 210 220 230 hk0708 NIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAP ::::::::::::.::::: ::::::::::::::.:::::: ::.::::::.:.:::::.: gi|149 NIQVPQQALPTQHLVVQSPAPGSKGGQVSLTVHSTQQVHSAPERSPVQANNSTSKTAGTP 160 170 180 190 200 210 240 250 260 270 280 290 hk0708 TGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQ .::: ::::::.:::::::::::::::::::. : :::: :::::::::::::::::: : gi|149 AGTV-QQLQVHSVQQSVPVTQERSVVQATPQT-KAGPVQQLTVQGLQPVHVAQEVQQLPQ 220 230 240 250 260 270 300 310 320 330 340 350 hk0708 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTP :::::::::::::::::::::::::::::::.:::::.:::::.::::::.:::.::::: gi|149 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYQYPETPIYTQTAGTSYYEASGTAAQVSTP 280 290 300 310 320 330 360 370 380 390 400 410 hk0708 ATSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTG ::::.::::::.::::::: .::::.:. ::::::: : .::.::::.::::::: . gi|149 ATSQTVASSGSVPMYVSGSPIVASSSSSEAGASNSSVG--AGGNGGGGSGGGGGGS---S 340 350 360 370 380 390 420 430 440 450 460 470 hk0708 GGGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|149 GGGSGAGTYVIQGGYMLGNASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL 400 410 420 430 440 450 480 490 500 510 520 530 hk0708 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ 460 470 480 490 500 510 540 550 560 570 580 590 hk0708 QHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLP ::::::::::::::::::::::::..:::::::: ::::::::::::::::::::::::: gi|149 QHMAMRGQPFSQKQRLKPIQKMEGVANGVAVGQQ-STGLSDISAQVQQYQQFLDASRSLP 520 530 540 550 560 600 610 620 630 640 650 hk0708 DFTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DFAELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS 570 580 590 600 610 620 660 670 680 690 700 710 hk0708 QPSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIP ::.::::::::::::::::.: :::::::.:::::::::::::::::::::::::::::: gi|149 QPNEAPPLAVHDEAEKRLPRASLVLLSKFQPVLQWTKHCDNVLYQGLVEILIPDVLRPIP 630 640 650 660 670 680 720 730 740 750 760 770 hk0708 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV 690 700 710 720 730 740 780 790 800 810 820 830 hk0708 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW 750 760 770 780 790 800 840 850 860 870 880 890 hk0708 LDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 LDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE 810 820 830 840 850 860 900 910 920 930 940 950 hk0708 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA 870 880 890 900 910 920 960 970 980 990 hk0708 AGGESPALGPETLEPPAKLARTDARGLFVQALPSS ::.::::::::::::::::::::.::::::::::: gi|149 AGSESPALGPETLEPPAKLARTDTRGLFVQALPSS 930 940 950 960 >>gi|34784952|gb|AAH57018.1| Regulatory factor X, 1 (inf (963 aa) initn: 3802 init1: 2718 opt: 4803 Z-score: 3064.4 bits: 578.5 E(): 6.3e-162 Smith-Waterman score: 5811; 91.633% identity (96.837% similar) in 980 aa overlap (16-994:1-963) 10 20 30 40 50 hk0708 KKKKALFIIIFPTVGMATQAY-TELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPP ::::.: ::::::: :::::::::: :::: :::::::: gi|347 MATQSYVTELQAAPQASQPPQAPPQALPQPP---PPAAPQPP--- 10 20 30 60 70 80 90 100 110 hk0708 TAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVT :::::::::::::::::::.::::.:::::.::::.::::::. .:.:::. ::::::: gi|347 -AAATPQPQYVTELQSPQPQTQPPGSQKQYVAELPAAPAPSQPA-TPAPSPVAQQYIVVT 40 50 60 70 80 90 120 130 140 150 160 170 hk0708 VSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT :::::::::::::::::.::::::::::::::::::::::::::.::::::::::::::: gi|347 VSEGAMRASETVSEASPSSTASQTGVPTQVVQQVQGTQQRLLVQASVQAKPGHVSPLQLT 100 110 120 130 140 150 180 190 200 210 220 230 hk0708 NIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAP ::::::::.:::.::::: :::.:.::::::::..::::: ::.::::::.:.:::::.: gi|347 NIQVPQQAIPTQHLVVQSPAPGTKSGQVSLTVHSAQQVHSAPERSPVQANNSTSKTAGTP 160 170 180 190 200 210 240 250 260 270 280 290 hk0708 TGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQ ..:: ::::::.:::::::::::::::::::. : :::: :::::::::::::::::: : gi|347 AATV-QQLQVHSVQQSVPVTQERSVVQATPQT-KAGPVQQLTVQGLQPVHVAQEVQQLPQ 220 230 240 250 260 270 300 310 320 330 340 350 hk0708 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTP :::::::::::::::::::::::::::::::.:::::.:::::.::::::.:::.::::: gi|347 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYQYPETPIYTQTAGTSYYEASGTAAQVSTP 280 290 300 310 320 330 360 370 380 390 400 410 hk0708 ATSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTG ::::.::::::.::::::: .::::.:. ::::::: :.::.::::..::::: : gi|347 ATSQTVASSGSVPMYVSGSPIVASSSSSEAGASNSS----VGAGGNGGGGSSGGGSG--G 340 350 360 370 380 420 430 440 450 460 470 hk0708 GGGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL ..::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|347 SSGSGAGTYVIQGGYMLGNASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL 390 400 410 420 430 440 480 490 500 510 520 530 hk0708 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ 450 460 470 480 490 500 540 550 560 570 580 590 hk0708 QHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLP ::::::::::::::::::::::::..:::::::: ::::::::::::::::::::::::: gi|347 QHMAMRGQPFSQKQRLKPIQKMEGVANGVAVGQQ-STGLSDISAQVQQYQQFLDASRSLP 510 520 530 540 550 560 600 610 620 630 640 650 hk0708 DFTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 DFAELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS 570 580 590 600 610 620 660 670 680 690 700 710 hk0708 QPSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIP :::::::::::::::::::.: :::::::.:::::::::::::::::::::::::::::: gi|347 QPSEAPPLAVHDEAEKRLPRASLVLLSKFQPVLQWTKHCDNVLYQGLVEILIPDVLRPIP 630 640 650 660 670 680 720 730 740 750 760 770 hk0708 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV 690 700 710 720 730 740 780 790 800 810 820 830 hk0708 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW 750 760 770 780 790 800 840 850 860 870 880 890 hk0708 LDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|347 LDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE 810 820 830 840 850 860 900 910 920 930 940 950 hk0708 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA 870 880 890 900 910 920 960 970 980 990 hk0708 AGGESPALGPETLEPPAKLARTDARGLFVQALPSS ::.::::::::.:::::::::::.::::::::::: gi|347 AGSESPALGPEALEPPAKLARTDTRGLFVQALPSS 930 940 950 960 >>gi|26350635|dbj|BAC38954.1| unnamed protein product [M (963 aa) initn: 3797 init1: 2714 opt: 4802 Z-score: 3063.7 bits: 578.3 E(): 6.9e-162 Smith-Waterman score: 5801; 91.429% identity (96.837% similar) in 980 aa overlap (16-994:1-963) 10 20 30 40 50 hk0708 KKKKALFIIIFPTVGMATQAY-TELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPP ::::.: ::::::: :::::::::: :::: :::::::: gi|263 MATQSYVTELQAAPQASQPPQAPPQALPQPP---PPAAPQPP--- 10 20 30 60 70 80 90 100 110 hk0708 TAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVT :::::::::::::::::::.::::.:::::.::::.::::::. .:.:::. .:::::: gi|263 -AAATPQPQYVTELQSPQPQTQPPGSQKQYVAELPAAPAPSQPA-TPAPSPVAHQYIVVT 40 50 60 70 80 90 120 130 140 150 160 170 hk0708 VSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT :::::::::::::::::.::::::::::::::::::::::::::.::::::::::::::: gi|263 VSEGAMRASETVSEASPSSTASQTGVPTQVVQQVQGTQQRLLVQASVQAKPGHVSPLQLT 100 110 120 130 140 150 180 190 200 210 220 230 hk0708 NIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAP ::::::::.:::.::::: :::.:.::::::::..::::: ::.::::::.:.:::::.: gi|263 NIQVPQQAIPTQHLVVQSPAPGTKSGQVSLTVHSAQQVHSAPERSPVQANNSTSKTAGTP 160 170 180 190 200 210 240 250 260 270 280 290 hk0708 TGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQ ..:: ::::::.:::::::::::::::::::. : :::: :::::::::::::::::: : gi|263 AATV-QQLQVHSVQQSVPVTQERSVVQATPQT-KAGPVQQLTVQGLQPVHVAQEVQQLPQ 220 230 240 250 260 270 300 310 320 330 340 350 hk0708 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTP :::::::::::::::::::::::::::::::.:::::.:::::.::::::.:::.::::: gi|263 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYQYPETPIYTQTAGTSYYEASGTAAQVSTP 280 290 300 310 320 330 360 370 380 390 400 410 hk0708 ATSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTG ::::.::::::.::::::: .::::.:. ::::::: :.::.::::..::::: : gi|263 ATSQTVASSGSVPMYVSGSPIVASSSSSEAGASNSS----VGAGGNGGGGSSGGGSG--G 340 350 360 370 380 420 430 440 450 460 470 hk0708 GGGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL ..::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|263 SSGSGAGTYVIQGGYMLGNASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL 390 400 410 420 430 440 480 490 500 510 520 530 hk0708 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ 450 460 470 480 490 500 540 550 560 570 580 590 hk0708 QHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLP ::::::::::::::::::::::::..:::::::: ::::::::::::::::::::::::: gi|263 QHMAMRGQPFSQKQRLKPIQKMEGVANGVAVGQQ-STGLSDISAQVQQYQQFLDASRSLP 510 520 530 540 550 560 600 610 620 630 640 650 hk0708 DFTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DFAELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS 570 580 590 600 610 620 660 670 680 690 700 710 hk0708 QPSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIP :::::::::::::::::::.: :::::::.:::::::::::::::::::::::::::::: gi|263 QPSEAPPLAVHDEAEKRLPRASLVLLSKFQPVLQWTKHCDNVLYQGLVEILIPDVLRPIP 630 640 650 660 670 680 720 730 740 750 760 770 hk0708 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV 690 700 710 720 730 740 780 790 800 810 820 830 hk0708 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|263 LQNTAQINQMLSDLNRVDYANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW 750 760 770 780 790 800 840 850 860 870 880 890 hk0708 LDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|263 LDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE 810 820 830 840 850 860 900 910 920 930 940 950 hk0708 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA 870 880 890 900 910 920 960 970 980 990 hk0708 AGGESPALGPETLEPPAKLARTDARGLFVQALPSS ::.::::::::.:::::::::::.::::::::::: gi|263 AGSESPALGPEALEPPAKLARTDTRGLFVQALPSS 930 940 950 960 >>gi|1350582|sp|P48377.1|RFX1_MOUSE RecName: Full=MHC cl (963 aa) initn: 3802 init1: 2718 opt: 4798 Z-score: 3061.2 bits: 577.9 E(): 9.5e-162 Smith-Waterman score: 5803; 91.531% identity (96.735% similar) in 980 aa overlap (16-994:1-963) 10 20 30 40 50 hk0708 KKKKALFIIIFPTVGMATQAY-TELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPP ::::.: ::::::: :::::::::: :::: :::::::: gi|135 MATQSYVTELQAAPQASQPPQAPPQALPQPP---PPAAPQPP--- 10 20 30 60 70 80 90 100 110 hk0708 TAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVT :::::::::::::::::::.::::.:::::.::::.::::::. .:.:::. ::::::: gi|135 -AAATPQPQYVTELQSPQPQTQPPGSQKQYVAELPAAPAPSQPA-TPAPSPVAQQYIVVT 40 50 60 70 80 90 120 130 140 150 160 170 hk0708 VSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT :::::::::::::::::.::::::::::::::::::::::::::.::::::::::::::: gi|135 VSEGAMRASETVSEASPSSTASQTGVPTQVVQQVQGTQQRLLVQASVQAKPGHVSPLQLT 100 110 120 130 140 150 180 190 200 210 220 230 hk0708 NIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAP ::::::::.::. ::::: :::.:.::::::::..::::: ::.::::::.:.:::::.: gi|135 NIQVPQQAIPTHDLVVQSPAPGTKSGQVSLTVHSAQQVHSAPERSPVQANNSTSKTAGTP 160 170 180 190 200 210 240 250 260 270 280 290 hk0708 TGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQ ..:: ::::::.:::::::::::::::::::. : :::: :::::::::::::::::: : gi|135 AATV-QQLQVHSVQQSVPVTQERSVVQATPQT-KAGPVQQLTVQGLQPVHVAQEVQQLPQ 220 230 240 250 260 270 300 310 320 330 340 350 hk0708 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTP :::::::::::::::::::::::::::::::.:::::.:::::.::::::.:::.::::: gi|135 VPVPHVYSSQVQYVEGGDASYTASAIRSSTYQYPETPIYTQTAGTSYYEASGTAAQVSTP 280 290 300 310 320 330 360 370 380 390 400 410 hk0708 ATSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTG ::::.::::::.::::::: .::::.:. ::::::: :.::.::::..::::: : gi|135 ATSQTVASSGSVPMYVSGSPIVASSSSSEAGASNSS----VGAGGNGGGGSSGGGSG--G 340 350 360 370 380 420 430 440 450 460 470 hk0708 GGGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL ..::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|135 SSGSGAGTYVIQGGYMLGNASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYL 390 400 410 420 430 440 480 490 500 510 520 530 hk0708 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 LHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQ 450 460 470 480 490 500 540 550 560 570 580 590 hk0708 QHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLP ::::::::::::::::::::::::..:::::::: ::::::::::::::::::::::::: gi|135 QHMAMRGQPFSQKQRLKPIQKMEGVANGVAVGQQ-STGLSDISAQVQQYQQFLDASRSLP 510 520 530 540 550 560 600 610 620 630 640 650 hk0708 DFTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 DFAELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLS 570 580 590 600 610 620 660 670 680 690 700 710 hk0708 QPSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIP :::::::::::::::::::.: :::::::.:::::::::::::::::::::::::::::: gi|135 QPSEAPPLAVHDEAEKRLPRASLVLLSKFQPVLQWTKHCDNVLYQGLVEILIPDVLRPIP 630 640 650 660 670 680 720 730 740 750 760 770 hk0708 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 SALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAV 690 700 710 720 730 740 780 790 800 810 820 830 hk0708 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 LQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAW 750 760 770 780 790 800 840 850 860 870 880 890 hk0708 LDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|135 LDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE 810 820 830 840 850 860 900 910 920 930 940 950 hk0708 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 YMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLA 870 880 890 900 910 920 960 970 980 990 hk0708 AGGESPALGPETLEPPAKLARTDARGLFVQALPSS ::.::::::::.:::::::::::.::::::::::: gi|135 AGSESPALGPEALEPPAKLARTDTRGLFVQALPSS 930 940 950 960 >>gi|109123701|ref|XP_001111344.1| PREDICTED: regulatory (809 aa) initn: 4704 init1: 4704 opt: 4704 Z-score: 3002.3 bits: 566.7 E(): 1.8e-158 Smith-Waterman score: 4704; 95.929% identity (98.100% similar) in 737 aa overlap (16-752:1-737) 10 20 30 40 50 60 hk0708 KKKKALFIIIFPTVGMATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT ::::::::::::::::::::::::::::::::::::::::::::: gi|109 MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPT 10 20 30 40 70 80 90 100 110 120 hk0708 AAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|109 AAATPQPQYVTELQSPQPQAQPPGSQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTV 50 60 70 80 90 100 130 140 150 160 170 180 hk0708 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTN 110 120 130 140 150 160 190 200 210 220 230 240 hk0708 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT 170 180 190 200 210 220 250 260 270 280 290 300 hk0708 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQV ::::::::::::::::::::::::::::::::: :::::::::::::::::::: ..:.. gi|109 GTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKAGPVQPLTVQGLQPVHVAQEVVRIQRI 230 240 250 260 270 280 310 320 330 340 350 360 hk0708 PVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPA : :... . ..: :.. .: ::::: ::::::::::::::::::::::.:::::: gi|109 PQVLVFGTAATALKGPDGALQRGACRSSTYPYPETPLYTQTASTSYYEAAGTAAQVSTPA 290 300 310 320 330 340 370 380 390 400 410 420 hk0708 TSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|109 TSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG 350 360 370 380 390 400 430 440 450 460 470 480 hk0708 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLL 410 420 430 440 450 460 490 500 510 520 530 540 hk0708 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQ 470 480 490 500 510 520 550 560 570 580 590 600 hk0708 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPD 530 540 550 560 570 580 610 620 630 640 650 660 hk0708 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQ 590 600 610 620 630 640 670 680 690 700 710 720 hk0708 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPS 650 660 670 680 690 700 730 740 750 760 770 780 hk0708 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVL :::::::::::::::::::::::::::::::: gi|109 ALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKPEKGALPGPAVGRAAGGTASSFQRAAGR 710 720 730 740 750 760 790 800 810 820 830 840 hk0708 QNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWL gi|109 GAGECPQTPAPAPPLRRWFVMEPFLCPYLPGDCASPPCRATPTP 770 780 790 800 >>gi|26332070|dbj|BAC29765.1| unnamed protein product [M (695 aa) initn: 3382 init1: 2718 opt: 4331 Z-score: 2766.2 bits: 522.8 E(): 2.6e-145 Smith-Waterman score: 4331; 94.587% identity (98.291% similar) in 702 aa overlap (293-994:1-695) 270 280 290 300 310 320 hk0708 SVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEGGDASYTA ::::: :::::::::::::::::::::::: gi|263 EVQQLPQVPVPHVYSSQVQYVEGGDASYTA 10 20 30 330 340 350 360 370 380 hk0708 SAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPATSQAVASSGSMPMYVSGSQVVA ::::::::.:::::.:::::.::::::.:::.:::::::::.::::::.::::::: .:: gi|263 SAIRSSTYQYPETPIYTQTAGTSYYEASGTAAQVSTPATSQTVASSGSVPMYVSGSPIVA 40 50 60 70 80 90 390 400 410 420 430 440 hk0708 SSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQS ::.:. ::::::: :.::.::::..::::: :..::::::::::::::::.:::: gi|263 SSSSSEAGASNSS----VGAGGNGGGGSSGGGSG--GSSGSGAGTYVIQGGYMLGNASQS 100 110 120 130 140 450 460 470 480 490 500 hk0708 YSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSV 150 160 170 180 190 200 510 520 530 540 550 560 hk0708 FMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKME 210 220 230 240 250 260 570 580 590 600 610 620 hk0708 GMTNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPDFTELDLQGKVLPEGVGPGDIKA :..:::::::: :::::::::::::::::::::::::::.:::::::::::::::::::: gi|263 GVANGVAVGQQ-STGLSDISAQVQQYQQFLDASRSLPDFAELDLQGKVLPEGVGPGDIKA 270 280 290 300 310 320 630 640 650 660 670 680 hk0708 FQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAIL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: : gi|263 FQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPRASL 330 340 350 360 370 380 690 700 710 720 730 740 hk0708 VLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMV ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VLLSKFQPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMV 390 400 410 420 430 440 750 760 770 780 790 800 hk0708 NIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQ 450 460 470 480 490 500 810 820 830 840 850 860 hk0708 EQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAK ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|263 EQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSSGFPKAAK 510 520 530 540 550 560 870 880 890 900 910 920 hk0708 LFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG 570 580 590 600 610 620 930 940 950 960 970 980 hk0708 EFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPETLEPPAKLARTD :::::::::::::::::::::::::::::::::::::::.::::::::.::::::::::: gi|263 EFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGSESPALGPEALEPPAKLARTD 630 640 650 660 670 680 990 hk0708 ARGLFVQALPSS .::::::::::: gi|263 TRGLFVQALPSS 690 994 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 16:34:35 2009 done: Thu Jun 18 16:37:18 2009 Total Scan time: 1398.920 Total Display time: 0.570 Function used was FASTA [version 34.26.5 April 26, 2007]